/usr/include/ncbi/cdd.h is in libncbi6-dev 6.1.20120620-7.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 | /***********************************************************************
*
**
* Automatic header module from ASNTOOL
*
************************************************************************/
#ifndef _ASNTOOL_
#include <asn.h>
#endif
static char * asnfilename = "cdd.h24";
static AsnValxNode avnx[94] = {
{20,"unassigned" ,0,0.0,&avnx[1] } ,
{20,"finished-ok" ,1,0.0,&avnx[2] } ,
{20,"pending-release" ,2,0.0,&avnx[3] } ,
{20,"other-asis" ,3,0.0,&avnx[4] } ,
{20,"matrix-only" ,4,0.0,&avnx[5] } ,
{20,"update-running" ,5,0.0,&avnx[6] } ,
{20,"auto-updated" ,6,0.0,&avnx[7] } ,
{20,"claimed" ,7,0.0,&avnx[8] } ,
{20,"curated-complete" ,8,0.0,&avnx[9] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[11] } ,
{20,"prein" ,1,0.0,&avnx[12] } ,
{20,"ofc" ,2,0.0,&avnx[13] } ,
{20,"iac" ,3,0.0,&avnx[14] } ,
{20,"ofv1" ,4,0.0,&avnx[15] } ,
{20,"iav1" ,5,0.0,&avnx[16] } ,
{20,"ofv2" ,6,0.0,&avnx[17] } ,
{20,"iav2" ,7,0.0,&avnx[18] } ,
{20,"postin" ,8,0.0,&avnx[19] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[21] } ,
{20,"readonly" ,1,0.0,&avnx[22] } ,
{20,"readwrite" ,2,0.0,&avnx[23] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[25] } ,
{20,"section" ,1,0.0,&avnx[26] } ,
{20,"figgrp" ,2,0.0,&avnx[27] } ,
{20,"table" ,3,0.0,&avnx[28] } ,
{20,"chapter" ,4,0.0,&avnx[29] } ,
{20,"biblist" ,5,0.0,&avnx[30] } ,
{20,"box" ,6,0.0,&avnx[31] } ,
{20,"glossary" ,7,0.0,&avnx[32] } ,
{20,"appendix" ,8,0.0,&avnx[33] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[35] } ,
{20,"update" ,1,0.0,&avnx[36] } ,
{20,"update-3d" ,2,0.0,&avnx[37] } ,
{20,"demoted" ,51,0.0,&avnx[38] } ,
{20,"demoted-3d" ,52,0.0,&avnx[39] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"classical" ,0,0.0,&avnx[41] } ,
{20,"fusion" ,1,0.0,&avnx[42] } ,
{20,"deletion" ,2,0.0,&avnx[43] } ,
{20,"permutation" ,3,0.0,&avnx[44] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[46] } ,
{20,"percent-id" ,1,0.0,&avnx[47] } ,
{20,"kimura-corrected" ,2,0.0,&avnx[48] } ,
{20,"aligned-score" ,3,0.0,&avnx[49] } ,
{20,"aligned-score-ext" ,4,0.0,&avnx[50] } ,
{20,"aligned-score-filled" ,5,0.0,&avnx[51] } ,
{20,"blast-footprint" ,6,0.0,&avnx[52] } ,
{20,"blast-full" ,7,0.0,&avnx[53] } ,
{20,"hybrid-aligned-score" ,8,0.0,&avnx[54] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[56] } ,
{20,"single-linkage" ,1,0.0,&avnx[57] } ,
{20,"neighbor-joining" ,2,0.0,&avnx[58] } ,
{20,"fast-minimum-evolution" ,3,0.0,&avnx[59] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[61] } ,
{20,"blosum45" ,1,0.0,&avnx[62] } ,
{20,"blosum62" ,2,0.0,&avnx[63] } ,
{20,"blosum80" ,3,0.0,&avnx[64] } ,
{20,"pam30" ,4,0.0,&avnx[65] } ,
{20,"pam70" ,5,0.0,&avnx[66] } ,
{20,"pam250" ,6,0.0,&avnx[67] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"allDescendants" ,0,0.0,&avnx[69] } ,
{20,"immediateChildrenOnly" ,1,0.0,&avnx[70] } ,
{20,"selfOnly" ,2,0.0,&avnx[71] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"allDescendants" ,0,0.0,&avnx[73] } ,
