About

This package is 12.2 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/d/debian-med/med-bio_1.13.2ubuntu3_all.deb .

View its full control file here: debian/control.

Description

Debian Med micro-biology packages

Relations

This package depends on: med-tasks (= 1.13.2ubuntu3), med-config (= 1.13.2ubuntu3).

This package recommends: abacas, acedb-other, acedb-other-belvu, acedb-other-dotter, adun.app, alien-hunter, altree, amap-align, ampliconnoise, autodock, autodock-vina, autogrid, ballview, bedtools, biomaj, blast2, bowtie, bowtie2, boxshade, bwa, cd-hit, clonalframe, clustalo, clustalw, clustalx, dialign, dialign-tx, disulfinder, dotur, dssp, embassy-domainatrix, embassy-domalign, embassy-domsearch, emboss, exonerate, fastdnaml, fastlink, fasttree, fastx-toolkit, ffindex, figtree, filo, gamgi, garlic, gbrowse, gdpc, gentle, gff2aplot, gff2ps, ghemical, glam2, grinder, gromacs, hhsuite, hmmer, infernal, jalview, jellyfish, jmol, kalign, last-align, librg-utils-perl, loki, mafft, maq, maqview, massxpert, melting, mipe, mira-assembler, mlv-smile, mothur, mrbayes, mummer, muscle, mustang, ncbi-blast+, ncbi-epcr, ncbi-tools-bin, ncbi-tools-x11, ncoils, neobio, njplot, perlprimer, phyml, picard-tools, plasmidomics, plink, poa, populations, primer3, probalign, probcons, proda, profnet-bval, profnet-chop, profnet-con, profnet-isis, profnet-md, profnet-norsnet, profnet-prof, profnet-snapfun, profphd, profphd-net, profphd-utils, proftmb, pymol, pynast, python-cogent, qiime, r-bioc-cummerbund, r-bioc-hilbertvis, r-cran-genabel, r-cran-qtl, r-other-bio3d, r-other-mott-happy, rasmol, raster3d, raxml, readseq, reprof, rnahybrid, samtools, sibsim4, sigma-align, sim4, squizz, sra-toolkit, ssake, staden-io-lib-utils, t-coffee, tabix, theseus, tigr-glimmer, tm-align, transtermhp, tree-puzzle | tree-ppuzzle, treeviewx, vcftools, velvet, wise.

This package suggests: abyss, act, amos-assembler, amoscmp, anfo, apollo, arachne, arb, artemis, asap, augustus, autodocktools, axparafit, axpcoords, bagphenotype, bambus, bamtools, beads, beast-mcmc, big-blast, bigsdb, blimps-utils, blixem, btk-core, cactus, caftools, cain, cap3, cdbfasta, cdna-db, cinema, circos, clonalorigin, clustalw-mpi, cluster3, cmap, coalesce, codonw, compclust, concavity, conservation-code, contralign, coot, copycat, crossbow, cufflinks, cytoscape, das-proserver, dazzle, decipher, e-hive, ecell, edtsurf, eigensoft, elph, embassy-phylip, emboss-explorer, ensembl, est-db, estferret, estscan, exalt, excavator, fas, fasta, fastqc, figaro, finex, fluctuate, forester, forge, galaxy, gassst, gbioseq, gbrowse-syn, genemark, genesplicer, genetrack, genezilla, genographer, genometools, glimmerhmm, gmap, gmv, grogui, haploview, hawkeye, hexamer, hilbertvisgui, hmmer2, igv, jbrowse, jigsaw, jstreeview, kempbasu, lagan, lamarc, logol-bin, logomat-m, ltrsift, lucy, macs, mage2tab, maker2, martj, maude, mauvealigner, maxd, melting-gui, meme, mesquite, metarep, microbiomeutil, migrate, minimus, mirbase, mobyle, molekel, mosaik-aligner, mozilla-biofox, mpsqed, msatfinder, mugsy, mummergpu, murasaki, mview, ncbi-seg, ngila, norsnet, norsp, nw-align, oases, obo-edit, oligoarrayaux, omegamap, operondb, pal2nal, paml, partigene, patman, patristic, pcma, pdb2pqr, pfaat, pftools, phagefinder, phpphylotree, phy-spread, phylip, phylographer, phyloviz-core, phylowin, plato, prank, predictnls, predictprotein, proalign, profbval, profisis, profit, prot4est, pscan-tfbs, psipred, pyrophosphate-tools, python-orange, python-rdkit, python-reaper, qtlcart, r-ape, r-other-valdar-bagphenotype.library, raccoon, ray-denovoassembler, rbs-finder, rdp-classifier, recombine, repeatmasker, rmblast, roche454ace2caf, rose, rosetta, sap, seaview, seq-gen, seqan-apps, seqtk, sequenceconverter.app, sga, sift, smalt, snap, snpeff, soapdenovo, spice, splitstree, spread-phy, sra-sdk, ssaha, strap, tacg, taverna, taxinspector, tetra, tigr-assembler, tigr-glimmer-mg, tophat, trace2dbest, tracetuner, treebuilder3d, treetime, treeview, tripal, trnascan-se, twain, ugene, uniprime, vegan, vienna-rna, vmd, wgs-assembler, x-tandem-pipeline, zalign, zodiac-zeden.

