/usr/share/pdb2pqr/src/aconf.py is in pdb2pqr 1.7-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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Autoconf'ed variables for PDB2PQR
This is an module for storing all autoconf'ed variables.
----------------------------
PDB2PQR -- An automated pipeline for the setup, execution, and analysis of
Poisson-Boltzmann electrostatics calculations
Copyright (c) 2002-2010, Jens Erik Nielsen, University College Dublin;
Nathan A. Baker, Washington University in St. Louis; Paul Czodrowski &
Gerhard Klebe, University of Marburg
All rights reserved.
Redistribution and use in source and binary forms, with or without modification,
are permitted provided that the following conditions are met:
* Redistributions of source code must retain the above copyright notice,
this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
* Neither the names of University College Dublin, Washington University in
St. Louis, or University of Marburg nor the names of its contributors may
be used to endorse or promote products derived from this software without
specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.
IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT,
INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING,
BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED
OF THE POSSIBILITY OF SUCH DAMAGE.
----------------------------
"""
__date__ = "8 July 2008"
__author__ = "Yong Huang"
""" The maximum number atoms to be handled on the server"""
MAXATOMS = "10000"
""" The package path for NumPy or Numeric"""
PACKAGE_PATH = "/usr/numpy/lib/python2.7/site-packages"
""" The absolute path to root HTML directory"""
SRCPATH = "/build/buildd/pdb2pqr-1.7/"
""" The path to the web site *directory* """
WEBSITE = "http://allspice/pdb2pqr/"
""" The stylesheet to use """
STYLESHEET = "http://allspice/pdb2pqr/" + "pdb2pqr.css"
""" The OPAL service URL """
PDB2PQR_OPAL_URL = ""
""" The HAVE_PDB2PQR_OPAL flag """
HAVE_PDB2PQR_OPAL = "0"
""" The HAVE_APBS flag """
HAVE_APBS = ""
""" The APBS_OPAL_URL flag """
APBS_OPAL_URL = ""
""" The DEFAULT_APBS_OPAL_URL flag """
DEFAULT_APBS_OPAL_URL = "0"
""" The installation directory """
INSTALLDIR = "/usr/"
""" The temporary directory """
TMPDIR = "tmp/"
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