{20,"immediateChildrenOnly" ,1,0.0,&avnx[74] } ,
{20,"other" ,255,0.0,NULL } ,
{2,NULL,0,0.0,NULL } ,
{2,NULL,0,0.0,NULL } ,
{2,NULL,1,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[79] } ,
{20,"cd-info" ,1,0.0,&avnx[80] } ,
{20,"align-annot" ,2,0.0,&avnx[81] } ,
{20,"seq-list" ,3,0.0,&avnx[82] } ,
{20,"seq-tree" ,4,0.0,&avnx[83] } ,
{20,"merge-preview" ,5,0.0,&avnx[84] } ,
{20,"cross-hits" ,6,0.0,&avnx[85] } ,
{20,"notes" ,7,0.0,&avnx[86] } ,
{20,"tax-tree" ,8,0.0,&avnx[87] } ,
{20,"dart" ,9,0.0,&avnx[88] } ,
{20,"dart-selected-rows" ,10,0.0,&avnx[89] } ,
{20,"other" ,255,0.0,NULL } ,
{20,"unassigned" ,0,0.0,&avnx[91] } ,
{20,"user-recorded" ,1,0.0,&avnx[92] } ,
{20,"server-generated" ,2,0.0,&avnx[93] } ,
{20,"other" ,255,0.0,NULL } };
static AsnType atx[227] = {
{401, "Cdd-id" ,1,0,0,0,0,1,0,0,NULL,&atx[11],&atx[1],0,&atx[12]} ,
{0, "uid" ,128,0,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[3]} ,
{302, "INTEGER" ,0,2,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{0, "gid" ,128,1,0,0,0,0,0,0,NULL,&atx[4],NULL,0,NULL} ,
{428, "Global-id" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[5],0,&atx[38]} ,
{0, "accession" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[7]} ,
{323, "VisibleString" ,0,26,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{0, "release" ,128,1,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[8]} ,
{0, "version" ,128,2,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[9]} ,
{0, "database" ,128,3,0,1,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{311, "SEQUENCE" ,0,16,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{315, "CHOICE" ,0,-1,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{402, "Cdd-id-set" ,1,0,0,0,0,1,0,0,NULL,&atx[14],&atx[13],0,&atx[15]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[0],NULL,0,NULL} ,
{312, "SEQUENCE OF" ,0,16,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{403, "Cdd" ,1,0,0,0,0,1,0,0,NULL,&atx[10],&atx[16],0,&atx[174]} ,
{0, "name" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[17]} ,
{0, "id" ,128,1,0,0,0,0,0,0,NULL,&atx[12],NULL,0,&atx[18]} ,
{0, "description" ,128,2,0,1,0,0,0,0,NULL,&atx[19],NULL,0,&atx[58]} ,
{432, "Cdd-descr-set" ,1,0,0,0,0,0,0,0,NULL,&atx[57],&atx[20],0,&atx[70]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[21],NULL,0,NULL} ,
{431, "Cdd-descr" ,1,0,0,0,0,0,0,0,NULL,&atx[11],&atx[22],0,&atx[19]} ,
{0, "othername" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[23]} ,
{0, "category" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[24]} ,
{0, "comment" ,128,2,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[25]} ,
{0, "reference" ,128,3,0,0,0,0,0,0,NULL,&atx[26],NULL,0,&atx[27]} ,
{410, "Pub" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[62]} ,
{0, "create-date" ,128,4,0,0,0,0,0,0,NULL,&atx[28],NULL,0,&atx[29]} ,
{409, "Date" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[26]} ,
{0, "tax-source" ,128,5,0,0,0,0,0,0,NULL,&atx[30],NULL,0,&atx[31]} ,
{415, "Org-ref" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[110]} ,
