/usr/include/ITK-4.5/itkPDEDeformableRegistrationFunction.h is in libinsighttoolkit4-dev 4.5.0-3.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 | /*=========================================================================
*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef __itkPDEDeformableRegistrationFunction_h
#define __itkPDEDeformableRegistrationFunction_h
#include "itkFiniteDifferenceFunction.h"
namespace itk
{
/** \class PDEDeformableRegistrationFunction
*
* This is an abstract base class for all PDE functions which drives a
* deformable registration algorithm. It is used by
* PDEDeformationRegistrationFilter subclasses to compute the
* output deformation field which will map a moving image onto
* a fixed image.
*
* This class is templated over the fixed image type, moving image type
* and the deformation field type.
*
* \sa PDEDeformableRegistrationFilter
* \ingroup FiniteDifferenceFunctions
* \ingroup ITKRegistrationCommon
*/
template< typename TFixedImage, typename TMovingImage, typename TDisplacementField >
class PDEDeformableRegistrationFunction:
public FiniteDifferenceFunction< TDisplacementField >
{
public:
/** Standard class typedefs. */
typedef PDEDeformableRegistrationFunction Self;
typedef FiniteDifferenceFunction< TDisplacementField > Superclass;
typedef SmartPointer< Self > Pointer;
typedef SmartPointer< const Self > ConstPointer;
/** Run-time type information (and related methods) */
itkTypeMacro(PDEDeformableRegistrationFunction,
FiniteDifferenceFunction);
/** MovingImage image type. */
typedef TMovingImage MovingImageType;
typedef typename MovingImageType::ConstPointer MovingImagePointer;
/** FixedImage image type. */
typedef TFixedImage FixedImageType;
typedef typename FixedImageType::ConstPointer FixedImagePointer;
/** Deformation field type. */
typedef TDisplacementField DisplacementFieldType;
typedef typename DisplacementFieldType::Pointer DisplacementFieldTypePointer;
#ifdef ITKV3_COMPATIBILITY
typedef TDisplacementField DeformationFieldType;
typedef typename DeformationFieldType::Pointer DeformationFieldTypePointer;
#endif
/** Set the moving image. */
void SetMovingImage(const MovingImageType *ptr)
{ m_MovingImage = ptr; }
/** Get the moving image. */
const MovingImageType * GetMovingImage(void) const
{ return m_MovingImage; }
/** Set the fixed image. */
void SetFixedImage(const FixedImageType *ptr)
{ m_FixedImage = ptr; }
/** Get the fixed image. */
const FixedImageType * GetFixedImage(void) const
{ return m_FixedImage; }
/** Set the deformation field image. */
void SetDisplacementField(DisplacementFieldTypePointer ptr)
{ m_DisplacementField = ptr; }
/** Get the deformation field. This function should have been
* declared const. It is not for backward compatibility reasons. */
DisplacementFieldType * GetDisplacementField(void)
{ return m_DisplacementField; }
#ifdef ITKV3_COMPATIBILITY
void SetDeformationField(DeformationFieldTypePointer ptr)
{ this->SetDisplacementField(ptr); }
DeformationFieldType * GetDeformationField(void)
{ return itkDynamicCastInDebugMode<DeformationFieldType *> (this->GetDisplacementField()); }
#endif
void SetEnergy(double e) { m_Energy = e; }
double GetEnergy() const { return m_Energy; }
void SetGradientStep(double e) { m_GradientStep = e; }
double GetGradientStep() const { return m_GradientStep; }
void SetNormalizeGradient(bool e) { m_NormalizeGradient = e; }
bool GetNormalizeGradient() const { return m_NormalizeGradient; }
protected:
PDEDeformableRegistrationFunction()
{
m_MovingImage = NULL;
m_FixedImage = NULL;
m_DisplacementField = NULL;
m_Energy = 0.0;
m_NormalizeGradient = true;
m_GradientStep = 1.0;
}
~PDEDeformableRegistrationFunction() {}
void PrintSelf(std::ostream & os, Indent indent) const
{
Superclass::PrintSelf(os, indent);
os << indent << "MovingImage: ";
os << m_MovingImage.GetPointer() << std::endl;
os << indent << "FixedImage: ";
os << m_FixedImage.GetPointer() << std::endl;
}
/** The moving image. */
MovingImagePointer m_MovingImage;
/** The fixed image. */
FixedImagePointer m_FixedImage;
/** The deformation field. */
DisplacementFieldTypePointer m_DisplacementField;
mutable double m_Energy;
bool m_NormalizeGradient;
mutable double m_GradientStep;
private:
PDEDeformableRegistrationFunction(const Self &); //purposely not implemented
void operator=(const Self &); //purposely not implemented
};
} // end namespace itk
#endif
|