This file is indexed.

/usr/include/ITK-4.5/itkMetaSceneConverter.h is in libinsighttoolkit4-dev 4.5.0-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef __itkMetaSceneConverter_h
#define __itkMetaSceneConverter_h

#include "metaScene.h"
#include "itkMetaEvent.h"
#include "itkSceneSpatialObject.h"
#include "itkDefaultStaticMeshTraits.h"
#include "itkMetaConverterBase.h"
#include <string>
#include <map>

namespace itk
{
/** \class MetaSceneConverter
 *  \brief Converts between MetaObject and SpaitalObject scenes.
 *
 *  SpatialObject hierarchies are written to disk using the MetaIO
 *  library. This class is responsible for converting between MetaIO
 *  scenes and SpatialObject scenes
 *
 *  \sa MetaConverterBase
 *  \ingroup ITKSpatialObjects
 */
template< unsigned int NDimensions,
          typename PixelType = unsigned char,
          typename TMeshTraits =
            DefaultStaticMeshTraits< PixelType, NDimensions, NDimensions >
          >
class MetaSceneConverter
{
public:

  /** SpatialObject Scene types */
  typedef itk::SceneSpatialObject< NDimensions > SceneType;
  typedef typename  SceneType::Pointer           ScenePointer;

  /** Typedef for auxiliary conversion classes */
  typedef MetaConverterBase< NDimensions >              MetaConverterBaseType;
  typedef typename MetaConverterBaseType::Pointer       MetaConverterPointer;
  typedef std::map< std::string, MetaConverterPointer > ConverterMapType;

  MetaSceneConverter();
  ~MetaSceneConverter();

  itkStaticConstMacro(MaximumDepth, unsigned int, 9999999);

  /** Read a MetaFile and create a Scene SpatialObject */
  ScenePointer ReadMeta(const char *name);

  /** write out a Scene SpatialObject */
  bool WriteMeta(SceneType *scene, const char *fileName,
                 unsigned int depth = MaximumDepth,
                 char *spatialObjectTypeName = NULL);

  const MetaEvent * GetEvent() const { return m_Event; }
  void  SetEvent(MetaEvent *event) { m_Event = event; }

  /** Set if the points should be saved in binary/ASCII */
  void SetBinaryPoints(bool binary) { m_BinaryPoints = binary; }

  /** set/get the precision for writing out numbers as plain text */
  void SetTransformPrecision(unsigned int precision)
  {
    m_TransformPrecision = precision;
  }
  unsigned int GetTransformPrecision(){ return m_TransformPrecision; }

  /** Set if the images should be written in different files */
  void SetWriteImagesInSeparateFile(bool separate)
  {
    m_WriteImagesInSeparateFile = separate;
  }
  /** add new SpatialObject/MetaObject converters at runtime
   *
   *  Every Converter is mapped to both a metaObject type name
   * and a spatialObject type name -- these need to match what
   * gets read from & written to the MetaIO file
   */
  void RegisterMetaConverter(const char *metaTypeName,
                             const char *spatialObjectTypeName,
                             MetaConverterBaseType *converter);

  MetaScene * CreateMetaScene(SceneType *scene,
                              unsigned int depth = MaximumDepth,
                              char *name = NULL);

  ScenePointer CreateSpatialObjectScene(MetaScene *scene);

private:

  typedef itk::SpatialObject< NDimensions >         SpatialObjectType;
  typedef typename SpatialObjectType::Pointer       SpatialObjectPointer;
  typedef typename SpatialObjectType::TransformType TransformType;

  typedef std::list< MetaObject * > MetaObjectListType;

  template <typename TConverter>
    MetaObject *SpatialObjectToMetaObject(SpatialObjectPointer &so)
  {
    typename TConverter::Pointer converter = TConverter::New();
    // needed just for Image & ImageMask
    converter->SetWriteImagesInSeparateFile(this->m_WriteImagesInSeparateFile);
    return converter->SpatialObjectToMetaObject(so.GetPointer());
  }
  template <typename TConverter>
    SpatialObjectPointer MetaObjectToSpatialObject(const MetaObject *mo)
  {
    typename TConverter::Pointer converter = TConverter::New();
    return converter->MetaObjectToSpatialObject(mo);
  }
  void SetTransform(MetaObject *obj, TransformType *transform);

  void SetTransform(SpatialObjectType *so, MetaObject *obj);

  double m_Orientation[100];
  double m_Position[10];
  double m_CenterOfRotation[10];

  MetaEvent *      m_Event;
  bool             m_BinaryPoints;
  bool             m_WriteImagesInSeparateFile;
  unsigned int     m_TransformPrecision;
  ConverterMapType m_ConverterMap;
};
} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkMetaSceneConverter.hxx"
#endif

#endif