This file is indexed.

/usr/include/LLNL_FEI_Fei.h is in libhypre-dev 2.8.0b-1build1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
/*BHEADER**********************************************************************
 * Copyright (c) 2008,  Lawrence Livermore National Security, LLC.
 * Produced at the Lawrence Livermore National Laboratory.
 * This file is part of HYPRE.  See file COPYRIGHT for details.
 *
 * HYPRE is free software; you can redistribute it and/or modify it under the
 * terms of the GNU Lesser General Public License (as published by the Free
 * Software Foundation) version 2.1 dated February 1999.
 *
 * $Revision: 2.6 $
 ***********************************************************************EHEADER*/




/***************************************************************************
  Module:  LLNL_FEI_Fei.h
  Purpose: custom implementation of the FEI
 ***************************************************************************/

#ifndef _LLNL_FEI_FEI_H_
#define _LLNL_FEI_FEI_H_

#include "LLNL_FEI_Matrix.h"

/**************************************************************************
 definition of the class to capture the FEI information 
---------------------------------------------------------------------------*/

class LLNL_FEI_Elem_Block {
 
   int    blockID_;
   int    numElems_;
   int    nodeDOF_;
   int    *elemIDs_;
   int    **elemNodeLists_;
   int    *sortedIDs_;
   int    *sortedIDAux_;
   double **elemMatrices_;
   double **rhsVectors_;
   double **solnVectors_;
   int    nodesPerElem_;
   int    currElem_;
   double *tempX_;
   double *tempY_;

public :

   LLNL_FEI_Elem_Block(int blockID);
   ~LLNL_FEI_Elem_Block();
   int    getElemBlockID()     {return blockID_;}
   int    getNumElems()        {return numElems_;}
   int    getElemNumNodes()    {return nodesPerElem_;}
   int    getCurrentElem()     {return currElem_;}
   int    **getElemNodeLists() {return elemNodeLists_;}
   double **getElemMatrices()  {return elemMatrices_;}
   double **getRHSVectors()    {return rhsVectors_;}
   double **getSolnVectors()   {return solnVectors_;}

   int    initialize(int numElems, int nNodesPerElem, int nodeDOF);
   int    reset();
   int    resetRHSVectors(double s);
   int    resetSolnVectors(double s);

   int    loadElemInfo(int elemID, int *elemNodeList, double **elemStiff,   
                       double *elemRHS);
   int    loadElemMatrix(int elemID, int *elemNodeList, double **elemStiff);
   int    loadElemRHS(int elemID, double *elemRHS);

   int    checkLoadComplete();
};

/**************************************************************************
 definition of the class to capture the FEI information 
---------------------------------------------------------------------------*/

class LLNL_FEI_Fei 
{
   MPI_Comm mpiComm_;
   int      mypid_;
   int      outputLevel_;
   int      numBlocks_;
   LLNL_FEI_Elem_Block **elemBlocks_;

   int    numLocalNodes_;
   int    numExtNodes_;
   int    nodeDOF_;
   int    *nodeGlobalIDs_;
   int    *nodeExtNewGlobalIDs_;
   int    *globalNodeOffsets_;
   int    *globalCROffsets_;

   int    numCRMult_;
   int    CRListLen_;
   int    **CRNodeLists_;
   int    CRFieldID_;
   double **CRWeightLists_;
   double *CRValues_;

   int    numSharedNodes_;
   int    *sharedNodeIDs_;
   int    *sharedNodeNProcs_;
   int    **sharedNodeProcs_;

   int    nRecvs_;
   int    *recvLengs_;
   int    *recvProcs_;
   int    *recvProcIndices_;

   int    nSends_;
   int    *sendLengs_;
   int    *sendProcs_;
   int    *sendProcIndices_;

   int    numBCNodes_;
   int    *BCNodeIDs_;
   double **BCNodeAlpha_;
   double **BCNodeBeta_;
   double **BCNodeGamma_;

