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<li><a class="reference internal" href="#parameters">Parameters</a></li>
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  <div class="section" id="the-xsh-scired-slit-stare-recipe">
<h1>The xsh_scired_slit_stare recipe<a class="headerlink" href="#the-xsh-scired-slit-stare-recipe" title="Permalink to this headline"></a></h1>
<dl class="data">
<dt id="xsh_scired_slit_stare">
<tt class="descname">xsh_scired_slit_stare</tt><a class="headerlink" href="#xsh_scired_slit_stare" title="Permalink to this definition"></a></dt>
<dd></dd></dl>

<div class="section" id="synopsis">
<h2>Synopsis<a class="headerlink" href="#synopsis" title="Permalink to this headline"></a></h2>
<p>Reduce science exposure in SLIT configuration and stare mode</p>
</div>
<div class="section" id="description">
<h2>Description<a class="headerlink" href="#description" title="Permalink to this headline"></a></h2>
<p>This recipe reduces science exposure in SLIT configuration and stare mode
Input Frames :</p>
<blockquote>
<div><ul class="simple">
<li>A set of n Science frames ( n == 1 or &gt;=3, Tag = OBJECT_SLIT_STARE_UVB)</li>
<li>A spectral format table (Tag = SPECTRAL_FORMAT_TAB_arm)</li>
<li>[UVB,VIS] A master bias frame (Tag = MASTER_BIAS_arm)</li>
<li>[OPTIONAL]A master dark frame (Tag = MASTER_DARK_arm)</li>
<li>A master flat frame (Tag = MASTER_FLAT_SLIT_arm)</li>
<li>An order table frame(Tag = ORDER_TAB_EDGES_SLIT_arm)</li>
<li>[OPTIONAL] A table with dispersion coefficients (Tag = DISP_TAB_arm,
required in poly mode</li>
<li>[poly mode] A wave solution frame(Tag = WAVE_TAB_2D_arm)</li>
<li>[physical model mode] A model cfg table (Format = TABLE, Tag = XSH_MOD_CFG_TAB_arm)</li>
<li>[OPTIONAL] A table specifying multiplying factor for break points
(Tag = SKY_SUB_BKPTS_arm) to generate</li>
<li>[OPTIONAL] A non-linear badpixel map (Tag = BP_MAP_NL_arm)</li>
<li>[OPTIONAL] A reference badpixel map (Tag = BP_MAP_RP_arm)</li>
<li>[OPTIONAL,physmod mode] A table listing sky line positions (Tag = SKY_LINE_LIST_arm)
this is used to be able to control quality of sky subtraction, for example
projecting guess positions on the product SCI_SLIT_STARE_SUB_SKY_arm</li>
<li>[OPTIONAL] The instrument response table (Tag = RESPONSE_ORDER1D_SLIT_arm)</li>
<li>[OPTIONAL] An atmospheric extinction table (Tag = ATMOS_EXT_arm)</li>
<li>[OPTIONAL] A telluric mask (Tag = TELL_MASK_arm)</li>
</ul>
</div></blockquote>
<dl class="docutils">
<dt>Products :</dt>
<dd><ul class="first last simple">
<li>PREFIX_ORDER2D_arm extracted spectrum, order-by-order, 2D</li>
<li>PREFIX_ORDER1D_arm extracted spectrum, order-by-order, 1D</li>
<li>PREFIX_MERGE2D_arm merged spectrum, 2D</li>
<li>PREFIX_MERGE1D_arm merged spectrum, 1D</li>
<li>SKY_SLIT_MERGE2D_arm merged spectrum sky, 2D</li>
<li>PREFIX_SUB_BACK_SLIT_arm sci frame bias, (dark), inter-order bkg subtracted</li>
<li>PREFIX_WAVE_MAP_arm, wave map image</li>
<li>PREFIX_SLIT_MAP_arm, slit map image</li>
<li>PREFIX_DIVFF_arm as PREFIX_SUB_BACK_SLIT_arm, flat fielded</li>
<li>PREFIX_SUB_SKY_arm, as PREFIX_DIVFF_arm, sky subtracted</li>
<li>PREFIX_SKY_arm, 2D sky frame</li>
<li>PREFIX_SKY_ORD1D_arm, 1D sky image (order-by-order)</li>
<li>PREFIX_BACK_SLIT_arm, inter order background image</li>
<li>where PREFIX is SCI, FLUX, TELL if input raw DPR.TYPE contains OBJECT or FLUX or TELLURIC</li>
<li>[OPTIONAL, if response and atm ext are provided]  PREFIX_FLUX_ORDER2D_arm (2 dimension)</li>
<li>[OPTIONAL, if response and atm ext are provided]  PREFIX_FLUX_ORDER1D_arm (1 dimension)</li>
<li>[OPTIONAL, if response and atm ext are provided]  PREFIX_FLUX_MERGE2D_arm (2 dimension)</li>
<li>[OPTIONAL, if response and atm ext are provided]  PREFIX_FLUX_MERGE1D_arm (1 dimension)</li>
<li>PREFIX_ON_arm bias (dark) subtracted sci frame</li>
</ul>
</dd>
</dl>
</div>
<div class="section" id="constructor">
<h2>Constructor<a class="headerlink" href="#constructor" title="Permalink to this headline"></a></h2>
<dl class="method">
<dt>
<tt class="descclassname">cpl.</tt><tt class="descname">Recipe</tt><big>(</big><em>&quot;xsh_scired_slit_stare&quot;</em><big>)</big></dt>
<dd><p>Create an object for the recipe xsh_scired_slit_stare.</p>
</dd></dl>

<div class="highlight-python"><div class="highlight"><pre><span class="kn">import</span> <span class="nn">cpl</span>
<span class="n">xsh_scired_slit_stare</span> <span class="o">=</span> <span class="n">cpl</span><span class="o">.</span><span class="n">Recipe</span><span class="p">(</span><span class="s">&quot;xsh_scired_slit_stare&quot;</span><span class="p">)</span>
</pre></div>
</div>
</div>
<div class="section" id="parameters">
<h2>Parameters<a class="headerlink" href="#parameters" title="Permalink to this headline"></a></h2>
<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.keep_temp">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">keep_temp</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.keep_temp" title="Permalink to this definition"></a></dt>
<dd><p>If &#8216;no&#8217;, temporary files are deleted. (str; default: &#8216;no&#8217;) [default=&#8221;no&#8221;].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.debug_level">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">debug_level</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.debug_level" title="Permalink to this definition"></a></dt>
<dd><p>Additional xshooter debug level. One of &#8216;none&#8217;, &#8216;low&#8217;, &#8216;medium&#8217;,  &#8216;high&#8217; (str; default: &#8216;none&#8217;) [default=&#8221;none&#8221;].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.time_stamp">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">time_stamp</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.time_stamp" title="Permalink to this definition"></a></dt>
