This file is indexed.

/usr/include/ncbi/alignloc.h is in libncbi6-dev 6.1.20110713-3ubuntu2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
/***********************************************************************
*
**
*        Automatic header module from ASNTOOL
*
************************************************************************/

#ifndef _ASNTOOL_
#include <asn.h>
#endif

static char * asnfilename = "alignloc.h11";
static AsnValxNode avnx[7] = {
    {20,"unk" ,0,0.0,&avnx[1] } ,
    {20,"gt" ,1,0.0,&avnx[2] } ,
    {20,"lt" ,2,0.0,&avnx[3] } ,
    {20,"tr" ,3,0.0,&avnx[4] } ,
    {20,"tl" ,4,0.0,&avnx[5] } ,
    {20,"circle" ,5,0.0,&avnx[6] } ,
    {20,"other" ,255,0.0,NULL } };

static AsnType atx[99] = {
  {401, "Align-loc-set" ,1,0,0,0,0,1,0,0,NULL,&atx[33],&atx[1],0,&atx[2]} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
  {402, "Align-loc" ,1,0,0,0,0,1,0,0,NULL,&atx[24],&atx[3],0,&atx[4]} ,
  {0, "id" ,128,0,0,1,0,0,0,0,NULL,&atx[4],NULL,0,&atx[15]} ,
  {403, "Align-id" ,1,0,0,0,0,1,0,0,NULL,&atx[12],&atx[5],0,&atx[6]} ,
  {0, "id" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[13]} ,
  {404, "Object-id" ,1,0,0,0,0,0,1,0,NULL,&atx[7],NULL,0,&atx[19]} ,
  {403, "Object-id" ,1,0,0,0,0,1,0,0,NULL,&atx[12],&atx[8],0,&atx[44]} ,
  {0, "id" ,128,0,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[10]} ,
  {302, "INTEGER" ,0,2,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "str" ,128,1,0,0,0,0,0,0,NULL,&atx[11],NULL,0,NULL} ,
  {323, "VisibleString" ,0,26,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {315, "CHOICE" ,0,-1,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "itemid" ,128,1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[14]} ,
  {0, "gi" ,128,2,0,0,0,0,0,0,NULL,&atx[9],NULL,0,NULL} ,
  {0, "loc" ,128,1,0,0,0,0,0,0,NULL,&atx[12],&atx[16],0,NULL} ,
  {0, "whole" ,128,0,0,0,0,0,0,0,NULL,&atx[17],NULL,0,&atx[18]} ,
  {305, "NULL" ,0,5,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "box" ,128,1,0,0,0,0,0,0,NULL,&atx[19],NULL,0,&atx[25]} ,
  {405, "Align-box" ,1,0,0,0,0,0,0,0,NULL,&atx[24],&atx[20],0,&atx[26]} ,
  {0, "row-from" ,128,0,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[21]} ,
  {0, "row-to" ,128,1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[22]} ,
  {0, "column-from" ,128,2,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[23]} ,
  {0, "column-to" ,128,3,0,0,0,0,0,0,NULL,&atx[9],NULL,0,NULL} ,
  {311, "SEQUENCE" ,0,16,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "rows" ,128,2,0,0,0,0,0,0,NULL,&atx[26],NULL,0,&atx[29]} ,
  {406, "Align-rows" ,1,0,0,0,0,0,0,0,NULL,&atx[24],&atx[27],0,&atx[30]} ,
  {0, "from" ,128,0,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[28]} ,
  {0, "to" ,128,1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,NULL} ,
  {0, "columns" ,128,3,0,0,0,0,0,0,NULL,&atx[30],NULL,0,NULL} ,
  {407, "Align-columns" ,1,0,0,0,0,0,0,0,NULL,&atx[24],&atx[31],0,NULL} ,
  {0, "from" ,128,0,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[32]} ,
  {0, "to" ,128,1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,NULL} ,
  {312, "SEQUENCE OF" ,0,16,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {401, "Date" ,1,0,0,0,0,1,0,0,NULL,&atx[12],&atx[35],0,&atx[42]} ,
  {0, "str" ,128,0,0,0,0,0,0,0,NULL,&atx[11],NULL,0,&atx[36]} ,
  {0, "std" ,128,1,0,0,0,0,0,0,NULL,&atx[37],NULL,0,NULL} ,
  {407, "Date-std" ,1,0,0,0,0,0,0,0,NULL,&atx[24],&atx[38],0,&atx[48]} ,
  {0, "year" ,128,0,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[39]} ,
  {0, "month" ,128,1,0,1,0,0,0,0,NULL,&atx[9],NULL,0,&atx[40]} ,
  {0, "day" ,128,2,0,1,0,0,0,0,NULL,&atx[9],NULL,0,&atx[41]} ,
  {0, "season" ,128,3,0,1,0,0,0,0,NULL,&atx[11],NULL,0,NULL} ,
  {402, "Person-id" ,1,0,0,0,0,1,0,0,NULL,&atx[12],&atx[43],0,&atx[7]} ,
  {0, "dbtag" ,128,0,0,0,0,0,0,0,NULL,&atx[44],NULL,0,&atx[47]} ,
