/usr/include/gofigure2/ConversionLsmToMegaThread.h is in libgofigure-dev 0.9.0-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 | /*=========================================================================
Authors: The GoFigure Dev. Team.
at Megason Lab, Systems biology, Harvard Medical school, 2009-11
Copyright (c) 2009-11, President and Fellows of Harvard College.
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are met:
Redistributions of source code must retain the above copyright notice,
this list of conditions and the following disclaimer.
Redistributions in binary form must reproduce the above copyright notice,
this list of conditions and the following disclaimer in the documentation
and/or other materials provided with the distribution.
Neither the name of the President and Fellows of Harvard College
nor the names of its contributors may be used to endorse or promote
products derived from this software without specific prior written
permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS
BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY,
OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT
OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE
OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
=========================================================================*/
#ifndef __ConversionLsmToMegaThread_h
#define __ConversionLsmToMegaThread_h
#include <qstring.h>
#include <qthread.h>
#include <vector>
#include "fstream"
#include "GoFigureGlobalDefinition.h"
#include "QGoGUILibConfigure.h"
class vtkLSMReader;
class QGOGUILIB_EXPORT ConversionLsmToMegaThread:public QThread
{
Q_OBJECT
public:
/**
* \brief Constructor
*/
ConversionLsmToMegaThread();
/**
* \brief Destructor
*/
virtual ~ConversionLsmToMegaThread();
/**
* \brief Set the base name of the LSM file to convert
* \param[in] iBaseName Name of the LSM file
*/
void SetBaseName(std::string iBaseName);
/**
* \brief Set the path to the LSM file to convert and initialise LSM reader
* \param[in] iLsmPath Path of the LSM file
*/
void SetLsmPath(std::string iLsmPath);
/**
* \brief Set the path of the MegaCapture file to create
* \param[in] iMegaPath Path of the MegaCapture file
*/
void SetMegaPath(std::string iMegaPath);
/**
* \brief Set the output file type
* \param[in] iFileType File type: PNG or TIFF
*/
void SetOutputFileType(const GoFigure::FileType & iFileType);
/**
* \brief Start the conversion to MegaCapture
* \param[in] iMegaPath path of the output MegaCapture file
*/
void ExportWithReimplemented(std::string iMegaPath);
/**
* \brief Returns the number of signals to be sent for the progress bar
*/
int GetNumberOfPoints();
public slots :
signals:
void ConversionTerminatedSent();
void InitialisationProgressSent();
void ProgressSent();
protected:
/**
* \brief Start multithread process (call when parameters are set up properly)
*/
void run();
private:
ConversionLsmToMegaThread(const ConversionLsmToMegaThread &);
ConversionLsmToMegaThread operator=(const ConversionLsmToMegaThread &);
std::string m_BaseName;
std::string m_LsmPath;
std::string m_MegaPath;
GoFigure::FileType m_FileType;
std::vector< vtkLSMReader * > m_LSMReaders;
unsigned int m_Plaque;
unsigned int m_Row;
unsigned int m_Column;
unsigned int m_XTile;
unsigned int m_YTile;
unsigned int m_ZTile;
double m_XOverlap;
double m_YOverlap;
double m_ZOverlap;
unsigned int m_NumberOfChannels;
unsigned int m_NumberOfTimePoints;
unsigned int m_Dim;
};
#endif
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