<dd><p>Add timestamp to product file name. (bool; default: False) [default=False].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.decode_bp">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">decode_bp</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.decode_bp" title="Permalink to this definition"></a></dt>
<dd><p>Integer representation of the bits to be considered bad when decoding  the bad pixel mask pixel values. (long; default: 2144337919) [default=2144337919].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.pre_overscan_corr">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">pre_overscan_corr</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.pre_overscan_corr" title="Permalink to this definition"></a></dt>
<dd><p>pre-overscan correction.0: no correction1: mean overscan correction2:  mean prescan correction3: (mean pre+mean overscan)/2 correction (long;  default: 1) [default=1].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.stack_method">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">stack_method</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.stack_method" title="Permalink to this definition"></a></dt>
<dd><p>Method used to build master frame. (str; default: &#8216;median&#8217;) [default=&#8221;median&#8221;].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.klow">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">klow</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.klow" title="Permalink to this definition"></a></dt>
<dd><p>Kappa used to clip low level values, when method is set to &#8216;mean&#8217;  (float; default: 5.0) [default=5.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.khigh">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">khigh</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.khigh" title="Permalink to this definition"></a></dt>
<dd><p>Kappa used to clip high level values, when method is set to &#8216;mean&#8217;  (float; default: 5.0) [default=5.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.background_edges_margin">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">background_edges_margin</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.background_edges_margin" title="Permalink to this definition"></a></dt>
<dd><p>X margin to order edge to define background sampling points (long;  default: 1) [default=1].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.background_poly_deg_y">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">background_poly_deg_y</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.background_poly_deg_y" title="Permalink to this definition"></a></dt>
<dd><p>Poly mode fit deg along Y. (long; default: 9) [default=9].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.background_poly_deg_x">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">background_poly_deg_x</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.background_poly_deg_x" title="Permalink to this definition"></a></dt>
<dd><p>Poly mode fit deg along X. (long; default: 9) [default=9].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.background_poly_kappa">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">background_poly_kappa</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.background_poly_kappa" title="Permalink to this definition"></a></dt>
<dd><p>Poly mode kappa value of kappa-sigma-clip outliers removal. (float;  default: 10.0) [default=10.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.removecrhsingle_sigmalim">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">removecrhsingle_sigmalim</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.removecrhsingle_sigmalim" title="Permalink to this definition"></a></dt>
<dd><p>Poisson fluctuation threshold to flag CRHs (see van Dokkum,  PASP,113,2001,p1420-27) (float; default: 20.0) [default=20.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.removecrhsingle_flim">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">removecrhsingle_flim</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.removecrhsingle_flim" title="Permalink to this definition"></a></dt>
<dd><p>Minimum contrast between the Laplacian image and the fine structure  image that a point must have to be flagged as CRH. (see van Dokkum,  PASP,113,2001,p1420-27) (float; default: 2.0) [default=2.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.removecrhsingle_niter">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">removecrhsingle_niter</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.removecrhsingle_niter" title="Permalink to this definition"></a></dt>
<dd><p>Max number of iterations (long; default: 4) [default=4].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.rectify_kernel">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">rectify_kernel</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.rectify_kernel" title="Permalink to this definition"></a></dt>
<dd><p>Name of the Interpolation Kernel Used. Possible values are:  tanh,  sinc, sinc2, lanczos, hamming, hann. (str; default: &#8216;tanh&#8217;) [default=&#8221;tanh&#8221;].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.rectify_radius">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">rectify_radius</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.rectify_radius" title="Permalink to this definition"></a></dt>