{0, "source" ,128,6,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[32]} ,
{0, "status" ,128,7,0,0,0,0,0,0,NULL,&atx[2],&avnx[0],0,&atx[33]} ,
{0, "update-date" ,128,8,0,0,0,0,0,0,NULL,&atx[28],NULL,0,&atx[34]} ,
{0, "scrapbook" ,128,9,0,0,0,0,0,0,NULL,&atx[14],&atx[35],0,&atx[36]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{0, "source-id" ,128,10,0,0,0,0,0,0,NULL,&atx[12],NULL,0,&atx[37]} ,
{0, "repeats" ,128,11,0,0,0,0,0,0,NULL,&atx[38],NULL,0,&atx[43]} ,
{429, "Cdd-repeat" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[39],0,&atx[47]} ,
{0, "count" ,128,0,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[40]} ,
{0, "location" ,128,1,0,1,0,0,0,0,NULL,&atx[41],NULL,0,&atx[42]} ,
{418, "Seq-loc" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[126]} ,
{0, "avglen" ,128,2,0,1,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
{0, "old-root" ,128,12,0,0,0,0,0,0,NULL,&atx[12],NULL,0,&atx[44]} ,
{0, "curation-status" ,128,13,0,0,0,0,0,0,NULL,&atx[2],&avnx[10],0,&atx[45]} ,
{0, "readonly-status" ,128,14,0,0,0,0,0,0,NULL,&atx[2],&avnx[20],0,&atx[46]} ,
{0, "book-ref" ,128,15,0,0,0,0,0,0,NULL,&atx[47],NULL,0,&atx[55]} ,
{430, "Cdd-book-ref" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[48],0,&atx[21]} ,
{0, "bookname" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[49]} ,
{0, "textelement" ,128,1,0,0,0,0,0,0,NULL,&atx[50],&avnx[24],0,&atx[51]} ,
{310, "ENUMERATED" ,0,10,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{0, "elementid" ,128,2,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[52]} ,
{0, "subelementid" ,128,3,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[53]} ,
{0, "celementid" ,128,4,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[54]} ,
{0, "csubelementid" ,128,5,0,1,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{0, "attribution" ,128,16,0,0,0,0,0,0,NULL,&atx[26],NULL,0,&atx[56]} ,
{0, "title" ,128,17,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{314, "SET OF" ,0,17,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{0, "seqannot" ,128,3,0,1,0,0,0,0,NULL,&atx[14],&atx[59],0,&atx[61]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[60],NULL,0,NULL} ,
{413, "Seq-annot" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[64]} ,
{0, "features" ,128,4,0,1,0,0,0,0,NULL,&atx[62],NULL,0,&atx[63]} ,
{411, "Biostruc-annot-set" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[68]} ,
{0, "sequences" ,128,5,0,1,0,0,0,0,NULL,&atx[64],NULL,0,&atx[65]} ,
{414, "Seq-entry" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[30]} ,
{0, "profile-range" ,128,6,0,1,0,0,0,0,NULL,&atx[66],NULL,0,&atx[67]} ,
{417, "Seq-interval" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[41]} ,
{0, "trunc-master" ,128,7,0,1,0,0,0,0,NULL,&atx[68],NULL,0,&atx[69]} ,
{412, "Bioseq" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[60]} ,
{0, "posfreq" ,128,8,0,1,0,0,0,0,NULL,&atx[70],NULL,0,&atx[78]} ,
{433, "Matrix" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[71],0,&atx[80]} ,
{0, "ncolumns" ,128,0,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[72]} ,
