qiime 1.3.0-3 in ubuntu - precise / universe

About

This package is 465.9 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/q/qiime/qiime_1.3.0-3_amd64.deb .

View its full control file here: debian/control.

Description

Quantitative Insights Into Microbial Ecology

Relations

Package Contents

File	Mime Type	Owner	Mode	Size
postinst	text/x-shellscript	N/A	N/A	177 bytes
prerm	text/x-shellscript	N/A	N/A	247 bytes
/etc/		root:root	0o755
/etc/qiime/		root:root	0o755
/etc/qiime/qiime_config	text/plain	root:root	0o644	498 bytes
/usr/		root:root	0o755
/usr/bin/		root:root	0o755
/usr/bin/denoiser		root:root	0o777
/usr/bin/qiime	text/x-shellscript	root:root	0o755	1.2 KB
/usr/lib/		root:root	0o755
/usr/lib/qiime/		root:root	0o755
/usr/lib/qiime/bin/		root:root	0o755
/usr/lib/qiime/bin/add_taxa.py	text/x-python	root:root	0o755	2.1 KB
/usr/lib/qiime/bin/adjust_seq_orientation.py	text/x-python	root:root	0o755	2.3 KB
/usr/lib/qiime/bin/align_seqs.py	text/x-python	root:root	0o755	10.7 KB
/usr/lib/qiime/bin/alpha_diversity.py	text/x-python	root:root	0o755	5.6 KB
/usr/lib/qiime/bin/alpha_rarefaction.py	text/x-python	root:root	0o755	5.4 KB
/usr/lib/qiime/bin/ampliconnoise.py	text/x-python	root:root	0o755	6.2 KB
/usr/lib/qiime/bin/assign_taxonomy.py	text/x-python	root:root	0o755	10.8 KB
/usr/lib/qiime/bin/beta_diversity.py	text/x-python	root:root	0o755	7.1 KB
/usr/lib/qiime/bin/beta_diversity_through_3d_plots.py	text/x-python	root:root	0o755	1.0 KB
/usr/lib/qiime/bin/beta_diversity_through_plots.py	text/x-python	root:root	0o755	6.9 KB
/usr/lib/qiime/bin/beta_significance.py	text/x-python	root:root	0o755	6.0 KB
/usr/lib/qiime/bin/blast_wrapper.py	text/x-python	root:root	0o755	2.4 KB
/usr/lib/qiime/bin/categorized_dist_scatterplot.py	text/x-python	root:root	0o755	5.7 KB
/usr/lib/qiime/bin/check_id_map.py	text/x-python	root:root	0o755	6.6 KB
/usr/lib/qiime/bin/cluster_quality.py	text/x-python	root:root	0o755	3.2 KB
/usr/lib/qiime/bin/collate_alpha.py	text/x-python	root:root	0o755	5.7 KB
/usr/lib/qiime/bin/compare_3d_plots.py	text/x-python	root:root	0o755	9.2 KB
/usr/lib/qiime/bin/compare_alpha_diversity.py	text/x-python	root:root	0o755	3.1 KB
/usr/lib/qiime/bin/compare_distance_matrices.py	text/x-python	root:root	0o755	3.3 KB
/usr/lib/qiime/bin/consensus_tree.py	text/x-python	root:root	0o755	3.5 KB
/usr/lib/qiime/bin/convert_otu_table_to_unifrac_sample_mapping.py	text/x-python	root:root	0o755	1.9 KB
/usr/lib/qiime/bin/convert_unifrac_sample_mapping_to_otu_table.py	text/x-python	root:root	0o755	1.8 KB
/usr/lib/qiime/bin/core_qiime_analyses.py	text/x-python	root:root	0o755	8.4 KB
/usr/lib/qiime/bin/count_seqs.py	text/x-python	root:root	0o755	2.8 KB
/usr/lib/qiime/bin/denoise.py	text/x-python	root:root	0o755	1.1 KB
/usr/lib/qiime/bin/denoiser_postprocess.py	text/x-python	root:root	0o755	3.9 KB
/usr/lib/qiime/bin/denoiser_preprocess.py	text/x-python	root:root	0o755	5.2 KB