<dd><p>Rectify Interpolation radius [bin units]. (float; default: 2.0) [default=2.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.rectify_bin_lambda">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">rectify_bin_lambda</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.rectify_bin_lambda" title="Permalink to this definition"></a></dt>
<dd><p>Wavelength step in the output spectrum [nm] (float; default: -1.0) [default=-1.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.rectify_bin_slit">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">rectify_bin_slit</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.rectify_bin_slit" title="Permalink to this definition"></a></dt>
<dd><p>Spatial step along the slit in the output spectrum [arcsec] (float;  default: -1.0) [default=-1.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_method">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_method</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_method" title="Permalink to this definition"></a></dt>
<dd><p>Localization method (MANUAL, MAXIMUM, GAUSSIAN) used to detect the  object centroid and height on the slit (str; default: &#8216;MANUAL&#8217;) [default=&#8221;MANUAL&#8221;].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_chunk_nb">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_chunk_nb</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_chunk_nb" title="Permalink to this definition"></a></dt>
<dd><p>Number of chunks in the full spectrum to localize the object (long;  default: 10) [default=10].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_thresh">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_thresh</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_thresh" title="Permalink to this definition"></a></dt>
<dd><p>Threshold relative to the peak intensity below which the edges of the  object are detected for MAXIMUM localization (float; default: 0.1) [default=0.1].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_deg_lambda">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_deg_lambda</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_deg_lambda" title="Permalink to this definition"></a></dt>
<dd><p>Degree in lambda in the localization polynomial expression  slit=f(lambda), used only for MAXIMUM and GAUSSIAN (long; default: 0) [default=0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_slit_position">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_slit_position</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_slit_position" title="Permalink to this definition"></a></dt>
<dd><p>Object position on the slit for MANUAL localization [arcsec] (float;  default: 0.0) [default=0.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_slit_hheight">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_slit_hheight</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_slit_hheight" title="Permalink to this definition"></a></dt>
<dd><p>Object half height on the slit for MANUAL localization [arcsec]  (float; default: 2.0) [default=2.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_kappa">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_kappa</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_kappa" title="Permalink to this definition"></a></dt>
<dd><p>Kappa value for sigma clipping in the localization polynomial fit  (float; default: 3.0) [default=3.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_niter">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_niter</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_niter" title="Permalink to this definition"></a></dt>
<dd><p>Number of iterations for sigma clipping in the localization polynomial  fit (long; default: 3) [default=3].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.localize_use_skymask">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">localize_use_skymask</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.localize_use_skymask" title="Permalink to this definition"></a></dt>
<dd><p>TRUE if we want to mask sky lines using SKY_LINE_LIST file. (bool;  default: False) [default=False].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_subtract">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_subtract</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_subtract" title="Permalink to this definition"></a></dt>
<dd><p>TRUE to use subtract sky single. (bool; default: True) [default=True].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_bspline_nbkpts_first">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_bspline_nbkpts_first</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_bspline_nbkpts_first" title="Permalink to this definition"></a></dt>
<dd><p>Nb of break points for Bezier curve fitting (without localization)  (long; default: 3000) [default=3000].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_bspline_nbkpts_second">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_bspline_nbkpts_second</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_bspline_nbkpts_second" title="Permalink to this definition"></a></dt>
<dd><p>Nb of break points for Bezier curve fitting (with localization) (long;  default: 3000) [default=3000].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_bspline_order">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_bspline_order</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_bspline_order" title="Permalink to this definition"></a></dt>
<dd><p>Bezier spline order (long; default: 7) [default=7].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_bspline_niter">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_bspline_niter</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_bspline_niter" title="Permalink to this definition"></a></dt>
