/usr/include/ITK-4.5/itkHistogram.hxx is in libinsighttoolkit4-dev 4.5.0-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 | /*=========================================================================
*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef __itkHistogram_hxx
#define __itkHistogram_hxx
#include "itkHistogram.h"
#include "itkNumericTraits.h"
namespace itk
{
namespace Statistics
{
template< typename TMeasurement, typename TFrequencyContainer >
Histogram< TMeasurement, TFrequencyContainer >
::Histogram()
{
this->m_ClipBinsAtEnds = true;
this->m_FrequencyContainer = FrequencyContainerType::New();
this->m_OffsetTable = OffsetTableType(this->GetMeasurementVectorSize() + 1);
for ( unsigned int i = 0; i < this->GetMeasurementVectorSize() + 1; i++ )
{
this->m_OffsetTable[i] = itk::NumericTraits< InstanceIdentifier >::Zero;
}
}
template< typename TMeasurement, typename TFrequencyContainer >
typename
Histogram< TMeasurement, TFrequencyContainer >::InstanceIdentifier
Histogram< TMeasurement, TFrequencyContainer >
::Size() const
{
if ( this->GetMeasurementVectorSize() == 0 )
{
return itk::NumericTraits< InstanceIdentifier >::Zero;
}
InstanceIdentifier size = 1;
for ( unsigned int i = 0; i < this->GetMeasurementVectorSize(); i++ )
{
size *= m_Size[i];
}
return size;
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::SizeType &
Histogram< TMeasurement, TFrequencyContainer >
::GetSize() const
{
return m_Size;
}
template< typename TMeasurement, typename TFrequencyContainer >
typename
Histogram< TMeasurement, TFrequencyContainer >::SizeValueType
Histogram< TMeasurement, TFrequencyContainer >
::GetSize(unsigned int dimension) const
{
return m_Size[dimension];
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::MeasurementType &
Histogram< TMeasurement, TFrequencyContainer >
::GetBinMin(unsigned int dimension, InstanceIdentifier nbin) const
{
return m_Min[dimension][nbin];
}
template< typename TMeasurement,
typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::MeasurementType &
Histogram< TMeasurement, TFrequencyContainer >
::GetBinMax(unsigned int dimension, InstanceIdentifier nbin) const
{
return m_Max[dimension][nbin];
}
template< typename TMeasurement, typename TFrequencyContainer >
void
Histogram< TMeasurement, TFrequencyContainer >
::SetBinMin(unsigned int dimension, InstanceIdentifier nbin,
MeasurementType min)
{
m_Min[dimension][nbin] = min;
}
template< typename TMeasurement, typename TFrequencyContainer >
void
Histogram< TMeasurement, TFrequencyContainer >
::SetBinMax(unsigned int dimension, InstanceIdentifier nbin,
MeasurementType max)
{
m_Max[dimension][nbin] = max;
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::BinMinVectorType &
Histogram< TMeasurement, TFrequencyContainer >
::GetDimensionMins(unsigned int dimension) const
{
return m_Min[dimension];
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::BinMaxVectorType &
Histogram< TMeasurement, TFrequencyContainer >
::GetDimensionMaxs(unsigned int dimension) const
{
return m_Max[dimension];
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::BinMinContainerType &
Histogram< TMeasurement, TFrequencyContainer >
::GetMins() const
{
return m_Min;
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::BinMaxContainerType &
Histogram< TMeasurement, TFrequencyContainer >
::GetMaxs() const
{
return m_Max;
}
template< typename TMeasurement, typename TFrequencyContainer >
typename
Histogram< TMeasurement, TFrequencyContainer >::AbsoluteFrequencyType
Histogram< TMeasurement, TFrequencyContainer >
::GetFrequency(InstanceIdentifier id) const
{
return m_FrequencyContainer->GetFrequency(id);
}
template< typename TMeasurement, typename TFrequencyContainer >
bool
Histogram< TMeasurement, TFrequencyContainer >
::SetFrequency(InstanceIdentifier id, AbsoluteFrequencyType value)
{
return m_FrequencyContainer->SetFrequency(id, value);
}
template< typename TMeasurement, typename TFrequencyContainer >
bool
Histogram< TMeasurement, TFrequencyContainer >
::IncreaseFrequency(InstanceIdentifier id, AbsoluteFrequencyType value)
{
return m_FrequencyContainer->IncreaseFrequency(id, value);
}
template< typename TMeasurement, typename TFrequencyContainer >
void
Histogram< TMeasurement, TFrequencyContainer >
::Initialize(const SizeType & size)
{
if ( this->GetMeasurementVectorSize() == 0 )
{
itkExceptionMacro("MeasurementVectorSize is Zero. It should be set to a non-zero value before calling Initialize");
}
this->m_Size = size;
// creates offset table which will be used for generation of
// instance identifiers.
