/usr/share/pyshared/PyMca/FitPeakSelect.py is in pymca 4.5.0-4.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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# Copyright (C) 2004-2010 European Synchrotron Radiation Facility
#
# This file is part of the PyMCA X-ray Fluorescence Toolkit developed at
# the ESRF by the Beamline Instrumentation Software Support (BLISS) group.
#
# This toolkit is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the Free
# Software Foundation; either version 2 of the License, or (at your option)
# any later version.
#
# PyMCA is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# PyMCA; if not, write to the Free Software Foundation, Inc., 59 Temple Place,
# Suite 330, Boston, MA 02111-1307, USA.
#
# PyMCA follows the dual licensing model of Trolltech's Qt and Riverbank's PyQt
# and cannot be used as a free plugin for a non-free program.
#
# Please contact the ESRF industrial unit (industry@esrf.fr) if this license
# is a problem for you.
#############################################################################*/
from EnergyTable import qt
from QPeriodicTable import QPeriodicTable
#from QPeriodicTable import ElementList
import EnergyTable
import Elements
import copy
DEBUG = 0
QTVERSION = qt.qVersion()
ElementList = Elements.ElementList
__revision__ = "$Revision: 1.12 $"
class PeakButton(qt.QPushButton):
def __init__(self, parent, peak):
qt.QPushButton.__init__(self, parent)
#, peak)
self.peak= peak
font= self.font()
font.setBold(1)
self.setText(peak)
self.setFlat(1)
if qt.qVersion() < '4.0.0':
self.setToggleButton(0)
self.setSizePolicy(qt.QSizePolicy(qt.QSizePolicy.Expanding, qt.QSizePolicy.Expanding))
self.selected= 0
self.brush= qt.QBrush(qt.QColor(qt.Qt.yellow))
self.connect(self, qt.SIGNAL("clicked()"), self.clickedSlot)
def toggle(self):
self.selected= not self.selected
self.update()
def setSelected(self, b):
self.selected= b
if QTVERSION > '4.0.0':
if b:
role = self.backgroundRole()
palette = self.palette()
palette.setBrush( role,self.brush)
self.setPalette(palette)
else:
role = self.backgroundRole()
palette = self.palette()
palette.setBrush( role, qt.QBrush())
self.setPalette(palette)
self.update()
def isSelected(self):
return self.selected
def clickedSlot(self):
self.toggle()
if qt.qVersion() < '4.0.0':
self.emit(qt.PYSIGNAL("peakClicked"), (self.peak,))
else:
self.emit(qt.SIGNAL("peakClicked(QString)"), self.peak)
def paintEvent(self, pEvent):
if qt.qVersion() < '4.0.0':
qt.QPushButton.paintEvent(self, pEvent)
else:
p = qt.QPainter(self)
wr= self.rect()
pr= qt.QRect(wr.left()+1, wr.top()+1, wr.width()-2, wr.height()-2)
if self.selected:
p.fillRect(pr, self.brush)
p.setPen(qt.Qt.black)
p.drawRoundRect(pr)
p.end()
qt.QPushButton.paintEvent(self, pEvent)
def drawButton(self, p):
wr= self.rect()
pr= qt.QRect(wr.left()+1, wr.top()+1, wr.width()-2, wr.height()-2)
if self.selected:
p.fillRect(pr, self.brush)
qt.QPushButton.drawButtonLabel(self, p)
p.setPen(qt.Qt.black)
if qt.qVersion() < '3.0.0':
p.drawRoundRect(pr,25,25)
else:
p.drawRoundRect(pr)
class PeakButtonList(qt.QWidget):
def __init__(self, parent=None, name="PeakButtonList",
peaklist=['K','Ka','Kb','L','L1','L2','L3','M'],
fl=0):
qt.QWidget.__init__(self,parent)
self.peaklist = peaklist
if qt.qVersion() < '4.0.0':
layout= qt.QHBoxLayout(self, 0, 5)
else:
layout= qt.QHBoxLayout(self)
layout.setMargin(0)
layout.setSpacing(5)
#, 0, 5)
layout.addStretch(2)
self.buttondict={}
for key in peaklist:
self.buttondict[key] = PeakButton(self, key)
layout.addWidget(self.buttondict[key])
if qt.qVersion() < '4.0.0':
self.connect(self.buttondict[key],
qt.PYSIGNAL("peakClicked"), self.__selection)
else:
self.connect(self.buttondict[key],
qt.SIGNAL("peakClicked(QString)"), self.__selection)
layout.addStretch(1)
