This file is indexed.

/usr/include/ITK-4.5/itkIndex.h is in libinsighttoolkit4-dev 4.5.0-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef __itkIndex_h
#define __itkIndex_h

#include "itkOffset.h"
#include "itkFixedArray.h"
#include "itkMath.h"

#include <memory>

namespace itk
{
namespace Functor
{
template< unsigned int VIndexDimension >
class IndexLexicographicCompare;
}

/** \class Index
 * \brief Represent a n-dimensional index in a n-dimensional image.
 *
 * Index is a templated class to represent a multi-dimensional index,
 * i.e. (i,j,k,...). Index is templated over the dimension of the index.
 * ITK assumes the first element of an index is the fastest moving index.
 *
 * For efficiency sake, Index does not define a default constructor, a
 * copy constructor, or an operator=. We rely on the compiler to provide
 * efficient bitwise copies.
 *
 * Index is an "aggregate" class.  Its data is public (m_Index)
 * allowing for fast and convenient instantiations/assignments.
 *
 * The following syntax for assigning an index is allowed/suggested:
 *
 *    Index<3> index = {{5, 2, 7}};
 *
 * The double braces {{ and }} are needed to prevent a compiler warning
 * about a partly bracketed initializer.
 *
 * \remark
 * Should there be an itkBoundedIndex to handle bounds checking? Or should
 * there be an API to perform bounded increments in the iterator.
 *
 * \ingroup ImageAccess
 * \ingroup ImageObjects
 * \ingroup ITKCommon
 *
 * \wiki
 * \wikiexample{SimpleOperations/DistanceBetweenIndices,Distance between two indices}
 * \wikiexample{Images/Index,An object which holds the index of a pixel}
 * \endwiki
 */

template< unsigned int VIndexDimension = 2 >
class Index
{
public:
  /** Standard class typedefs. */
  typedef Index Self;

  /** Compatible Index and value typedef */
  typedef   Index< VIndexDimension > IndexType;
  typedef   ::itk::IndexValueType    IndexValueType;

  /** Dimension constant */
  itkStaticConstMacro(Dimension, unsigned int, VIndexDimension);

  /** Get the dimension (size) of the index. */
  static unsigned int GetIndexDimension() { return VIndexDimension; }

  /** Compatible Size typedef. */
  typedef   Size< VIndexDimension > SizeType;

  /** Compatible Offset and Offset value typedef. */
  typedef   Offset< VIndexDimension >            OffsetType;
  typedef   ::itk::OffsetValueType               OffsetValueType;

  /** Lexicographic ordering functor type.  */
  typedef Functor::IndexLexicographicCompare< VIndexDimension > LexicographicCompare;

  /** Add a size to an index. This method models a random access Index. */
  const Self
  operator+(const SizeType & size) const
  {
    Self result;

    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { result[i] = m_Index[i] + static_cast< IndexValueType >( size[i] ); }
    return result;
  }

  /** Increment index by a size. This method models a random access Index. */
  const Self &
  operator+=(const SizeType & size)
  {
    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { m_Index[i] += static_cast< IndexValueType >( size[i] ); }
    return *this;
  }

  /** Subtract a size from an index. This method models a random access Index.
    */
  const Self
  operator-(const SizeType & size) const
  {
    Self result;

    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { result[i] = m_Index[i] - static_cast< IndexValueType >( size[i] ); }
    return result;
  }

  /** Decrement index by a size. This method models a random access Index. */
  const Self &
  operator-=(const SizeType & size)
  {
    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { m_Index[i] -= static_cast< IndexValueType >( size[i] ); }
    return *this;
  }

  /** Add an offset to an index. */
  const Self
  operator+(const OffsetType & offset) const
  {
    Self result;

    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { result[i] = m_Index[i] + offset[i]; }
    return result;
  }

  /** Increment index by an offset. This method models a random access Index. */
  const Self &
  operator+=(const OffsetType & offset)
  {
    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { m_Index[i] += offset[i]; }
    return *this;
  }

  /** Decrement index by an offset. This method models a random access Index. */
  const Self &
  operator-=(const OffsetType & offset)
  {
    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { m_Index[i] -= offset[i]; }
    return *this;
  }

  /** Subtract an offset from an index. */
  const Self
  operator-(const OffsetType & off) const
  {
    Self result;

    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { result[i] = m_Index[i] - off.m_Offset[i]; }
    return result;
  }

  /** Subtract two indices. This method models a random access Index. */
  const OffsetType
  operator-(const Self & vec) const
  {
    OffsetType result;

    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { result[i] = m_Index[i] - vec.m_Index[i]; }
    return result;
  }

  /** Multiply an index by a size (elementwise product). This method
   * models a random access Index.  */
  const Self
  operator*(const SizeType & vec) const
  {
    Self result;

    for ( unsigned int i = 0; i < VIndexDimension; i++ )
                { result[i] = m_Index[i] * static_cast< IndexValueType >( vec.m_Size[i] ); }
    return result;
  }

  /** Compare two indices. */
  bool
  operator==(const Self & vec) const
  {
    bool same = true;

    for ( unsigned int i = 0; i < VIndexDimension && same; i++ )
                { same = ( m_Index[i] == vec.m_Index[i] ); }
    return same;
  }

  /** Compare two indices. */
  bool
  operator!=(const Self & vec) const
  {
    bool same = true;

    for ( unsigned int i = 0; i < VIndexDimension && same; i++ )
                { same = ( m_Index[i] == vec.m_Index[i] ); }
    return !same;
  }