InstanceIdentifier num = 1;
this->m_OffsetTable.resize(this->GetMeasurementVectorSize() + 1);
this->m_OffsetTable[0] = num;
for ( unsigned int i = 0; i < this->GetMeasurementVectorSize(); i++ )
{
num *= m_Size[i];
this->m_OffsetTable[i + 1] = num;
}
this->m_TempIndex.SetSize( this->GetMeasurementVectorSize() );
m_NumberOfInstances = num;
// adjust the sizes of min max value containers
unsigned int dim;
m_Min.resize( this->GetMeasurementVectorSize() );
for ( dim = 0; dim < this->GetMeasurementVectorSize(); dim++ )
{
m_Min[dim].resize(m_Size[dim]);
}
m_Max.resize( this->GetMeasurementVectorSize() );
for ( dim = 0; dim < this->GetMeasurementVectorSize(); dim++ )
{
m_Max[dim].resize(m_Size[dim]);
}
// initialize auxiliary variables
this->m_TempIndex.SetSize( this->GetMeasurementVectorSize() );
this->m_TempMeasurementVector.SetSize( this->GetMeasurementVectorSize() );
// initialize the frequency container
m_FrequencyContainer->Initialize(this->m_OffsetTable[this->GetMeasurementVectorSize()]);
this->SetToZero();
}
template< typename TMeasurement, typename TFrequencyContainer >
void
Histogram< TMeasurement, TFrequencyContainer >
::SetToZero()
{
m_FrequencyContainer->SetToZero();
}
template< typename TMeasurement, typename TFrequencyContainer >
void
Histogram< TMeasurement, TFrequencyContainer >
::Initialize(const SizeType & size, MeasurementVectorType & lowerBound,
MeasurementVectorType & upperBound)
{
this->Initialize(size);
float interval;
for ( unsigned int i = 0; i < this->GetMeasurementVectorSize(); i++ )
{
if ( size[i] > 0 )
{
interval = static_cast<float>( upperBound[i] - lowerBound[i] )
/ static_cast< MeasurementType >( size[i] );
// Set the min vector and max vector
for ( unsigned int j = 0; j < static_cast< unsigned int >( size[i] - 1 ); j++ )
{
this->SetBinMin( i, j, (MeasurementType)( lowerBound[i]
+ ( (float)j * interval ) ) );
this->SetBinMax( i, j, (MeasurementType)( lowerBound[i]
+ ( ( (float)j + 1 ) * interval ) ) );
}
this->SetBinMin( i, size[i] - 1,
(MeasurementType)( lowerBound[i]
+ ( ( (float)size[i] - 1 ) * interval ) ) );
this->SetBinMax( i, size[i] - 1,
(MeasurementType)( upperBound[i] ) );
}
}
}
/** */
template< typename TMeasurement, typename TFrequencyContainer >
bool Histogram< TMeasurement, TFrequencyContainer >
::GetIndex(const MeasurementVectorType & measurement, IndexType & index) const
{
// now using something similar to binary search to find
// index.