  {404, "Dbtag" ,1,0,0,0,0,1,0,0,NULL,&atx[24],&atx[45],0,&atx[58]} ,
  {0, "db" ,128,0,0,0,0,0,0,0,NULL,&atx[11],NULL,0,&atx[46]} ,
  {0, "tag" ,128,1,0,0,0,0,0,0,NULL,&atx[7],NULL,0,NULL} ,
  {0, "name" ,128,1,0,0,0,0,0,0,NULL,&atx[48],NULL,0,&atx[56]} ,
  {408, "Name-std" ,1,0,0,0,0,0,0,0,NULL,&atx[24],&atx[49],0,&atx[74]} ,
  {0, "last" ,128,0,0,0,0,0,0,0,NULL,&atx[11],NULL,0,&atx[50]} ,
  {0, "first" ,128,1,0,1,0,0,0,0,NULL,&atx[11],NULL,0,&atx[51]} ,
  {0, "middle" ,128,2,0,1,0,0,0,0,NULL,&atx[11],NULL,0,&atx[52]} ,
  {0, "full" ,128,3,0,1,0,0,0,0,NULL,&atx[11],NULL,0,&atx[53]} ,
  {0, "initials" ,128,4,0,1,0,0,0,0,NULL,&atx[11],NULL,0,&atx[54]} ,
  {0, "suffix" ,128,5,0,1,0,0,0,0,NULL,&atx[11],NULL,0,&atx[55]} ,
  {0, "title" ,128,6,0,1,0,0,0,0,NULL,&atx[11],NULL,0,NULL} ,
  {0, "ml" ,128,2,0,0,0,0,0,0,NULL,&atx[11],NULL,0,&atx[57]} ,
  {0, "str" ,128,3,0,0,0,0,0,0,NULL,&atx[11],NULL,0,NULL} ,
  {405, "Int-fuzz" ,1,0,0,0,0,1,0,0,NULL,&atx[12],&atx[59],0,&atx[69]} ,
  {0, "p-m" ,128,0,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[60]} ,
  {0, "range" ,128,1,0,0,0,0,0,0,NULL,&atx[24],&atx[61],0,&atx[63]} ,
  {0, "max" ,128,0,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[62]} ,
  {0, "min" ,128,1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,NULL} ,
  {0, "pct" ,128,2,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[64]} ,
  {0, "lim" ,128,3,0,0,0,0,0,0,NULL,&atx[65],&avnx[0],0,&atx[66]} ,
  {310, "ENUMERATED" ,0,10,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "alt" ,128,4,0,0,0,0,0,0,NULL,&atx[68],&atx[67],0,NULL} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,NULL} ,
  {314, "SET OF" ,0,17,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {406, "User-object" ,1,0,0,0,0,1,0,0,NULL,&atx[24],&atx[70],0,&atx[37]} ,
  {0, "class" ,128,0,0,1,0,0,0,0,NULL,&atx[11],NULL,0,&atx[71]} ,
  {0, "type" ,128,1,0,0,0,0,0,0,NULL,&atx[7],NULL,0,&atx[72]} ,
  {0, "data" ,128,2,0,0,0,0,0,0,NULL,&atx[33],&atx[73],0,NULL} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[74],NULL,0,NULL} ,
  {409, "User-field" ,1,0,0,0,0,0,0,0,NULL,&atx[24],&atx[75],0,NULL} ,
  {0, "label" ,128,0,0,0,0,0,0,0,NULL,&atx[7],NULL,0,&atx[76]} ,
  {0, "num" ,128,1,0,1,0,0,0,0,NULL,&atx[9],NULL,0,&atx[77]} ,
  {0, "data" ,128,2,0,0,0,0,0,0,NULL,&atx[12],&atx[78],0,NULL} ,
  {0, "str" ,128,0,0,0,0,0,0,0,NULL,&atx[11],NULL,0,&atx[79]} ,
  {0, "int" ,128,1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,&atx[80]} ,
  {0, "real" ,128,2,0,0,0,0,0,0,NULL,&atx[81],NULL,0,&atx[82]} ,
  {309, "REAL" ,0,9,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "bool" ,128,3,0,0,0,0,0,0,NULL,&atx[83],NULL,0,&atx[84]} ,
  {301, "BOOLEAN" ,0,1,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "os" ,128,4,0,0,0,0,0,0,NULL,&atx[85],NULL,0,&atx[86]} ,
  {304, "OCTET STRING" ,0,4,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
  {0, "object" ,128,5,0,0,0,0,0,0,NULL,&atx[69],NULL,0,&atx[87]} ,
  {0, "strs" ,128,6,0,0,0,0,0,0,NULL,&atx[33],&atx[88],0,&atx[89]} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[11],NULL,0,NULL} ,
  {0, "ints" ,128,7,0,0,0,0,0,0,NULL,&atx[33],&atx[90],0,&atx[91]} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[9],NULL,0,NULL} ,
  {0, "reals" ,128,8,0,0,0,0,0,0,NULL,&atx[33],&atx[92],0,&atx[93]} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[81],NULL,0,NULL} ,
  {0, "oss" ,128,9,0,0,0,0,0,0,NULL,&atx[33],&atx[94],0,&atx[95]} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[85],NULL,0,NULL} ,
  {0, "fields" ,128,10,0,0,0,0,0,0,NULL,&atx[33],&atx[96],0,&atx[97]} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[74],NULL,0,NULL} ,
  {0, "objects" ,128,11,0,0,0,0,0,0,NULL,&atx[33],&atx[98],0,NULL} ,
  {0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[69],NULL,0,NULL} };