#Reset
self.resetBut = qt.QPushButton(self)
self.resetBut.setText("Reset")
layout.addWidget(self.resetBut)
self.connect(self.resetBut,qt.SIGNAL('clicked()'),self.__resetBut)
layout.addStretch(2)
def __resetBut(self):
for key in self.peaklist:
self.buttondict[key].setSelected(0)
if qt.qVersion() < '4.0.0':
self.emit(qt.PYSIGNAL('selectionChanged'),([],))
else:
self.emit(qt.SIGNAL('selectionChanged'),([]))
def __selection(self, peak):
selection= []
for key in self.peaklist:
if self.buttondict[key].isSelected():
selection.append(key)
if qt.qVersion() < '4.0.0':
self.emit(qt.PYSIGNAL("selectionChanged"), (selection,))
else:
self.emit(qt.SIGNAL("selectionChanged"), (selection))
def setSelection(self, selection=[]):
for key in self.peaklist:
if key in selection:
self.buttondict[key].setSelected(1)
else: self.buttondict[key].setSelected(0)
def setDisabled(self,selection=[]):
for key in self.peaklist:
if key in selection:
self.buttondict[key].setEnabled(0)
else: self.buttondict[key].setEnabled(1)
class FitPeakSelect(qt.QWidget):
def __init__(self, parent=None, name="FitPeakSelect",peakdict = {}, fl=0, energyTable = None):
qt.QWidget.__init__(self,parent)
if QTVERSION < '4.0.0':
self.setSizePolicy(qt.QSizePolicy(qt.QSizePolicy.Minimum,
qt.QSizePolicy.Minimum))
layout=qt.QVBoxLayout(self)
layout.setMargin(0)
layout.setSpacing(10)
hbox = qt.QWidget(self)
hboxLayout = qt.QHBoxLayout(hbox)
hboxLayout.setMargin(0)
hboxLayout.setSpacing(20)
hboxLayout.addWidget(HorizontalSpacer(hbox))
l1=MyQLabel(hbox, bold=True, color=qt.QColor(0,0,0))
hboxLayout.addWidget(l1)
self.energyValue = None
if energyTable is not None:
text = '<b><nobr>Excitation Energy (keV)</nobr></b>'
l1.setFixedWidth(l1.fontMetrics().width("##"+text+"####"))
l1.setText(text)
self.energyTable = energyTable
add = 0
self.energy = MyQLabel(hbox)
hboxLayout.addWidget(self.energy)
self.energy.setFixedWidth(self.energy.fontMetrics().width('########.###'))
self.energy.setAlignment(qt.Qt.AlignLeft)
#self.energy.setForegroundColor(qt.Qt.red)
else:
l1.setText('<b><nobr>Excitation Energy (keV)</nobr></b>')
self.energyTable = EnergyTable.EnergyTable(self)
add = 1
self.energy = qt.QLineEdit(hbox)
hboxLayout.addWidget(self.energy)
self.energy.setFixedWidth(self.energy.fontMetrics().width('########.###'))
self.energyButton = qt.QPushButton(hbox)
hboxLayout.addWidget(self.energyButton)
self.energyButton.setText("Update")
self.connect(self.energyButton, qt.SIGNAL('clicked()'),
self._energyClicked)
hboxLayout.addWidget(HorizontalSpacer(hbox))
layout.addSpacing(20)
layout.addWidget(hbox)
self.table = QPeriodicTable(self)
line= qt.QFrame(self)
line.setFrameShape(qt.QFrame.HLine)
line.setFrameShadow(qt.QFrame.Sunken)
self.peaks = PeakButtonList(self)
self.peaks.setDisabled(['K','Ka','Kb','L','L1','L2','L3','M'])
if qt.qVersion() < '4.0.0':
self.connect(self.energyTable, qt.PYSIGNAL("EnergyTableSignal"),
self._energyTableAction)
self.connect(self.table, qt.PYSIGNAL("elementClicked"),
self.elementClicked)
self.connect(self.peaks, qt.PYSIGNAL("selectionChanged"),
self.peakSelectionChanged)
else:
self.connect(self.energyTable, qt.SIGNAL("EnergyTableSignal"),
self._energyTableAction)
self.connect(self.table, qt.SIGNAL("elementClicked"),
self.elementClicked)
self.connect(self.peaks, qt.SIGNAL("selectionChanged"),
self.peakSelectionChanged)
#Reset All
self.resetAllButton = qt.QPushButton(self.peaks)
palette = qt.QPalette(self.resetAllButton.palette())
role = self.resetAllButton.foregroundRole()
palette.setColor(role, qt.Qt.red)
self.resetAllButton.setPalette(palette)
self.resetAllButton.setText("Reset All")
self.peaks.layout().addWidget(self.resetAllButton)
self.connect(self.resetAllButton, qt.SIGNAL("clicked()"),
self.__resetAll)
layout.addWidget(self.table)
layout.addWidget(line)