/usr/lib/qiime/bin/denoiser.py	text/x-python	root:root	0o755	11.2 KB
/usr/lib/qiime/bin/denoiser_worker.py	text/x-python	root:root	0o755	3.0 KB
/usr/lib/qiime/bin/denoise_wrapper.py	text/x-python	root:root	0o755	6.0 KB
/usr/lib/qiime/bin/dissimilarity_mtx_stats.py	text/x-python	root:root	0o755	2.7 KB
/usr/lib/qiime/bin/exclude_seqs_by_blast.py	text/x-python	root:root	0o755	11.8 KB
/usr/lib/qiime/bin/extract_seqs_by_sample_id.py	text/x-python	root:root	0o755	3.0 KB
/usr/lib/qiime/bin/filter_alignment.py	text/x-python	root:root	0o755	6.7 KB
/usr/lib/qiime/bin/filter_by_metadata.py	text/x-python	root:root	0o755	5.0 KB
/usr/lib/qiime/bin/filter_fasta.py	text/x-python	root:root	0o755	4.5 KB
/usr/lib/qiime/bin/filter_otus_by_sample.py	text/x-python	root:root	0o755	3.4 KB
/usr/lib/qiime/bin/filter_otu_table.py	text/x-python	root:root	0o755	6.3 KB
/usr/lib/qiime/bin/filter_tree.py	text/x-python	root:root	0o755	3.3 KB
/usr/lib/qiime/bin/fix_arb_fasta.py	text/x-python	root:root	0o755	1.5 KB
/usr/lib/qiime/bin/identify_chimeric_seqs.py	text/x-python	root:root	0o755	9.9 KB
/usr/lib/qiime/bin/identify_missing_files.py	text/x-python	root:root	0o755	1.7 KB
/usr/lib/qiime/bin/inflate_denoiser_output.py	text/x-python	root:root	0o755	3.3 KB
/usr/lib/qiime/bin/jackknifed_beta_diversity.py	text/x-python	root:root	0o755	6.7 KB
/usr/lib/qiime/bin/make_2d_plots.py	text/x-python	root:root	0o755	9.7 KB
/usr/lib/qiime/bin/make_3d_plots.py	text/x-python	root:root	0o755	20.0 KB
/usr/lib/qiime/bin/make_bootstrapped_tree.py	text/x-python	root:root	0o755	2.1 KB
/usr/lib/qiime/bin/make_distance_histograms.py	text/x-python	root:root	0o755	11.9 KB
/usr/lib/qiime/bin/make_fastq.py	text/x-python	root:root	0o755	2.8 KB
/usr/lib/qiime/bin/make_library_id_lists.py	text/x-python	root:root	0o755	3.7 KB
/usr/lib/qiime/bin/make_otu_heatmap_html.py	text/x-python	root:root	0o755	9.1 KB
/usr/lib/qiime/bin/make_otu_heatmap.py	text/x-python	root:root	0o755	8.1 KB
/usr/lib/qiime/bin/make_otu_network.py	text/x-python	root:root	0o755	7.7 KB
/usr/lib/qiime/bin/make_otu_table.py	text/x-python	root:root	0o755	3.0 KB
/usr/lib/qiime/bin/make_per_library_sff.py	text/x-python	root:root	0o755	2.5 KB
/usr/lib/qiime/bin/make_phylogeny.py	text/x-python	root:root	0o755	4.9 KB
/usr/lib/qiime/bin/make_pie_charts.py	text/x-python	root:root	0o755	1.2 KB
/usr/lib/qiime/bin/make_prefs_file.py	text/x-python	root:root	0o755	6.1 KB
/usr/lib/qiime/bin/make_qiime_py_file.py	text/x-python	root:root	0o755	5.4 KB
/usr/lib/qiime/bin/make_qiime_rst_file.py	text/x-python	root:root	0o755	9.2 KB
/usr/lib/qiime/bin/make_rarefaction_plots.py	text/x-python	root:root	0o755	8.8 KB
/usr/lib/qiime/bin/make_tep.py	text/x-python	root:root	0o755	5.2 KB
/usr/lib/qiime/bin/merge_denoiser_output.py	text/x-python	root:root	0o755	4.4 KB
/usr/lib/qiime/bin/merge_mapping_files.py	text/x-python	root:root	0o755	2.2 KB
/usr/lib/qiime/bin/merge_otu_maps.py	text/x-python	root:root	0o755	3.5 KB