This package does not conflict with any other package.

Package Contents

This package is indexed.

med-bio 1.13.2ubuntu3 is in ubuntu - trusty / universe. This package's architecture is: architectureless.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 2.3 KB
prerm text/x-shellscript N/A N/A 1.7 KB
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/med-bio root:root 0o777
/usr/share/ root:root 0o755
/usr/share/blends/ root:root 0o755
/usr/share/blends/med/ root:root 0o755
/usr/share/blends/med/menu/ root:root 0o755
/usr/share/blends/med/menu/blast2 text/plain root:root 0o644 2.5 KB
/usr/share/blends/med/menu/ncbi-tools-bin text/plain root:root 0o644 3.9 KB
/usr/share/blends/med/menu/ncbi-tools-x11 text/plain root:root 0o644 1.2 KB
/usr/share/blends/tasks/ root:root 0o755
/usr/share/blends/tasks/med/ root:root 0o755
/usr/share/blends/tasks/med/bio text/plain root:root 0o644 8 bytes
/usr/share/doc/ root:root 0o755
/usr/share/doc/med-bio/ root:root 0o755
/usr/share/doc/med-bio/boxshade.txt text/plain root:root 0o644 422 bytes
/usr/share/doc/med-bio/changelog.gz root:root 0o777
/usr/share/doc/med-bio/copyright text/plain root:root 0o644 190 bytes
/usr/share/doc/med-bio/fastdnaml.html text/html root:root 0o644 1.2 KB
/usr/share/doc/med-bio/fastlink.txt text/plain root:root 0o644 452 bytes
/usr/share/doc/med-bio/gff2aplot.txt text/plain root:root 0o644 394 bytes
/usr/share/doc/med-bio/gff2ps.txt text/plain root:root 0o644 696 bytes
/usr/share/doc/med-bio/glimmer.txt text/plain root:root 0o644 964 bytes
/usr/share/doc/med-bio/hmmer.txt text/plain root:root 0o644 509 bytes
/usr/share/doc/med-bio/loki.txt text/plain root:root 0o644 641 bytes
/usr/share/doc/med-bio/mipe.txt text/plain root:root 0o644 1.4 KB
/usr/share/doc/med-bio/muscle.txt text/plain root:root 0o644 1.8 KB
/usr/share/doc/med-bio/ncbi-epcr.txt text/plain root:root 0o644 650 bytes
/usr/share/doc/med-bio/phylip.txt text/plain root:root 0o644 1.1 KB
/usr/share/doc/med-bio/poa.txt text/plain root:root 0o644 817 bytes
/usr/share/doc/med-bio/r-cran-qtl.txt text/plain root:root 0o644 1.1 KB
/usr/share/doc/med-bio/README root:root 0o777
/usr/share/doc/med-bio/README.Debian text/plain root:root 0o644 946 bytes
/usr/share/doc/med-bio/readseq.txt text/plain root:root 0o644 520 bytes
/usr/share/doc/med-bio/sim4.txt text/plain root:root 0o644 1.1 KB
/usr/share/doc/med-bio/t-coffee.txt text/plain root:root 0o644 706 bytes
/usr/share/lintian/ root:root 0o755
/usr/share/lintian/overrides/ root:root 0o755
/usr/share/lintian/overrides/med-bio text/plain root:root 0o644 180 bytes
/usr/share/man/ root:root 0o755
/usr/share/man/man1/ root:root 0o755
/usr/share/man/man1/med-bio.1.gz root:root 0o777