This file is indexed.

/usr/share/dynare/matlab/bvar_irf.m is in dynare-common 4.4.1-1build1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
function bvar_irf(nlags,identification)
% builds IRFs for a bvar model
%
% INPUTS
%    nlags            [integer]     number of lags for the bvar
%    identification   [string]      identification scheme ('Cholesky' or 'SquareRoot')
%
% OUTPUTS
%    none
%
% SPECIAL REQUIREMENTS
%    none

% Copyright (C) 2007-2012 Dynare Team
%
% This file is part of Dynare.
%
% Dynare is free software: you can redistribute it and/or modify
% it under the terms of the GNU General Public License as published by
% the Free Software Foundation, either version 3 of the License, or
% (at your option) any later version.
%
% Dynare is distributed in the hope that it will be useful,
% but WITHOUT ANY WARRANTY; without even the implied warranty of
% MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
% GNU General Public License for more details.
%
% You should have received a copy of the GNU General Public License
% along with Dynare.  If not, see <http://www.gnu.org/licenses/>.

global options_ oo_ M_

if nargin==1
    identification = 'Cholesky';
end

[ny, nx, posterior, prior] = bvar_toolbox(nlags);

S_inv_upper_chol = chol(inv(posterior.S));

% Option 'lower' of chol() not available in old versions of
% Matlab, so using transpose
XXi_lower_chol = chol(posterior.XXi)';

k = ny*nlags+nx;

% Declaration of the companion matrix
Companion_matrix = diag(ones(ny*(nlags-1),1),-ny);

% Number of explosive VAR models sampled
p = 0;

% Initialize a four dimensional array.
sampled_irfs = NaN(ny, ny, options_.irf, options_.bvar_replic);

for draw=1:options_.bvar_replic
    
    % Get a covariance matrix from an inverted Wishart distribution.
    Sigma = rand_inverse_wishart(ny, posterior.df, S_inv_upper_chol);
    Sigma_upper_chol = chol(Sigma);
    Sigma_lower_chol = transpose(Sigma_upper_chol);

    % Get the Autoregressive matrices from a matrix variate distribution.
    Phi = rand_matrix_normal(k, ny, posterior.PhiHat, Sigma_lower_chol, XXi_lower_chol);
    
    % Form the companion matrix.
    Companion_matrix(1:ny,:) = transpose(Phi(1:ny*nlags,:)); 
    
    % All the eigenvalues of the companion matrix have to be on or
    % inside the unit circle to rule out explosive time series.
    test = (abs(eig(Companion_matrix)));
    if any(test>1.0000000000001)
        p = p+1;
    end

    if strcmpi(identification,'Cholesky')
        StructuralMat = Sigma_lower_chol;
    elseif strcmpi(identification,'SquareRoot')
        StructuralMat = sqrtm(Sigma);
    end
    
    % Build the IRFs...
    lags_data = zeros(ny,ny*nlags) ;
    sampled_irfs(:,:,1,draw) = Sigma_lower_chol ;
    lags_data(:,1:ny) = Sigma_lower_chol ;
    for t=2:options_.irf
        sampled_irfs(:,:,t,draw) = lags_data(:,:)*Phi(1:ny*nlags,:) ;
        lags_data(:,ny+1:end) = lags_data(:,1:end-ny) ;
        lags_data(:,1:ny) = sampled_irfs(:,:,t,draw) ;
    end
    
end

if p > 0
    skipline()
    disp(['Some of the VAR models sampled from the posterior distribution'])
    disp(['were found to be explosive (' int2str(p) ' samples).'])
    skipline()
end

posterior_mean_irfs = mean(sampled_irfs,4);
posterior_variance_irfs = var(sampled_irfs, 1, 4);

sorted_irfs = sort(sampled_irfs,4);
sort_idx = round((0.5 + [-options_.conf_sig, options_.conf_sig, .0]/2) * options_.bvar_replic);

posterior_down_conf_irfs = sorted_irfs(:,:,:,sort_idx(1));
posterior_up_conf_irfs = sorted_irfs(:,:,:,sort_idx(2));
posterior_median_irfs = sorted_irfs(:,:,:,sort_idx(3));   

number_of_columns = fix(sqrt(ny));
number_of_rows = ceil(ny / number_of_columns) ;

% Plots of the IRFs
for shock=1:ny
    figure('Name',['Posterior BVAR Impulse Responses (shock in equation ' int2str(shock) ').']);
    for variable=1:ny
        subplot(number_of_rows,number_of_columns,variable);
        h1 = area(1:options_.irf,squeeze(posterior_up_conf_irfs(shock,variable,:)));
        set(h1,'BaseValue',min([min(posterior_up_conf_irfs(shock,variable,:)),min(posterior_down_conf_irfs(shock,variable,:))]))
        set(h1,'FaceColor',[.9 .9 .9])
        hold on
        h2 = area(1:options_.irf,squeeze(posterior_down_conf_irfs(shock,variable,:)));
        set(h2,'BaseValue',min([min(posterior_up_conf_irfs(shock,variable,:)),min(posterior_down_conf_irfs(shock,variable,:))]))
        set(h2,'FaceColor',[1 1 1])
        plot(1:options_.irf,squeeze(posterior_median_irfs(shock,variable,:)),'-k','linewidth',2)
        axis tight
        hold off
    end
end

% Save intermediate results
DirectoryName = [ M_.fname '/bvar_irf' ];
if ~isdir(DirectoryName)
    mkdir('.',DirectoryName);
end
save([ DirectoryName '/simulations.mat'], 'sampled_irfs');

% Save results in oo_
for i=1:ny
    shock_name = options_.varobs(i, :);
    for j=1:ny
        variable_name = options_.varobs(j, :);
        eval(['oo_.bvar.irf.Mean.' variable_name '.' shock_name ' = posterior_mean_irfs(' int2str(j) ',' int2str(i) ',:);'])
        eval(['oo_.bvar.irf.Median.' variable_name '.' shock_name ' = posterior_median_irfs(' int2str(j) ',' int2str(i) ',:);'])
        eval(['oo_.bvar.irf.Var.' variable_name '.' shock_name ' = posterior_variance_irfs(' int2str(j) ',' int2str(i) ',:);'])
        eval(['oo_.bvar.irf.Upper_bound.' variable_name '.' shock_name ' = posterior_up_conf_irfs(' int2str(j) ',' int2str(i) ',:);'])
        eval(['oo_.bvar.irf.Lower_bound.' variable_name '.' shock_name ' = posterior_down_conf_irfs(' int2str(j) ',' int2str(i) ',:);'])
    end
end