  /** Access an element of the index. Elements are numbered
   * 0, ..., VIndexDimension-1. No bounds checking is performed. */
  IndexValueType & operator[](unsigned int dim)
  { return m_Index[dim]; }

  /** Access an element of the index. Elements are numbered
   * 0, ..., VIndexDimension-1. This version can only be an rvalue.
   * No bounds checking is performed. */
  IndexValueType operator[](unsigned int dim) const
  { return m_Index[dim]; }

  /** Get the index. This provides a read only reference to the index.
   * \sa SetIndex() */
  const IndexValueType * GetIndex() const { return m_Index; }

  /** Set the index.
   * Try to prototype this function so that val has to point to a block of
   * memory that is the appropriate size.
   * \sa GetIndex() */
  void SetIndex(const IndexValueType val[VIndexDimension])
  {
    std::copy(val,
              val+VIndexDimension,
              m_Index);
  }

  /** Sets the value of one of the elements in the index.
   * This method is mainly intended to facilitate the access to elements
   * from Tcl and Python where C++ notation is not very convenient.
   * \warning No bound checking is performed
   * \sa SetIndex()
   * \sa GetElement() */
  void SetElement(unsigned long element, IndexValueType val)
  { m_Index[element] = val;  }

  /** Gets the value of one of the elements in the index.
   * This method is mainly intended to facilitate the access to elements
   * from Tcl and Python where C++ notation is not very convenient.
   * \warning No bound checking is performed
   * \sa GetIndex()
   * \sa SetElement() */
  IndexValueType GetElement(unsigned long element) const
  { return m_Index[element]; }

  /** Return a basis vector of the form [0, ..., 0, 1, 0, ... 0] where the "1"
   * is positioned in the location specified by the parameter "dim". Valid
   * values of "dim" are 0, ..., VIndexDimension-1. */
  static Self GetBasisIndex(unsigned int dim);

  /** Set one value for the index in all dimensions.  Useful for initializing
   * an offset to zero. */
  void Fill(IndexValueType value)
  { for ( unsigned int i = 0; i < VIndexDimension; ++i ) { m_Index[i] = value; } }

  /** Index is an "aggregate" class.  Its data is public (m_Index)
   * allowing for fast and convenient instantiations/assignments.
   *
   * The following syntax for assigning an index is allowed/suggested:
   *    Index<3> index = {5, 2, 7}; */
  IndexValueType m_Index[VIndexDimension];

  /** Copy values from a FixedArray by rounding each one of the components */
  template< typename TCoordRep >
  inline void CopyWithRound(const FixedArray< TCoordRep, VIndexDimension > & point)
  {
    itkForLoopRoundingAndAssignmentMacro(IndexType,
                                         ContinuousIndexType,
                                         IndexValueType,
                                         m_Index,
                                         point,
                                         VIndexDimension);
    /* NON TEMPLATE_META_PROGRAMMING_LOOP_UNROLLING data version
     * Leaving here for documentation purposes
     * for ( unsigned int i = 0; i < VIndexDimension; ++i )
     *   {
     *   m_Index[i] = Math::Round< IndexValueType >(point[i]);
     *   }
     */
  }

  /** Copy values from a FixedArray by casting each one of the components */
  template< typename TCoordRep >
  inline void CopyWithCast(const FixedArray< TCoordRep, VIndexDimension > & point)
  {
    for ( unsigned int i = 0; i < VIndexDimension; ++i )
      {
      m_Index[i] = static_cast< IndexValueType >( point[i] );
      }
  }

// force gccxml to find the constructors found before the internal upgrade to
// gcc 4.2
#if defined( CABLE_CONFIGURATION )
  Index();                      //purposely not implemented
  Index(const Self &);          //purposely not implemented
  void operator=(const Self &); //purposely not implemented

#endif
};

namespace Functor
{
/** \class IndexLexicographicCompare
 * \brief Order Index instances lexicographically.
 *
 * This is a comparison functor suitable for storing Index instances
 * in an STL container.  The ordering is total and unique but has
 * little geometric meaning.
 * \ingroup ITKCommon
 */
template< unsigned int VIndexDimension >
class IndexLexicographicCompare
{
public:
  bool operator()(Index< VIndexDimension > const & l,
                  Index< VIndexDimension > const & r) const
  {
    for ( unsigned int i = 0; i < VIndexDimension; ++i )
      {
      if ( l.m_Index[i] < r.m_Index[i] )
        {
        return true;
        }
      else if ( l.m_Index[i] > r.m_Index[i] )
        {
        return false;
        }
      }
    return false;
  }
};
}

template< unsigned int VIndexDimension >
Index< VIndexDimension >
Index< VIndexDimension >
::GetBasisIndex(unsigned int dim)
{
  Self ind;

  memset(ind.m_Index, 0, sizeof( IndexValueType ) * VIndexDimension);
  ind.m_Index[dim] = 1;
  return ind;
}

template< unsigned int VIndexDimension >
std::ostream & operator<<(std::ostream & os, const Index< VIndexDimension > & ind)
{
  os << "[";
  for ( unsigned int i = 0; i + 1 < VIndexDimension; ++i )
    {
    os << ind[i] << ", ";
    }
  if ( VIndexDimension >= 1 )
    {
    os << ind[VIndexDimension - 1];
    }
  os << "]";
  return os;
}
} // end namespace itk

#endif