unsigned int dim;
if ( index.Size() != this->GetMeasurementVectorSize() )
{
index.SetSize( this->GetMeasurementVectorSize() );
}
int begin;
int mid;
int end;
MeasurementType median;
MeasurementType tempMeasurement;
for ( dim = 0; dim < this->GetMeasurementVectorSize(); dim++ )
{
tempMeasurement = measurement[dim];
begin = 0;
if ( tempMeasurement < m_Min[dim][begin] )
{
// one of measurement is below the minimum
// its ok if we extend the bins to infinity.. not ok if we don't
if ( !m_ClipBinsAtEnds )
{
index[dim] = (IndexValueType)0;
continue;
}
else
{ // set an illegal value and return 0
index[dim] = (IndexValueType)m_Size[dim];
return false;
}
}
end = m_Min[dim].size() - 1;
if ( tempMeasurement >= m_Max[dim][end] )
{
// one of measurement is above the maximum
// its ok if we extend the bins to infinity.. not ok if we don't
// Need to include the last endpoint in the last bin.
if ( !m_ClipBinsAtEnds || tempMeasurement == m_Max[dim][end])
{
index[dim] = (IndexValueType)m_Size[dim] - 1;
continue;
}
else
{ // set an illegal value and return 0
index[dim] = (IndexValueType)m_Size[dim];
return false;
}
}
// Binary search for the bin where this measurement could be
mid = ( end + 1 ) / 2;
median = m_Min[dim][mid];
while ( true )
{
if ( tempMeasurement < median )
{
end = mid - 1;
}
else if ( tempMeasurement > median )
{
// test whether it is inside the current bin by comparing to the max of
// this bin.
if ( tempMeasurement < m_Max[dim][mid]
&& tempMeasurement >= m_Min[dim][mid] )
{
index[dim] = mid;
break;
}
// otherwise, continue binary search
begin = mid + 1;
}
else
{
index[dim] = mid;
break;
}
mid = begin + ( end - begin ) / 2;
median = m_Min[dim][mid];
} // end of while
} // end of for()
return true;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline const typename Histogram< TMeasurement, TFrequencyContainer >::IndexType &
Histogram< TMeasurement, TFrequencyContainer >
::GetIndex(InstanceIdentifier id) const
{
InstanceIdentifier id2 = id;
for ( int i = this->GetMeasurementVectorSize() - 1; i > 0; i-- )
{
m_TempIndex[i] = static_cast< IndexValueType >( id2 / this->m_OffsetTable[i] );
id2 -= ( m_TempIndex[i] * this->m_OffsetTable[i] );
}
m_TempIndex[0] = static_cast< IndexValueType >( id2 );
return m_TempIndex;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline bool
Histogram< TMeasurement, TFrequencyContainer >
::IsIndexOutOfBounds(const IndexType & index) const
{
for ( unsigned int dim = 0; dim < this->GetMeasurementVectorSize(); dim++ )
{
if ( index[dim] < 0 || index[dim] >= static_cast< IndexValueType >( m_Size[dim] ) )
{
return true;
}
}
return false;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline typename Histogram< TMeasurement, TFrequencyContainer >::InstanceIdentifier
Histogram< TMeasurement, TFrequencyContainer >
::GetInstanceIdentifier(const IndexType & index) const
{
InstanceIdentifier instanceId = 0;
for ( int i = this->GetMeasurementVectorSize() - 1; i > 0; i-- )
{
instanceId += index[i] * this->m_OffsetTable[i];
}
instanceId += index[0];
return instanceId;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline const typename Histogram< TMeasurement, TFrequencyContainer >::MeasurementType &
Histogram< TMeasurement, TFrequencyContainer >
::GetBinMinFromValue(const unsigned int dimension, const float value) const
{
// If the value is lower than any of min value in the Histogram,
// it returns the lowest min value
if ( value <= this->m_Min[dimension][0] )
{
return this->m_Min[dimension][0];
}
