/usr/include/htslib/klist.h is in libhts-dev 0.2.0~rc3-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 | /* The MIT License
Copyright (c) 2008-2009, by Attractive Chaos <attractor@live.co.uk>
Permission is hereby granted, free of charge, to any person obtaining
a copy of this software and associated documentation files (the
"Software"), to deal in the Software without restriction, including
without limitation the rights to use, copy, modify, merge, publish,
distribute, sublicense, and/or sell copies of the Software, and to
permit persons to whom the Software is furnished to do so, subject to
the following conditions:
The above copyright notice and this permission notice shall be
included in all copies or substantial portions of the Software.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
SOFTWARE.
*/
#ifndef _AC_KLIST_H
#define _AC_KLIST_H
#include <stdlib.h>
#define KMEMPOOL_INIT(name, kmptype_t, kmpfree_f) \
typedef struct { \
size_t cnt, n, max; \
kmptype_t **buf; \
} kmp_##name##_t; \
static inline kmp_##name##_t *kmp_init_##name() { \
return calloc(1, sizeof(kmp_##name##_t)); \
} \
static inline void kmp_destroy_##name(kmp_##name##_t *mp) { \
size_t k; \
for (k = 0; k < mp->n; ++k) { \
kmpfree_f(mp->buf[k]); free(mp->buf[k]); \
} \
free(mp->buf); free(mp); \
} \
static inline kmptype_t *kmp_alloc_##name(kmp_##name##_t *mp) { \
++mp->cnt; \
if (mp->n == 0) return calloc(1, sizeof(kmptype_t)); \
return mp->buf[--mp->n]; \
} \
static inline void kmp_free_##name(kmp_##name##_t *mp, kmptype_t *p) { \
--mp->cnt; \
if (mp->n == mp->max) { \
mp->max = mp->max? mp->max<<1 : 16; \
mp->buf = realloc(mp->buf, sizeof(void*) * mp->max); \
} \
mp->buf[mp->n++] = p; \
}
#define kmempool_t(name) kmp_##name##_t
#define kmp_init(name) kmp_init_##name()
#define kmp_destroy(name, mp) kmp_destroy_##name(mp)
#define kmp_alloc(name, mp) kmp_alloc_##name(mp)
#define kmp_free(name, mp, p) kmp_free_##name(mp, p)
#define KLIST_INIT(name, kltype_t, kmpfree_t) \
struct __kl1_##name { \
kltype_t data; \
struct __kl1_##name *next; \
}; \
typedef struct __kl1_##name kl1_##name; \
KMEMPOOL_INIT(name, kl1_##name, kmpfree_t) \
typedef struct { \
kl1_##name *head, *tail; \
kmp_##name##_t *mp; \
size_t size; \
} kl_##name##_t; \
static inline kl_##name##_t *kl_init_##name() { \
kl_##name##_t *kl = calloc(1, sizeof(kl_##name##_t)); \
kl->mp = kmp_init(name); \
kl->head = kl->tail = kmp_alloc(name, kl->mp); \
kl->head->next = 0; \
return kl; \
} \
static inline void kl_destroy_##name(kl_##name##_t *kl) { \
kl1_##name *p; \
for (p = kl->head; p != kl->tail; p = p->next) \
kmp_free(name, kl->mp, p); \
kmp_free(name, kl->mp, p); \
kmp_destroy(name, kl->mp); \
free(kl); \
} \
static inline kltype_t *kl_pushp_##name(kl_##name##_t *kl) { \
kl1_##name *q, *p = kmp_alloc(name, kl->mp); \
q = kl->tail; p->next = 0; kl->tail->next = p; kl->tail = p; \
++kl->size; \
return &q->data; \
} \
static inline int kl_shift_##name(kl_##name##_t *kl, kltype_t *d) { \
kl1_##name *p; \
if (kl->head->next == 0) return -1; \
--kl->size; \
p = kl->head; kl->head = kl->head->next; \
if (d) *d = p->data; \
kmp_free(name, kl->mp, p); \
return 0; \
}
#define kliter_t(name) kl1_##name
#define klist_t(name) kl_##name##_t
#define kl_val(iter) ((iter)->data)
#define kl_next(iter) ((iter)->next)
#define kl_begin(kl) ((kl)->head)
#define kl_end(kl) ((kl)->tail)
#define kl_init(name) kl_init_##name()
#define kl_destroy(name, kl) kl_destroy_##name(kl)
#define kl_pushp(name, kl) kl_pushp_##name(kl)
#define kl_shift(name, kl, d) kl_shift_##name(kl, d)
#endif
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