   LLNL_FEI_Matrix *matPtr_;
   double *solnVector_;
   double *rhsVector_;

   int    FLAG_LoadComplete_;
   double TimerLoad_;
   double TimerLoadStart_;
   double TimerSolve_;
   double TimerSolveStart_;

public :

   LLNL_FEI_Fei(MPI_Comm comm);
   ~LLNL_FEI_Fei();
   int  parameters(int numParams, char **paramString);

   int  initFields(int numFields, int *fieldSizes, int *fieldIDs);

   int  initElemBlock(int elemBlockID, int numElements, 
                      int numNodesPerElement, int *numFieldsPerNode, 
                      int **nodalFieldIDs, int numElemDOFFieldsPerElement, 
                      int *elemDOFFieldIDs, int interleaveStrategy);

   int  initElem(int elemBlockID, int elemID, int *elemConn) 
                      {(void) elemBlockID; (void) elemID; (void) elemConn;
                       return 0;}

   int  initSharedNodes(int nShared, int *sharedIDs, int *sharedLeng, 
                        int **sharedProcs);

   int  initComplete() {return 0;}

   int  resetSystem(double s);

   int  resetMatrix(double s);

   int  resetRHSVector(double s);

   int  resetInitialGuess(double s);

   int  loadNodeBCs(int nNodes, int *nodeIDs, int fieldID, double **alpha, 
                    double **beta, double **gamma);

   int  sumInElem(int elemBlock, int elemID, int *elemConn, 
                  double **elemStiff, double *elemLoad, int elemFormat);

   int  sumInElemMatrix(int elemBlock, int elemID, int* elemConn, 
                        double **elemStiffness, int elemFormat);

   int  sumInElemRHS(int elemBlock, int elemID, int *elemConn,
                     double *elemLoad);

   int  loadComplete();

   int  getNumBlockActNodes(int blockID, int *nNodes);
   int  getNumBlockActEqns(int blockID, int *nEqns);
   int  getBlockNodeIDList(int blockID, int numNodes, int *nodeIDList);
   int  getBlockNodeSolution(int blockID, int numNodes, int *nodeIDList,
                             int *solnOffsets, double *solnValues);

   int  initCRMult(int CRListLen,int *CRNodeList,int *CRFieldList,int *CRID);
   int  loadCRMult(int CRID, int CRListLen, int *CRNodeList, int *CRFieldList,
                   double *CRWeightList, double CRValue);

private:
   void assembleRHSVector();
   void assembleSolnVector();
   void buildGlobalMatrixVector();
   void IntSort(int *, int, int);
   void IntSort2a(int *, double *, int, int);
   void scatterDData(double *x);
   void gatherAddDData(double *x);
   void gatherIData(int *x, int *y);
   void gatherDData(double *x, double *y);
   void sortSharedNodes();
   void composeOrderedNodeIDList(int **nodeIDs, int **nodeIDAux, 
                                 int *totalNNodes, int *CRNNodes);
   void findSharedNodeProcs(int *nodeIDs, int *nodeIDAux, int totalNNodes, 
                            int CRNNodes, int **sharedNodePInfo) ;
   void findSharedNodeOwners( int *sharedNodePInfo );
   void setupCommPattern( int *sharedNodePInfo );
   void modifyCommPattern(int *nrecvs, int **recvlengs, int **recvprocs, 
                          int **recvindices, int *nsends, int **sendlengs, 
                          int **sendprocs, int **sendIndices);
   void fetchExtEqnList(int **eqnList);

public:
   void   getRHSVector(double **rhs) {(*rhs) = rhsVector_;}
   void   getSolnVector(double **soln) {(*soln) = solnVector_;}
   void   getMatrix(LLNL_FEI_Matrix **mat);
   void   disassembleSolnVector(double *);
   static void IntSort2(int *, int *, int, int);
};

#endif /* endif for _LLNL_FEI_FEI_H_ */