<dd><p>Nb of iterations (long; default: 20) [default=20].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_bspline_kappa">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_bspline_kappa</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_bspline_kappa" title="Permalink to this definition"></a></dt>
<dd><p>Kappa value used to kappa-sigma-clip object (float; default: 5.0) [default=5.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_method">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_method</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_method" title="Permalink to this definition"></a></dt>
<dd><p>Sky subtract Method (BSPLINE, MEDIAN) (str; default: &#8216;MEDIAN&#8217;) [default=&#8221;MEDIAN&#8221;].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.bspline_sampling">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">bspline_sampling</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.bspline_sampling" title="Permalink to this definition"></a></dt>
<dd><p>BSPLINE sampling. UNIFORM-uses the user defined nbkpts value,  corrected for binning, for all orders. FINE: multiplies the user  defined nbkpts value, corrected for binning, by a hard coded  coefficient optimized on each arm-order) (str; default: &#8216;FINE&#8217;) [default=&#8221;FINE&#8221;].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_median_hsize">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_median_hsize</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_median_hsize" title="Permalink to this definition"></a></dt>
<dd><p>Half size of the running median. If sky-method=MEDIAN . (long;  default: 20) [default=20].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_slit_edges_mask">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_slit_edges_mask</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_slit_edges_mask" title="Permalink to this definition"></a></dt>
<dd><p>Size of edges mask in arcsec (float; default: 0.5) [default=0.5].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_position1">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_position1</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_position1" title="Permalink to this definition"></a></dt>
<dd><p>Central position of the sky window #1 [arcsec] (float; default: 0.0) [default=0.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_hheight1">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_hheight1</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_hheight1" title="Permalink to this definition"></a></dt>
<dd><p>Half size of sky window #1 [arcsec] (float; default: 0.0) [default=0.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_position2">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_position2</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_position2" title="Permalink to this definition"></a></dt>
<dd><p>Central position of the sky window #2 [arcsec] (float; default: 0.0) [default=0.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.sky_hheight2">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">sky_hheight2</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.sky_hheight2" title="Permalink to this definition"></a></dt>
<dd><p>Half size of the sky window #2 [arcsec] (float; default: 0.0) [default=0.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.stdextract_interp_hsize">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">stdextract_interp_hsize</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.stdextract_interp_hsize" title="Permalink to this definition"></a></dt>
<dd><p>Half size of mask used to define object cross order profile (long;  default: 30) [default=30].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.do_optextract">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">do_optextract</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.do_optextract" title="Permalink to this definition"></a></dt>
<dd><p>TRUE if we do the optimal extraction (bool; default: False) [default=False].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_oversample">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_oversample</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_oversample" title="Permalink to this definition"></a></dt>
<dd><p>Oversample factor for the science image (long; default: 5) [default=5].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_box_half_size">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_box_half_size</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_box_half_size" title="Permalink to this definition"></a></dt>
<dd><p>Extraction box [pixel] (long; default: 10) [default=10].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_chunk_size">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_chunk_size</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_chunk_size" title="Permalink to this definition"></a></dt>
<dd><p>Chunk size [bin] (long; default: 50) [default=50].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_step_lambda">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_step_lambda</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_step_lambda" title="Permalink to this definition"></a></dt>
<dd><p>Lambda step [nm] (float; default: 0.02) [default=0.02].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_clip_kappa">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_clip_kappa</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_clip_kappa" title="Permalink to this definition"></a></dt>
