/etc/getData.conf.d/dog.getData.mk is in getdata 0.2-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 | SHARED_WGET_OPTIONS=$(shell getData --getWgetOptions)
get:
wget $(SHARED_WGET_OPTIONS) ftp://ftp.ensembl.org/pub/current_fasta/canis_familiaris/dna/Canis_familiaris.BROADD2.50.dna.chromosome.*.fa.gz
unpack:
for file in *chromosome.*.fa.gz ; do zcat $$file > `basename $$file .gz` ; done
blast:
cat *fa | formatdb -i /dev/stdin -t CanFam2.0 -n canfam2 -p F
deb:
equivs-build /etc/getData.conf.d/dog.getData.control
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