{0, "nrows" ,128,1,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[73]} ,
{0, "row-labels" ,128,2,0,1,0,0,0,0,NULL,&atx[14],&atx[74],0,&atx[75]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{0, "scale-factor" ,128,3,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[76]} ,
{0, "columns" ,128,4,0,0,0,0,0,0,NULL,&atx[14],&atx[77],0,NULL} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
{0, "scoremat" ,128,9,0,1,0,0,0,0,NULL,&atx[70],NULL,0,&atx[79]} ,
{0, "distance" ,128,10,0,1,0,0,0,0,NULL,&atx[80],NULL,0,&atx[86]} ,
{434, "Triangle" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[81],0,&atx[95]} ,
{0, "nelements" ,128,0,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[82]} ,
{0, "scores" ,128,1,0,1,0,0,0,0,NULL,&atx[83],NULL,0,&atx[84]} ,
{420, "Score-set" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[130]} ,
{0, "div-ranks" ,128,2,0,1,0,0,0,0,NULL,&atx[14],&atx[85],0,NULL} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
{0, "parent" ,128,11,0,1,0,0,0,0,NULL,&atx[0],NULL,0,&atx[87]} ,
{0, "children" ,128,12,0,1,0,0,0,0,NULL,&atx[12],NULL,0,&atx[88]} ,
{0, "siblings" ,128,13,0,1,0,0,0,0,NULL,&atx[12],NULL,0,&atx[89]} ,
{0, "neighbors" ,128,14,0,1,0,0,0,0,NULL,&atx[12],NULL,0,&atx[90]} ,
{0, "pending" ,128,15,0,1,0,0,0,0,NULL,&atx[14],&atx[91],0,&atx[103]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[92],NULL,0,NULL} ,
{436, "Update-align" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[93],0,&atx[105]} ,
{0, "description" ,128,0,0,1,0,0,0,0,NULL,&atx[14],&atx[94],0,&atx[101]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[95],NULL,0,NULL} ,
{435, "Update-comment" ,1,0,0,0,0,0,0,0,NULL,&atx[11],&atx[96],0,&atx[92]} ,
{0, "comment" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[97]} ,
{0, "addthis" ,128,1,0,0,0,0,0,0,NULL,&atx[41],NULL,0,&atx[98]} ,
{0, "replaces" ,128,2,0,0,0,0,0,0,NULL,&atx[41],NULL,0,&atx[99]} ,
{0, "reject-loc" ,128,3,0,0,0,0,0,0,NULL,&atx[41],NULL,0,&atx[100]} ,
{0, "reference" ,128,4,0,0,0,0,0,0,NULL,&atx[26],NULL,0,NULL} ,
{0, "seqannot" ,128,1,0,1,0,0,0,0,NULL,&atx[60],NULL,0,&atx[102]} ,
{0, "type" ,128,2,0,0,0,0,0,0,NULL,&atx[2],&avnx[34],0,NULL} ,
{0, "rejects" ,128,16,0,1,0,0,0,0,NULL,&atx[14],&atx[104],0,&atx[111]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[105],NULL,0,NULL} ,
{437, "Reject-id" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[106],0,&atx[121]} ,
{0, "description" ,128,0,0,1,0,0,0,0,NULL,&atx[14],&atx[107],0,&atx[108]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[95],NULL,0,NULL} ,
{0, "ids" ,128,1,0,0,0,0,0,0,NULL,&atx[57],&atx[109],0,NULL} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[110],NULL,0,NULL} ,
{416, "Seq-id" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[66]} ,
{0, "master3d" ,128,17,0,1,0,0,0,0,NULL,&atx[57],&atx[112],0,&atx[113]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[110],NULL,0,NULL} ,
{0, "alignannot" ,128,18,0,1,0,0,0,0,NULL,&atx[114],NULL,0,&atx[129]} ,
{440, "Align-annot-set" ,1,0,0,0,0,0,0,0,NULL,&atx[14],&atx[115],0,&atx[135]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[116],NULL,0,NULL} ,