<dd><p>Kappa for cosmics ray hits rejection (float; default: 3.0) [default=3.0].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_clip_frac">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_clip_frac</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_clip_frac" title="Permalink to this definition"></a></dt>
<dd><p>Maximum bad pixels fraction for cosmics ray hits rejection (float;  default: 0.4) [default=0.4].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_clip_niter">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_clip_niter</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_clip_niter" title="Permalink to this definition"></a></dt>
<dd><p>Maximum number of iterations for cosmics ray hits rejection (long;  default: 2) [default=2].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_niter">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_niter</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_niter" title="Permalink to this definition"></a></dt>
<dd><p>Number of iterations (long; default: 1) [default=1].</p>
</dd></dl>

<dl class="attribute">
<dt id="xsh_scired_slit_stare.param.optextract_method">
<tt class="descclassname">xsh_scired_slit_stare.param.</tt><tt class="descname">optextract_method</tt><a class="headerlink" href="#xsh_scired_slit_stare.param.optextract_method" title="Permalink to this definition"></a></dt>
<dd><p>Extraction method GAUSSIAN | GENERAL (str; default: &#8216;GAUSSIAN&#8217;) [default=&#8221;GAUSSIAN&#8221;].</p>
</dd></dl>

<p>The following code snippet shows the default settings for the available
parameters.</p>
<div class="highlight-python"><div class="highlight"><pre><span class="kn">import</span> <span class="nn">cpl</span>
<span class="n">xsh_scired_slit_stare</span> <span class="o">=</span> <span class="n">cpl</span><span class="o">.</span><span class="n">Recipe</span><span class="p">(</span><span class="s">&quot;xsh_scired_slit_stare&quot;</span><span class="p">)</span>

<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">keep_temp</span> <span class="o">=</span> <span class="s">&quot;no&quot;</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">debug_level</span> <span class="o">=</span> <span class="s">&quot;none&quot;</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">time_stamp</span> <span class="o">=</span> <span class="bp">False</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">decode_bp</span> <span class="o">=</span> <span class="mi">2144337919</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">pre_overscan_corr</span> <span class="o">=</span> <span class="mi">1</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">stack_method</span> <span class="o">=</span> <span class="s">&quot;median&quot;</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">klow</span> <span class="o">=</span> <span class="mf">5.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">khigh</span> <span class="o">=</span> <span class="mf">5.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">background_edges_margin</span> <span class="o">=</span> <span class="mi">1</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">background_poly_deg_y</span> <span class="o">=</span> <span class="mi">9</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">background_poly_deg_x</span> <span class="o">=</span> <span class="mi">9</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">background_poly_kappa</span> <span class="o">=</span> <span class="mf">10.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">removecrhsingle_sigmalim</span> <span class="o">=</span> <span class="mf">20.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">removecrhsingle_flim</span> <span class="o">=</span> <span class="mf">2.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">removecrhsingle_niter</span> <span class="o">=</span> <span class="mi">4</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">rectify_kernel</span> <span class="o">=</span> <span class="s">&quot;tanh&quot;</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">rectify_radius</span> <span class="o">=</span> <span class="mf">2.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">rectify_bin_lambda</span> <span class="o">=</span> <span class="o">-</span><span class="mf">1.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">rectify_bin_slit</span> <span class="o">=</span> <span class="o">-</span><span class="mf">1.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_method</span> <span class="o">=</span> <span class="s">&quot;MANUAL&quot;</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_chunk_nb</span> <span class="o">=</span> <span class="mi">10</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_thresh</span> <span class="o">=</span> <span class="mf">0.1</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_deg_lambda</span> <span class="o">=</span> <span class="mi">0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_slit_position</span> <span class="o">=</span> <span class="mf">0.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_slit_hheight</span> <span class="o">=</span> <span class="mf">2.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_kappa</span> <span class="o">=</span> <span class="mf">3.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_niter</span> <span class="o">=</span> <span class="mi">3</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">localize_use_skymask</span> <span class="o">=</span> <span class="bp">False</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_subtract</span> <span class="o">=</span> <span class="bp">True</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_bspline_nbkpts_first</span> <span class="o">=</span> <span class="mi">3000</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_bspline_nbkpts_second</span> <span class="o">=</span> <span class="mi">3000</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_bspline_order</span> <span class="o">=</span> <span class="mi">7</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_bspline_niter</span> <span class="o">=</span> <span class="mi">20</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_bspline_kappa</span> <span class="o">=</span> <span class="mf">5.