/usr/lib/qiime/bin/merge_otu_tables.py	text/x-python	root:root	0o755	2.5 KB
/usr/lib/qiime/bin/multiple_rarefactions_even_depth.py	text/x-python	root:root	0o755	3.3 KB
/usr/lib/qiime/bin/multiple_rarefactions.py	text/x-python	root:root	0o755	5.4 KB
/usr/lib/qiime/bin/neighbor_joining.py	text/x-python	root:root	0o755	2.5 KB
/usr/lib/qiime/bin/nmds.py	text/x-python	root:root	0o755	3.1 KB
/usr/lib/qiime/bin/otu_category_significance.py	text/x-python	root:root	0o755	18.8 KB
/usr/lib/qiime/bin/parallel_align_seqs_pynast.py	text/x-python	root:root	0o755	10.3 KB
/usr/lib/qiime/bin/parallel_alpha_diversity.py	text/x-python	root:root	0o755	8.2 KB
/usr/lib/qiime/bin/parallel_assign_taxonomy_blast.py	text/x-python	root:root	0o755	10.0 KB
/usr/lib/qiime/bin/parallel_assign_taxonomy_rdp.py	text/x-python	root:root	0o755	9.5 KB
/usr/lib/qiime/bin/parallel_beta_diversity.py	text/x-python	root:root	0o755	10.1 KB
/usr/lib/qiime/bin/parallel_blast.py	text/x-python	root:root	0o755	9.6 KB
/usr/lib/qiime/bin/parallel_identify_chimeric_seqs.py	text/x-python	root:root	0o755	17.1 KB
/usr/lib/qiime/bin/parallel_multiple_rarefactions.py	text/x-python	root:root	0o755	8.9 KB
/usr/lib/qiime/bin/parallel_pick_otus_blast.py	text/x-python	root:root	0o755	10.2 KB
/usr/lib/qiime/bin/parallel_pick_otus_uclust_ref.py	text/x-python	root:root	0o755	11.6 KB
/usr/lib/qiime/bin/per_library_stats.py	text/x-python	root:root	0o755	4.6 KB
/usr/lib/qiime/bin/pick_otus.py	text/x-python	root:root	0o755	23.9 KB
/usr/lib/qiime/bin/pick_otus_through_otu_table.py	text/x-python	root:root	0o755	5.8 KB
/usr/lib/qiime/bin/pick_reference_otus_through_otu_table.py	text/x-python	root:root	0o755	5.2 KB
/usr/lib/qiime/bin/pick_rep_set.py	text/x-python	root:root	0o755	6.1 KB
/usr/lib/qiime/bin/plot_rank_abundance_graph.py	text/x-python	root:root	0o755	3.9 KB
/usr/lib/qiime/bin/plot_semivariogram.py	text/x-python	root:root	0o755	4.8 KB
/usr/lib/qiime/bin/plot_taxa_summary.py	text/x-python	root:root	0o755	13.7 KB
/usr/lib/qiime/bin/poller_example.py	text/x-python	root:root	0o755	5.5 KB
/usr/lib/qiime/bin/poller.py	text/x-python	root:root	0o755	2.7 KB
/usr/lib/qiime/bin/pool_by_metadata.py	text/x-python	root:root	0o755	4.1 KB
/usr/lib/qiime/bin/principal_coordinates.py	text/x-python	root:root	0o755	3.1 KB
/usr/lib/qiime/bin/print_qiime_config.py	text/x-python	root:root	0o755	27.0 KB
/usr/lib/qiime/bin/process_iseq.py	text/x-python	root:root	0o755	4.9 KB
/usr/lib/qiime/bin/process_qseq.py	text/x-python	root:root	0o755	3.0 KB
/usr/lib/qiime/bin/process_sff.py	text/x-python	root:root	0o755	2.9 KB
/usr/lib/qiime/bin/quality_scores_plot.py	text/x-python	root:root	0o755	3.2 KB
/usr/lib/qiime/bin/shared_phylotypes.py	text/x-python	root:root	0o755	4.0 KB
/usr/lib/qiime/bin/simsam.py	text/x-python	root:root	0o755	2.1 KB
/usr/lib/qiime/bin/single_rarefaction.py	text/x-python	root:root	0o755	3.8 KB
