libinsighttoolkit4-dev 4.5.0-3 / usr / include / ITK-4.5 / itkGaussianInterpolateImageFunction.h

/*=========================================================================

  Program:   Insight Segmentation & Registration Toolkit
  Module:    $RCSfile: itkGaussianInterpolateImageFunction.h,v $
  Language:  C++
  Date:      $Date: $
  Version:   $Revision: $

  Copyright (c) Insight Software Consortium. All rights reserved.
  See ITKCopyright.txt or http://www.itk.org/HTML/Copyright.htm for details.

     This software is distributed WITHOUT ANY WARRANTY; without even
     the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR
     PURPOSE.  See the above copyright notices for more information.

=========================================================================*/
#ifndef __itkGaussianInterpolateImageFunction_h
#define __itkGaussianInterpolateImageFunction_h

#include "itkInterpolateImageFunction.h"

#include "itkConceptChecking.h"
#include "itkFixedArray.h"
#include "vnl/vnl_erf.h"

namespace itk
{

/** \class GaussianInterpolateImageFunction
 * \brief Evaluates the Gaussian interpolation of an image.
 *
 * This class defines an N-dimensional Gaussian interpolation function using
 * the vnl error function.  The two parameters associated with this function
 * are:
 *   1. Sigma - a scalar array of size ImageDimension determining the width
 *      of the interpolation function.
 *   2. Alpha - a scalar specifying the cutoff distance over which the function
 *      is calculated.
 *
 * This work was originally described in the Insight Journal article:
 * P. Yushkevich, N. Tustison, J. Gee, Gaussian interpolation.
 * \sa{http://hdl.handle.net/10380/3139}
 *
 * \author Paul Yushkevich
 * \author Nick Tustison
 *
 * \ingroup ITKImageFunction
 */

template <typename TInputImage, typename TCoordRep = double>
class GaussianInterpolateImageFunction :
  public InterpolateImageFunction<TInputImage, TCoordRep>
{
public:
  /** Standard class typedefs. */
  typedef GaussianInterpolateImageFunction                 Self;
  typedef InterpolateImageFunction<TInputImage, TCoordRep> Superclass;
  typedef SmartPointer<Self>                               Pointer;
  typedef SmartPointer<const Self>                         ConstPointer;

  /** Run-time type information (and related methods). */
  itkTypeMacro( GaussianInterpolateImageFunction, InterpolateImageFunction );

  /** Method for creation through the object factory. */
  itkNewMacro( Self );

  /** ImageDimension constant */
  itkStaticConstMacro( ImageDimension, unsigned int,
    TInputImage::ImageDimension );


  /** OutputType typedef support. */
  typedef typename Superclass::OutputType OutputType;

  /** InputImageType typedef support. */
  typedef typename Superclass::InputImageType InputImageType;

  /** RealType typedef support. */
  typedef typename Superclass::RealType RealType;

  /** Index typedef support. */
  typedef typename Superclass::IndexType IndexType;

  /** ContinuousIndex typedef support. */
  typedef typename Superclass::ContinuousIndexType ContinuousIndexType;

  /** Array typedef support */
  typedef FixedArray<RealType, ImageDimension> ArrayType;

  /**
   * Set input image
   */
  virtual void SetInputImage( const TInputImage *image )
    {
    Superclass::SetInputImage( image );
    this->ComputeBoundingBox();
    }

  /**
   * Set/Get sigma
   */
  virtual void SetSigma( const ArrayType s )
    {
    itkDebugMacro( "setting Sigma to " << s );
    if( this->m_Sigma != s )
      {
      this->m_Sigma = s;
      this->ComputeBoundingBox();
      this->Modified();
      }
    }
  virtual void SetSigma( RealType *s )
    {
    ArrayType sigma;
    for( unsigned int d = 0; d < ImageDimension; d++ )
      {
      sigma[d] = s[d];
      }
    this->SetSigma( sigma );
    }
  itkGetConstMacro( Sigma, ArrayType );

  /**
   * Set/Get alpha
   */
  virtual void SetAlpha( const RealType a )
    {
    itkDebugMacro( "setting Alpha to " << a );
    if( this->m_Alpha != a )
      {
      this->m_Alpha = a;
      this->ComputeBoundingBox();
      this->Modified();
      }
    }
  itkGetConstMacro( Alpha, RealType );

  /**
   * Set/Get sigma and alpha
   */
  virtual void SetParameters( RealType *sigma, RealType alpha )
    {
    this->SetSigma( sigma );
    this->SetAlpha( alpha );
    }

  /**
   * Evaluate at the given index
   */
  virtual OutputType EvaluateAtContinuousIndex(
    const ContinuousIndexType & cindex ) const
    {
    return this->EvaluateAtContinuousIndex( cindex, NULL );
    }

protected:
  GaussianInterpolateImageFunction();
  ~GaussianInterpolateImageFunction(){};
  void PrintSelf( std::ostream& os, Indent indent ) const;

  virtual void ComputeBoundingBox();

  virtual void ComputeErrorFunctionArray( unsigned int dimension, RealType cindex,
    vnl_vector<RealType> &erfArray, vnl_vector<RealType> &gerfArray,
    bool evaluateGradient = false ) const;

  ArrayType                                 m_Sigma;
  RealType                                  m_Alpha;

  ArrayType                                 m_BoundingBoxStart;
  ArrayType                                 m_BoundingBoxEnd;
  ArrayType                                 m_ScalingFactor;
  ArrayType                                 m_CutoffDistance;

private:
  GaussianInterpolateImageFunction( const Self& ); //purposely not implemented
  void operator=( const Self& ); //purposely not implemented

  /**
   * Evaluate function value
   */
  virtual OutputType EvaluateAtContinuousIndex(
    const ContinuousIndexType &, OutputType * ) const;
};

} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkGaussianInterpolateImageFunction.hxx"
#endif

#endif