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_method</span> <span class="o">=</span> <span class="s">&quot;MEDIAN&quot;</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">bspline_sampling</span> <span class="o">=</span> <span class="s">&quot;FINE&quot;</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_median_hsize</span> <span class="o">=</span> <span class="mi">20</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_slit_edges_mask</span> <span class="o">=</span> <span class="mf">0.5</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_position1</span> <span class="o">=</span> <span class="mf">0.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_hheight1</span> <span class="o">=</span> <span class="mf">0.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_position2</span> <span class="o">=</span> <span class="mf">0.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">sky_hheight2</span> <span class="o">=</span> <span class="mf">0.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">stdextract_interp_hsize</span> <span class="o">=</span> <span class="mi">30</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">do_optextract</span> <span class="o">=</span> <span class="bp">False</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_oversample</span> <span class="o">=</span> <span class="mi">5</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_box_half_size</span> <span class="o">=</span> <span class="mi">10</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_chunk_size</span> <span class="o">=</span> <span class="mi">50</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_step_lambda</span> <span class="o">=</span> <span class="mf">0.02</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_clip_kappa</span> <span class="o">=</span> <span class="mf">3.0</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_clip_frac</span> <span class="o">=</span> <span class="mf">0.4</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_clip_niter</span> <span class="o">=</span> <span class="mi">2</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_niter</span> <span class="o">=</span> <span class="mi">1</span>
<span class="n">xsh_scired_slit_stare</span><span class="o">.</span><span class="n">param</span><span class="o">.</span><span class="n">optextract_method</span> <span class="o">=</span> <span class="s">&quot;GAUSSIAN&quot;</span>
</pre></div>
</div>
<p>You may also set or overwrite some or all parameters by the recipe
parameter <cite>param</cite>, as shown in the following example:</p>
<div class="highlight-python"><div class="highlight"><pre><span class="kn">import</span> <span class="nn">cpl</span>
<span class="n">xsh_scired_slit_stare</span> <span class="o">=</span> <span class="n">cpl</span><span class="o">.</span><span class="n">Recipe</span><span class="p">(</span><span class="s">&quot;xsh_scired_slit_stare&quot;</span><span class="p">)</span>
<span class="p">[</span><span class="o">...</span><span class="p">]</span>
<span class="n">res</span> <span class="o">=</span> <span class="n">xsh_scired_slit_stare</span><span class="p">(</span> <span class="o">...</span><span class="p">,</span> <span class="n">param</span> <span class="o">=</span> <span class="p">{</span><span class="s">&quot;keep_temp&quot;</span><span class="p">:</span><span class="s">&quot;no&quot;</span><span class="p">,</span> <span class="s">&quot;debug_level&quot;</span><span class="p">:</span><span class="s">&quot;none&quot;</span><span class="p">})</span>
</pre></div>
</div>
<div class="admonition seealso">
<p class="first admonition-title">See also</p>
<p class="last"><a class="reference external" href="http://packages.python.org/python-cpl/recipe.html">cpl.Recipe</a>
for more information about the recipe object.</p>
</div>
</div>
<div class="section" id="bug-reports">
<h2>Bug reports<a class="headerlink" href="#bug-reports" title="Permalink to this headline"></a></h2>
<p>Please report any problems to <a class="reference external" href="mailto:amodigli&#37;&#52;&#48;eso&#46;org">P<span>&#46;</span>Goldoni, L<span>&#46;</span>Guglielmi, R<span>&#46;</span> Haigron, F<span>&#46;</span> Royer, D<span>&#46;</span> Bramich, A<span>&#46;</span> Modigliani</a>. Alternatively, you may
send a report to the <a class="reference external" href="mailto:usd-help&#37;&#52;&#48;eso&#46;org">ESO User Support Department</a>.</p>
</div>
<div class="section" id="copyright">
<h2>Copyright<a class="headerlink" href="#copyright" title="Permalink to this headline"></a></h2>
<p>This file is part of the X-shooter Instrument Pipeline
Copyright (C) 2006 European Southern Observatory</p>
<p>This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.</p>
<p>This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
GNU General Public License for more details.</p>
<p>You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston,
MA  02111-1307  USA</p>
<p><em>Code author: P.Goldoni, L.Guglielmi, R. Haigron, F. Royer, D. Bramich, A. Modigliani &lt;<a class="reference external" href="mailto:amodigli&#37;&#52;&#48;eso&#46;org">amodigli<span>&#64;</span>eso<span>&#46;</span>org</a>&gt;</em></p>
</div>
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