// If the value is higher than any of min value in the Histogram,
// it returns the highest min value
if ( value >= m_Min[dimension][m_Size[dimension] - 1] )
{
return m_Min[dimension][this->m_Size[dimension] - 1];
}
unsigned int binMinFromValue = 0;
for ( unsigned int i = 0; i < this->m_Size[dimension]; i++ )
{
if ( ( value >= this->m_Min[dimension][i] )
&& ( value < this->m_Max[dimension][i] ) )
{
binMinFromValue = i;
}
}
return this->m_Min[dimension][binMinFromValue];
}
template< typename TMeasurement, typename TFrequencyContainer >
inline const typename Histogram< TMeasurement, TFrequencyContainer >::MeasurementType &
Histogram< TMeasurement, TFrequencyContainer >
::GetBinMaxFromValue(const unsigned int dimension, const float value) const
{
// If the value is lower than any of max value in the Histogram,
// it returns the lowest max value
if ( value <= this->m_Max[dimension][0] )
{
return this->m_Max[dimension][0];
}
// If the value is higher than any of max value in the Histogram,
// it returns the highest max value
if ( value >= m_Max[dimension][m_Size[dimension] - 1] )
{
return m_Max[dimension][this->m_Size[dimension] - 1];
}
unsigned int binMaxFromValue = 0;
for ( unsigned int i = 0; i < this->m_Size[dimension]; i++ )
{
if ( ( value >= this->m_Min[dimension][i] )
&& ( value < this->m_Max[dimension][i] ) )
{
binMaxFromValue = i;
}
}
return this->m_Max[dimension][binMaxFromValue];
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::MeasurementVectorType &
Histogram< TMeasurement, TFrequencyContainer >
::GetHistogramMinFromIndex(const IndexType & index) const
{
for ( unsigned int i = 0; i < this->GetMeasurementVectorSize(); i++ )
{
m_TempMeasurementVector[i] = this->GetBinMin(i, index[i]);
}
return m_TempMeasurementVector;
}
template< typename TMeasurement, typename TFrequencyContainer >
const typename
Histogram< TMeasurement, TFrequencyContainer >::MeasurementVectorType &
Histogram< TMeasurement, TFrequencyContainer >
::GetHistogramMaxFromIndex(const IndexType & index) const
{
for ( unsigned int i = 0; i < this->GetMeasurementVectorSize(); i++ )
{
m_TempMeasurementVector[i] = this->GetBinMax(i, index[i]);
}
return m_TempMeasurementVector;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline const typename Histogram< TMeasurement, TFrequencyContainer >::MeasurementVectorType &
Histogram< TMeasurement, TFrequencyContainer >
::GetMeasurementVector(const IndexType & index) const
{
for ( unsigned int i = 0; i < this->GetMeasurementVectorSize(); i++ )
{
MeasurementType value = ( m_Min[i][index[i]] + m_Max[i][index[i]] );
m_TempMeasurementVector[i] = static_cast< MeasurementType >( value / 2.0 );
}
return m_TempMeasurementVector;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline const typename Histogram< TMeasurement, TFrequencyContainer >::MeasurementVectorType &
Histogram< TMeasurement, TFrequencyContainer >
::GetMeasurementVector(InstanceIdentifier id) const
{
return this->GetMeasurementVector( this->GetIndex(id) );
}
template< typename TMeasurement, typename TFrequencyContainer >
inline void
Histogram< TMeasurement, TFrequencyContainer >
::SetFrequency(const AbsoluteFrequencyType value)
{
typename Self::Iterator iter = this->Begin();
typename Self::Iterator end = this->End();
while ( iter != end )
{
iter.SetFrequency(value);
++iter;
}
}
template< typename TMeasurement, typename TFrequencyContainer >
inline bool
Histogram< TMeasurement, TFrequencyContainer >
::SetFrequencyOfIndex(const IndexType & index, const AbsoluteFrequencyType value)
{