layout.addWidget(self.peaks)
if add:layout.addWidget(self.energyTable)
layout.addStretch(1)
self.current= None
self.setSelection(peakdict)
def __resetAll(self):
msg=qt.QMessageBox.warning( self, "Clear selection",
"Do you want to reset the selection for all elements?",
qt.QMessageBox.Yes,qt.QMessageBox.No)
if msg == qt.QMessageBox.No:
return
self.peakdict = {}
self.table.setSelection(list(self.peakdict.keys()))
self.peaks.setSelection([])
self.peakSelectionChanged([])
def __getZ(self,element):
return ElementList.index(element) + 1
def setSelection(self,peakdict):
self.peakdict = {}
self.peakdict.update(peakdict)
for key in list(self.peakdict.keys()):
if type(self.peakdict[key])!= type([]):
self.peakdict[key]= [ self.peakdict[key] ]
self.table.setSelection(list(self.peakdict.keys()))
def getSelection(self):
ddict={}
for key in list(self.peakdict.keys()):
if len(self.peakdict[key]):
ddict[key]= self.peakdict[key]
return ddict
def peakSelectionChanged(self,selection):
if self.current is None: return
if type(selection) != type([]):
selection=selection.list
self.peakdict[self.current] = selection
if len(self.peakdict[self.current]):
self.table.setElementSelected(self.current,1)
else:
self.table.setElementSelected(self.current,0)
sel= self.getSelection()
sel['current'] = self.current
if qt.qVersion() < '4.0.0':
self.emit(qt.PYSIGNAL("FitPeakSelect"), (sel,))
else:
self.emit(qt.SIGNAL("FitPeakSelect"), (sel))
def elementClicked(self,symbol):
if qt.qVersion() > '4.0.0':symbol = str(symbol)
if not (symbol in self.peakdict):
self.peakdict[symbol] = []
self.current = symbol
if len(self.peakdict[self.current]):
self.table.setElementSelected(self.current,1)
else:
self.table.setElementSelected(self.current,0)
for ele in list(self.peakdict.keys()):
if ele != symbol:
if not len(self.peakdict[ele]):
del self.peakdict[ele]
sel= self.getSelection()
sel['current'] = self.current
self.setPeaksDisabled(symbol)
if qt.qVersion() < '4.0.0':
self.emit(qt.PYSIGNAL("FitPeakSelect"), (sel,))
else:
self.emit(qt.SIGNAL("FitPeakSelect"),(sel))
self.peaks.setSelection(self.peakdict[symbol])
def setPeaksDisabled(self,symbol):
z = self.__getZ(symbol)
if (z > 47) and (Elements.getomegam5('Cd') > 0.0):
#we have data available to support that
disabled = []
elif z > 66:
#self.peaks.setDisabled(['Ka','Kb'])
#disabled = ['Ka','Kb']
disabled = []
elif z > 17:
#self.peaks.setDisabled(['Ka','Kb','M'])
#disabled = ['Ka','Kb','M']
disabled = ['M']
elif z > 2:
#self.peaks.setDisabled(['Ka','Kb','L','L1','L2','L3','M'])
#disabled = ['Ka','Kb','L','L1','L2','L3','M']
disabled = ['L','L1','L2','L3','M']
else:
#self.peaks.setDisabled(['K','Ka','Kb','L','L1','L2','L3','M'])
#disabled = ['Ka','Kb','L','L1','L2','L3','M']
disabled = ['Ka', 'Kb','L','L1','L2','L3','M']
ele = symbol
if self.energyValue is not None:
for peak in ['K', 'Ka', 'Kb', 'L','L1','L2','L3','M']:
if peak not in disabled:
if peak == 'L':
if Elements.Element[ele]['binding']['L3'] > self.energyValue:
disabled.append(peak)
elif peak == 'M':
if Elements.Element[ele]['binding']['M5'] > self.energyValue:
disabled.append(peak)
elif peak == 'Ka':
if Elements.Element[ele]['binding']['K'] > self.energyValue:
disabled.append(peak)
elif peak == 'Kb':
if Elements.Element[ele]['binding']['K'] > self.energyValue:
disabled.append(peak)
elif Elements.Element[ele]['binding'][peak] > self.energyValue:
disabled.append(peak)
else:
pass
self.peaks.setDisabled(disabled)
def setEnergy(self, energy):
if (energy is None) or (energy == []):
self.energyValue = energy
self.energy.setText("None")
elif energy == "None":
self.energyValue = None
self.energy.setText("None")
elif type(energy) == type([]):
self.energyValue = max(energy)
else:
self.energyValue = energy
self.energy.setText("%.4f" % energy)
