/usr/share/php/kohana3.2/application/ is in libkohana3.2-core-php 3.2.2-1.
This file is owned by root:root, with mode 0o755.
..
/usr/share/php/kohana3.2/application/bootstrap.php
/usr/share/php/kohana3.2/application/cache/
/usr/share/php/kohana3.2/application/classes/
/usr/share/php/kohana3.2/application/classes/controller/
/usr/share/php/kohana3.2/application/classes/controller/welcome.php
/usr/share/php/kohana3.2/application/classes/model/
/usr/share/php/kohana3.2/application/config/
/usr/share/php/kohana3.2/application/i18n/
/usr/share/php/kohana3.2/application/logs/
/usr/share/php/kohana3.2/application/logs/2011/
/usr/share/php/kohana3.2/application/logs/2011/06/
/usr/share/php/kohana3.2/application/logs/2011/06/27.php
/usr/share/php/kohana3.2/application/messages/
/usr/share/php/kohana3.2/application/views/