return this->SetFrequency(this->GetInstanceIdentifier(index), value);
}
template< typename TMeasurement, typename TFrequencyContainer >
inline bool
Histogram< TMeasurement, TFrequencyContainer >
::SetFrequencyOfMeasurement(const MeasurementVectorType & measurement, const AbsoluteFrequencyType value)
{
IndexType index;
this->GetIndex( measurement, index );
return this->SetFrequencyOfIndex(index, value);
}
template< typename TMeasurement, typename TFrequencyContainer >
inline bool
Histogram< TMeasurement, TFrequencyContainer >
::IncreaseFrequencyOfIndex(const IndexType & index, const AbsoluteFrequencyType value)
{
const bool result =
this->IncreaseFrequency(this->GetInstanceIdentifier(index), value);
return result;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline bool
Histogram< TMeasurement, TFrequencyContainer >
::IncreaseFrequencyOfMeasurement(const MeasurementVectorType & measurement, const AbsoluteFrequencyType value)
{
IndexType index;
this->GetIndex(measurement, index);
return this->IncreaseFrequency(this->GetInstanceIdentifier(index), value);
}
template< typename TMeasurement, typename TFrequencyContainer >
inline typename Histogram< TMeasurement, TFrequencyContainer >::AbsoluteFrequencyType
Histogram< TMeasurement, TFrequencyContainer >
::GetFrequency(const IndexType & index) const
{
return ( this->GetFrequency( this->GetInstanceIdentifier(index) ) );
}
template< typename TMeasurement, typename TFrequencyContainer >
typename
Histogram< TMeasurement, TFrequencyContainer >::MeasurementType
Histogram< TMeasurement, TFrequencyContainer >
::GetMeasurement(InstanceIdentifier n, unsigned int dimension) const
{
return static_cast< MeasurementType >( ( m_Min[dimension][n]
+ m_Max[dimension][n] ) / 2 );
}
template< typename TMeasurement, typename TFrequencyContainer >
typename
Histogram< TMeasurement, TFrequencyContainer >::AbsoluteFrequencyType
Histogram< TMeasurement, TFrequencyContainer >
::GetFrequency(InstanceIdentifier n, unsigned int dimension) const
{
InstanceIdentifier nextOffset = this->m_OffsetTable[dimension + 1];
InstanceIdentifier current = this->m_OffsetTable[dimension] * n;
InstanceIdentifier includeLength = this->m_OffsetTable[dimension];
InstanceIdentifier include;
InstanceIdentifier includeEnd;
InstanceIdentifier last = this->m_OffsetTable[this->GetMeasurementVectorSize()];
AbsoluteFrequencyType frequency = 0;
while ( current < last )
{
include = current;
includeEnd = include + includeLength;
while ( include < includeEnd )
{
frequency += GetFrequency(include);
include++;
}
current += nextOffset;
}
return frequency;
}
template< typename TMeasurement, typename TFrequencyContainer >
inline typename Histogram< TMeasurement, TFrequencyContainer >::TotalAbsoluteFrequencyType
Histogram< TMeasurement, TFrequencyContainer >
::GetTotalFrequency() const
{
return m_FrequencyContainer->GetTotalFrequency();
}
template< typename TMeasurement, typename TFrequencyContainer >
double
Histogram< TMeasurement, TFrequencyContainer >
::Quantile(unsigned int dimension, double p) const
{
InstanceIdentifier n;
const unsigned int size = this->GetSize(dimension);
double p_n_prev;
double p_n;
double f_n;
double cumulated = 0;
double totalFrequency = double( this->GetTotalFrequency() );
double binProportion;
double min, max, interval;
if ( p < 0.5 )
{
n = 0;
p_n = NumericTraits< double >::Zero;
do
{
f_n = this->GetFrequency(n, dimension);
cumulated += f_n;
p_n_prev = p_n;
p_n = cumulated / totalFrequency;
n++;
}
while ( n < size && p_n < p );
binProportion = f_n / totalFrequency;