static AsnModule ampx[2] = {
  { "NCBI-Alignloc" , "alignloc.h11",&atx[0],NULL,&ampx[1],0,0} ,
  { "NCBI-General" , "60",&atx[34],NULL,NULL,0,0} };

static AsnValxNodePtr avn = avnx;
static AsnTypePtr at = atx;
static AsnModulePtr amp = ampx;



/**************************************************
*
*    Defines for Module NCBI-Alignloc
*
**************************************************/

#define ALIGN_LOC_SET &at[0]
#define ALIGN_LOC_SET_E &at[1]

#define ALIGN_LOC &at[2]
#define ALIGN_LOC_id &at[3]
#define ALIGN_LOC_loc &at[15]
#define ALIGN_LOC_loc_whole &at[16]
#define ALIGN_LOC_loc_box &at[18]
#define ALIGN_LOC_loc_rows &at[25]
#define ALIGN_LOC_loc_columns &at[29]

#define ALIGN_ID &at[4]
#define ALIGN_ID_id &at[5]
#define ALIGN_ID_itemid &at[13]
#define ALIGN_ID_gi &at[14]

#define ALIGN_BOX &at[19]
#define ALIGN_BOX_row_from &at[20]
#define ALIGN_BOX_row_to &at[21]
#define ALIGN_BOX_column_from &at[22]
#define ALIGN_BOX_column_to &at[23]

#define ALIGN_ROWS &at[26]
#define ALIGN_ROWS_from &at[27]
#define ALIGN_ROWS_to &at[28]

#define ALIGN_COLUMNS &at[30]
#define ALIGN_COLUMNS_from &at[31]
#define ALIGN_COLUMNS_to &at[32]


/**************************************************
*
*    Defines for Module NCBI-General
*
**************************************************/

#define DATE &at[34]
#define DATE_str &at[35]
#define DATE_std &at[36]

#define PERSON_ID &at[42]
#define PERSON_ID_dbtag &at[43]
#define PERSON_ID_name &at[47]
#define PERSON_ID_ml &at[56]
#define PERSON_ID_str &at[57]

#define OBJECT_ID &at[7]
#define OBJECT_ID_id &at[8]
#define OBJECT_ID_str &at[10]

#define DBTAG &at[44]
#define DBTAG_db &at[45]
#define DBTAG_tag &at[46]

#define INT_FUZZ &at[58]
#define INT_FUZZ_p_m &at[59]
#define INT_FUZZ_range &at[60]
#define INT_FUZZ_range_max &at[61]
#define INT_FUZZ_range_min &at[62]
#define INT_FUZZ_pct &at[63]
#define INT_FUZZ_lim &at[64]
#define INT_FUZZ_alt &at[66]
#define INT_FUZZ_alt_E &at[67]

#define USER_OBJECT &at[69]
#define USER_OBJECT_class &at[70]
#define USER_OBJECT_type &at[71]
#define USER_OBJECT_data &at[72]
#define USER_OBJECT_data_E &at[73]

#define DATE_STD &at[37]
#define DATE_STD_year &at[38]
#define DATE_STD_month &at[39]
#define DATE_STD_day &at[40]
#define DATE_STD_season &at[41]

#define NAME_STD &at[48]
#define NAME_STD_last &at[49]
#define NAME_STD_first &at[50]
#define NAME_STD_middle &at[51]
#define NAME_STD_full &at[52]
#define NAME_STD_initials &at[53]
#define NAME_STD_suffix &at[54]
#define NAME_STD_title &at[55]

#define USER_FIELD &at[74]
#define USER_FIELD_label &at[75]
#define USER_FIELD_num &at[76]
#define USER_FIELD_data &at[77]
#define USER_FIELD_data_str &at[78]
#define USER_FIELD_data_int &at[79]
#define USER_FIELD_data_real &at[80]
#define USER_FIELD_data_bool &at[82]
#define USER_FIELD_data_os &at[84]
#define USER_FIELD_data_object &at[86]
#define USER_FIELD_data_strs &at[87]
#define USER_FIELD_data_strs_E &at[88]
#define USER_FIELD_data_ints &at[89]
#define USER_FIELD_data_ints_E &at[90]
#define USER_FIELD_data_reals &at[91]
#define USER_FIELD_data_reals_E &at[92]
#define USER_FIELD_data_oss &at[93]
#define USER_FIELD_data_oss_E &at[94]
#define USER_FIELD_data_fields &at[95]
#define USER_FIELD_data_fields_E &at[96]
#define USER_FIELD_data_objects &at[97]
#define USER_FIELD_data_objects_E &at[98]