self._energyClicked()
def _energyTableAction(self, ddict):
if DEBUG:
print("_energyTableAction called",)
print("ddict = ",ddict.dict)
elist, wlist, flist, slist= self.energyTable.getParameters()
maxenergy = 0.0
for i in range(len(flist)):
if flist[i]:
if elist[i] is not None:
if wlist[i] > 0.0:
if elist[i] > maxenergy:
maxenergy = elist[i]
if maxenergy == 0.0:maxenergy = None
self.setEnergy(maxenergy)
def _energyClicked(self):
string = str(self.energy.text())
string.replace(" ","")
if (string != "None") and len(string):
try:
value = float(string)
self.energyValue = value
if False:
self.energyButton.setFocus()
except:
msg=qt.QMessageBox(self.energy)
msg.setIcon(qt.QMessageBox.Critical)
msg.setText("Invalid Float")
msg.exec_loop()
self.energy.setFocus()
else:
self.energyValue = None
if False:
self.energyButton.setFocus()
self.__updateSelection()
def __updateSelection(self):
if self.energyValue is not None:
changed = 0
for ele in list(self.peakdict.keys()):
for peak in self.peakdict[ele]:
if peak in self.peakdict[ele]:
index = self.peakdict[ele].index(peak)
if peak == 'L':
if Elements.Element[ele]['binding']['L3'] > self.energyValue:
del self.peakdict[ele][index]
elif peak == 'M':
if Elements.Element[ele]['binding']['M5'] > self.energyValue:
del self.peakdict[ele][index]
elif peak == "Ka":
if Elements.Element[ele]['binding']['K'] > self.energyValue:
del self.peakdict[ele][index]
elif peak == "Kb":
if Elements.Element[ele]['binding']['K'] > self.energyValue:
del self.peakdict[ele][index]
elif Elements.Element[ele]['binding'][peak] > self.energyValue:
del self.peakdict[ele][index]
else:
pass
if ele == self.current:
self.peaks.setSelection(self.peakdict[ele])
self.peakSelectionChanged(self.peakdict[ele])
self.elementClicked(ele)
if not len(self.peakdict[ele]): del self.peakdict[ele]
dict = copy.deepcopy(self.peakdict)
self.setSelection(dict)
class HorizontalSpacer(qt.QWidget):
def __init__(self, *args):
qt.QWidget.__init__(self, *args)
self.setSizePolicy(qt.QSizePolicy(qt.QSizePolicy.Expanding, qt.QSizePolicy.Fixed))
class MyQLineEdit(qt.QLineEdit):
def __init__(self,parent=None,name=None):
qt.QLineEdit.__init__(self,parent,name)
def focusInEvent(self,event):
self.setPaletteBackgroundColor(qt.QColor('yellow'))
def focusOutEvent(self,event):
self.setPaletteBackgroundColor(qt.QColor('white'))
def setPaletteBackgroundColor(self, qcolor):
if qt.qVersion() < '3.0.0':
palette = self.palette()
palette.setColor(qt.QColorGroup.Base,qcolor)
self.setPalette(palette)
text = self.text()
self.setText(text)
else:
qt.QLineEdit.setPaletteBackgroundColor(self,qcolor)
class MyQLabel(qt.QLabel):
def __init__(self,parent=None,name=None,fl=0,bold=True, color= qt.Qt.red):
qt.QLabel.__init__(self,parent)
if qt.qVersion() <'4.0.0':
self.color = color
self.bold = bold
else:
palette = self.palette()
role = self.foregroundRole()
palette.setColor(role,color)
self.setPalette(palette)
self.font().setBold(bold)
if qt.qVersion() < '4.0.0':
def drawContents(self, painter):
painter.font().setBold(self.bold)
pal =self.palette()
pal.setColor(qt.QColorGroup.Foreground,self.color)
self.setPalette(pal)
qt.QLabel.drawContents(self,painter)
painter.font().setBold(0)
def testwidget():
import sys
def change(ddict):
print("New selection:",)
print(ddict)
a = qt.QApplication(sys.argv)
qt.QObject.connect(a,qt.SIGNAL("lastWindowClosed()"),a,qt.SLOT("quit()"))
w = qt.QTabWidget()
if qt.qVersion() < '4.0.0':
f = FitPeakSelect(w)
w.addTab(f, "QPeriodicTable")
qt.QObject.connect(f, qt.PYSIGNAL("FitPeakSelect"), change)
w.show()
a.exec_loop()
else:
f = FitPeakSelect()
w.addTab(f, "QPeriodicTable")
qt.QObject.connect(f, qt.SIGNAL("FitPeakSelect"), change)
w.show()
a.exec_()
if __name__ == "__main__":
testwidget()
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