min = double( this->GetBinMin(dimension, n - 1) );
max = double( this->GetBinMax(dimension, n - 1) );
interval = max - min;
return min + ( ( p - p_n_prev ) / binProportion ) * interval;
}
else
{
n = size - 1;
InstanceIdentifier m = NumericTraits< InstanceIdentifier >::Zero;
p_n = NumericTraits< double >::One;
do
{
f_n = this->GetFrequency(n, dimension);
cumulated += f_n;
p_n_prev = p_n;
p_n = NumericTraits< double >::One - cumulated / totalFrequency;
n--;
m++;
}
while ( m< size && p_n > p );
binProportion = f_n / totalFrequency;
min = double( this->GetBinMin(dimension, n + 1) );
max = double( this->GetBinMax(dimension, n + 1) );
interval = max - min;
return max - ( ( p_n_prev - p ) / binProportion ) * interval;
}
}
template< typename TMeasurement, typename TFrequencyContainer >
double
Histogram< TMeasurement, TFrequencyContainer >
::Mean(unsigned int dimension) const
{
const unsigned int size = this->GetSize(dimension);
double totalFrequency = double( this->GetTotalFrequency() );
double sum = 0;
for( unsigned int i = 0; i<size; i++ )
{
sum += this->GetFrequency( i, dimension );
}
return sum / totalFrequency;
}
template< typename TMeasurement, typename TFrequencyContainer >
void
Histogram< TMeasurement, TFrequencyContainer >
::PrintSelf(std::ostream & os, Indent indent) const
{
Superclass::PrintSelf(os, indent);
// os << indent << "MeasurementVectorSize: " << this->GetMeasurementVectorSize() << std::endl;
os << indent << "TotalFrequency: " << this->GetTotalFrequency() << std::endl;
os << indent << "Size: ";
for ( unsigned int i = 0; i < m_Size.Size(); i++ )
{
os << m_Size[i] << " ";
}
os << std::endl;
os << indent << "Bin Minima: ";
for ( unsigned int i = 0; i < m_Min.size(); i++ )
{
os << m_Min[i][0] << " ";
}
os << std::endl;
os << indent << "Bin Maxima: ";
for ( unsigned int i = 0; i < m_Max.size(); i++ )
{
os << m_Max[i][m_Max[i].size()-1] << " ";
}
os << std::endl;
os << indent << "ClipBinsAtEnds: "
<< itk::NumericTraits< bool >::PrintType( this->GetClipBinsAtEnds() ) << std::endl;
os << indent << "OffsetTable: ";
for ( unsigned int i = 0; i < this->m_OffsetTable.size(); i++ )
{
os << this->m_OffsetTable[i] << " ";
}
os << std::endl;
os << indent << "FrequencyContainerPointer: " << std::endl;
m_FrequencyContainer->Print( os, indent.GetNextIndent() );
}
template< typename TMeasurement, typename TFrequencyContainer >
void
Histogram< TMeasurement, TFrequencyContainer >
::Graft(const DataObject *thatObject)
{
this->Superclass::Graft(thatObject);
const Self *thatConst = dynamic_cast< const Self * >( thatObject );
if ( thatConst )
{
Self *that = const_cast< Self * >( thatConst );
this->m_Size = that->m_Size;
this->m_OffsetTable = that->m_OffsetTable;
this->m_FrequencyContainer = that->m_FrequencyContainer;
this->m_NumberOfInstances = that->m_NumberOfInstances;
this->m_Min = that->m_Min;
this->m_Max = that->m_Max;
this->m_TempMeasurementVector = that->m_TempMeasurementVector;
this->m_TempIndex = that->m_TempIndex;
this->m_ClipBinsAtEnds = that->m_ClipBinsAtEnds;
}
}
#if !defined(ITK_LEGACY_REMOVE)
template< typename TMeasurement, typename TFrequencyContainer >
inline const typename Histogram< TMeasurement, TFrequencyContainer >::IndexType &
Histogram< TMeasurement, TFrequencyContainer >
::GetIndex(const MeasurementVectorType & measurement) const
{
// Have this deprecated method call the un-deprecated one..
this->GetIndex(measurement, m_TempIndex);
return m_TempIndex;
}
#endif
} // end of namespace Statistics
} // end of namespace itk
#endif
|