/usr/lib/qiime/bin/sort_denoiser_output.py	text/x-python	root:root	0o755	2.2 KB
/usr/lib/qiime/bin/sort_otu_table.py	text/x-python	root:root	0o755	3.7 KB
/usr/lib/qiime/bin/split_libraries_fastq.py	text/x-python	root:root	0o755	8.8 KB
/usr/lib/qiime/bin/split_libraries_illumina.py	text/x-python	root:root	0o755	8.3 KB
/usr/lib/qiime/bin/split_libraries.py	text/x-python	root:root	0o755	20.4 KB
/usr/lib/qiime/bin/split_otu_table_by_taxonomy.py	text/x-python	root:root	0o755	2.4 KB
/usr/lib/qiime/bin/split_otu_table.py	text/x-python	root:root	0o755	2.8 KB
/usr/lib/qiime/bin/start_parallel_jobs.py	text/x-python	root:root	0o755	4.5 KB
/usr/lib/qiime/bin/start_parallel_jobs_torque.py	text/x-python	root:root	0o755	3.2 KB
/usr/lib/qiime/bin/submit_to_mgrast.py	text/x-python	root:root	0o755	2.8 KB
/usr/lib/qiime/bin/summarize_otu_by_cat.py	text/x-python	root:root	0o755	3.0 KB
/usr/lib/qiime/bin/summarize_taxa.py	text/x-python	root:root	0o755	9.4 KB
/usr/lib/qiime/bin/summarize_taxa_through_plots.py	text/x-python	root:root	0o755	4.8 KB
/usr/lib/qiime/bin/supervised_learning.py	text/x-python	root:root	0o755	9.1 KB
/usr/lib/qiime/bin/transform_coordinate_matrices.py	text/x-python	root:root	0o755	5.6 KB
/usr/lib/qiime/bin/tree_compare.py	text/x-python	root:root	0o755	3.2 KB
/usr/lib/qiime/bin/trflp_file_to_otu_table.py	text/x-python	root:root	0o755	2.1 KB
/usr/lib/qiime/bin/trim_sff_primers.py	text/x-python	root:root	0o755	2.5 KB
/usr/lib/qiime/bin/truncate_fasta_qual_files.py	text/x-python	root:root	0o755	2.7 KB
/usr/lib/qiime/bin/uclust	text/x-shellscript	root:root	0o755	979 bytes
/usr/lib/qiime/bin/unweight_fasta.py	text/x-python	root:root	0o755	2.0 KB
/usr/lib/qiime/bin/upgma_cluster.py	text/x-python	root:root	0o755	2.6 KB
/usr/lib/qiime/shell/		root:root	0o755
/usr/lib/qiime/shell/.bashrc	text/plain	root:root	0o644	298 bytes
/usr/lib/qiime/shell/qiime_environment	text/plain	root:root	0o644	936 bytes
/usr/lib/qiime/shell/qiime_help	text/plain	root:root	0o644	1.7 KB
/usr/lib/qiime/shell/.zshrc	text/plain	root:root	0o644	256 bytes
/usr/lib/qiime/support_files/		root:root	0o755
/usr/lib/qiime/support_files/denoiser/		root:root	0o755
/usr/lib/qiime/support_files/denoiser/bin/		root:root	0o755
/usr/lib/qiime/support_files/denoiser/bin/FlowgramAli_4frame	application/x-executable	root:root	0o755	1.1 MB
/usr/share/		root:root	0o755
/usr/share/doc/		root:root	0o755
/usr/share/doc/qiime/		root:root	0o755
/usr/share/doc/qiime/changelog.Debian.gz	application/gzip	root:root	0o644	1.5 KB
/usr/share/doc/qiime/copyright	text/plain	root:root	0o644	623 bytes
/usr/share/doc/qiime/qiime_parameters.txt	text/plain	root:root	0o644	3.2 KB
/usr/share/doc/qiime/README	text/plain	root:root	0o644	2.9 KB
/usr/share/doc/qiime/README.Debian	text/plain	root:root	0o644	2.2 KB
/usr/share/python/		root:root	0o755
/usr/share/python/runtime.d/		root:root	0o755
/usr/share/python/runtime.d/qiime.rtupdate	text/x-shellscript	root:root	0o755	125 bytes