This file is indexed.

/usr/include/ITK-4.5/itkIPLFileNameList.h is in libinsighttoolkit4-dev 4.5.0-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
/*=========================================================================
 *
 *  Portions of this file are subject to the VTK Toolkit Version 3 copyright.
 *
 *  Copyright (c) Ken Martin, Will Schroeder, Bill Lorensen
 *
 *  For complete copyright, license and disclaimer of warranty information
 *  please refer to the NOTICE file at the top of the ITK source tree.
 *
 *=========================================================================*/
#ifndef __itkIPLFileNameList_h
#define __itkIPLFileNameList_h
#include "ITKIOIPLExport.h"

#include "itkMacro.h"
#include "itkObject.h"

#include <cstdio>
#include <string>
#include <list>
/** Set built-in type.  Creates member Set"name"() (e.g., SetVisibility()); */
#define IPLSetMacro(name, type)              \
  virtual void Set##name (const type _arg) \
    {                                        \
    if ( this->m_##name != _arg )          \
      {                                      \
      this->m_##name = _arg;               \
      }                                      \
    }

/** Get built-in type.  Creates member Get"name"() (e.g., GetVisibility()); */
#define IPLGetMacro(name, type) \
  virtual type Get##name ()   \
    {                           \
    return this->m_##name;    \
    }

namespace itk
{
/** \class IPLSortInfo
 *  \brief -- holds info on one file for IPLCommonImageIO
 * \ingroup ITKIOIPL
 */
class IPLFileSortInfo
{
public:
  IPLFileSortInfo()
  {
    m_SliceLocation = 0;
    m_SliceOffset = 0;
    m_EchoNumber = 0;
    m_ImageNumber = 0;
    m_Data = 0;
  }

  IPLFileSortInfo(const char *const filename, float sliceLocation,
                  int sliceOffset, int echoNumber, int imageNumber,
                  void *data = 0)
  {
    m_ImageFileName = filename;
    m_SliceLocation = sliceLocation;
    m_SliceOffset = sliceOffset;
    m_EchoNumber = echoNumber;
    m_ImageNumber = imageNumber;
    m_Data = data;
  }

  virtual ~IPLFileSortInfo() {}

  IPLSetMacro(ImageFileName, std::string);
  IPLGetMacro(ImageFileName, std::string);
  IPLSetMacro(SliceLocation, float);
  IPLGetMacro(SliceLocation, float);
  IPLSetMacro(SliceOffset, int);
  IPLGetMacro(SliceOffset, int);
  IPLSetMacro(EchoNumber, int);
  IPLGetMacro(EchoNumber, int);
  IPLSetMacro(ImageNumber, int);
  IPLGetMacro(ImageNumber, int);
  IPLSetMacro(Data, void *);
  IPLGetMacro(Data, const void *);

private:
  std::string m_ImageFileName;
  float       m_SliceLocation;
  int         m_SliceOffset;
  int         m_EchoNumber;
  int         m_ImageNumber;
  const void *m_Data;
};

/** \class IPLFileNameList
 *  \brief -- stores filename+info to be enumerated for IPLCommonImageIO
 * \ingroup ITKIOIPL
 */
class ITKIOIPL_EXPORT IPLFileNameList
{
public:
  typedef std::vector< IPLFileSortInfo * > ListType;
  typedef ListType::iterator               IteratorType;
  typedef size_t                           ListSizeType;

  enum {
    SortGlobalAscend = 0,
    SortGlobalDescend = 1,
    SortByNameAscend = 2,
    SortByNameDescend = 3
    };

  IPLFileNameList()
  {
    m_XDim = 0;
    m_YDim = 0;
    m_XRes = 0.0;
    m_YRes = 0.0;
    m_Key1 = 0;  /** Key that must be matched for image to be used,
                   i.e. seriesNumber, extensionkey */
    m_Key2 = 0;  /** Key that must be matched for image to be used, i.e.
                   echoNumber*/
    m_SortOrder = SortGlobalAscend;
  }

  virtual ~IPLFileNameList()
  {
    IteratorType it = begin();
    IteratorType itend = end();

    while ( it != itend )
      {
      delete ( *it );
      it++;
      }
  }

  IteratorType begin()
  {
    return m_List.begin();
  }

  IteratorType end()
  {
    return m_List.end();
  }

  IPLFileSortInfo * operator[](unsigned int __n)
  {
    IteratorType it = begin();
    IteratorType itend = end();

    for ( unsigned int i = 0; it != itend && i != __n; it++, i++ )
        {}
    if ( it == itend )
      {
      return 0;
      }
    return *it;
  }

  ListSizeType NumFiles() const
  {
    return m_List.size();
  }

  bool AddElementToList(char const *const filename,
                        const float sliceLocation,
                        const int offset,
                        const int XDim,
                        const int YDim,
                        const float XRes,
                        const float YRes,
                        const int imageNumber,
                        const int Key1,
                        const int Key2)
  {
    if ( m_List.empty() )
      {
      m_XDim = XDim;
      m_YDim = YDim;
      m_XRes = XRes;
      m_YRes = YRes;
      m_Key1 = Key1;
      m_Key2 = Key2;
      }
    else if ( XDim != m_XDim || YDim != m_YDim )
      {
      return false;
      }
    else if(XRes != m_XRes || YRes != m_YRes)
      {
      return false;
      }
    else if ( Key1 != m_Key1 || Key2 != m_Key2 )
      {
      return true;
      }
    IteratorType it = begin();
    IteratorType itend = end();
    while ( it != itend )
      {
      if ( std::string(filename) == ( *it )->GetImageFileName() )
        {
        return true;
        }
      it++;
      }
    m_List.push_back( new IPLFileSortInfo(filename,
                                          sliceLocation,
                                          offset,
                                          0, // echo number
                                          imageNumber) );
    return true;
  }

  void RemoveElementFromList(const int ElementToRemove)
  {
    IteratorType it = m_List.begin();
    IteratorType itend = m_List.end();
    int          i = 0;

    for ( i = 0; it != itend; i++, it++ )
      {
      if ( i != ElementToRemove )
        {
        break;
        }
      }
    if ( it == itend )
      {
      return;
      }
    m_List.erase(it);
  }

  void sortImageList();

  void sortImageListAscend();

  void sortImageListDescend();

  ListSizeType GetnumImageInfoStructs() const
  {
    return m_List.size();
  }

  IPLSetMacro(XDim, int);
  IPLGetMacro(XDim, int);
  IPLSetMacro(YDim, int);
  IPLGetMacro(YDim, int);
  IPLSetMacro(XRes, float);
  IPLGetMacro(XRes, float);
  IPLSetMacro(YRes, float);
  IPLGetMacro(YRes, float);
  IPLSetMacro(Key1, int);
  IPLGetMacro(Key1, int);
  IPLSetMacro(Key2, int);
  IPLGetMacro(Key2, int);
  IPLSetMacro(SortOrder, int);

private:
  ListType m_List;
  int      m_XDim;
  int      m_YDim;
  float    m_XRes;
  float    m_YRes;
  int      m_Key1; /** Key that must be matched for image to be used,
                     i.e. seriesNumber, extensionkey */
  int m_Key2;      /** Key that must be matched for image to be used,
                     i.e. echoNumber */
  int m_SortOrder;
};
}
#endif                          /* __itkIPLFileNameList_h */