{439, "Align-annot" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[117],0,&atx[114]} ,
{0, "location" ,128,0,0,0,0,0,0,0,NULL,&atx[41],NULL,0,&atx[118]} ,
{0, "description" ,128,1,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[119]} ,
{0, "evidence" ,128,2,0,1,0,0,0,0,NULL,&atx[14],&atx[120],0,&atx[128]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[121],NULL,0,NULL} ,
{438, "Feature-evidence" ,1,0,0,0,0,0,0,0,NULL,&atx[11],&atx[122],0,&atx[116]} ,
{0, "comment" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[123]} ,
{0, "reference" ,128,1,0,0,0,0,0,0,NULL,&atx[26],NULL,0,&atx[124]} ,
{0, "bsannot" ,128,2,0,0,0,0,0,0,NULL,&atx[62],NULL,0,&atx[125]} ,
{0, "seqfeat" ,128,3,0,0,0,0,0,0,NULL,&atx[126],NULL,0,&atx[127]} ,
{419, "Seq-feat" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[83]} ,
{0, "book-ref" ,128,4,0,0,0,0,0,0,NULL,&atx[47],NULL,0,NULL} ,
{0, "type" ,128,3,0,1,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
{0, "style-dictionary" ,128,19,0,1,0,0,0,0,NULL,&atx[130],NULL,0,&atx[131]} ,
{421, "Cn3d-style-dictionary" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[132]} ,
{0, "user-annotations" ,128,20,0,1,0,0,0,0,NULL,&atx[132],NULL,0,&atx[133]} ,
{422, "Cn3d-user-annotations" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[140]} ,
{0, "ancestors" ,128,21,0,1,0,0,0,0,NULL,&atx[14],&atx[134],0,&atx[139]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[135],NULL,0,NULL} ,
{441, "Domain-parent" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[136],0,&atx[142]} ,
{0, "parent-type" ,128,0,0,0,0,0,0,0,NULL,&atx[2],&avnx[40],0,&atx[137]} ,
{0, "parentid" ,128,1,0,0,0,0,0,0,NULL,&atx[0],NULL,0,&atx[138]} ,
{0, "seqannot" ,128,2,0,1,0,0,0,0,NULL,&atx[60],NULL,0,NULL} ,
{0, "scoreparams" ,128,22,0,1,0,0,0,0,NULL,&atx[140],NULL,0,&atx[141]} ,
{423, "PssmWithParameters" ,1,0,0,0,0,0,1,0,NULL,NULL,NULL,0,&atx[190]} ,
{0, "seqtree" ,128,23,0,1,0,0,0,0,NULL,&atx[142],NULL,0,NULL} ,
{442, "Sequence-tree" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[143],0,&atx[145]} ,
{0, "cdAccession" ,128,0,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[144]} ,
{0, "algorithm" ,128,1,0,0,0,0,0,0,NULL,&atx[145],NULL,0,&atx[156]} ,
{443, "Algorithm-type" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[146],0,&atx[159]} ,
{0, "scoring-Scheme" ,128,0,0,0,0,0,0,0,NULL,&atx[2],&avnx[45],0,&atx[147]} ,
{0, "clustering-Method" ,128,1,0,0,0,0,0,0,NULL,&atx[2],&avnx[55],0,&atx[148]} ,
{0, "score-Matrix" ,128,2,0,1,0,0,0,0,NULL,&atx[2],&avnx[60],0,&atx[149]} ,
{0, "gapOpen" ,128,3,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[150]} ,
{0, "gapExtend" ,128,4,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[151]} ,
{0, "gapScaleFactor" ,128,5,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[152]} ,
{0, "nTerminalExt" ,128,6,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[153]} ,
{0, "cTerminalExt" ,128,7,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[154]} ,
{0, "tree-scope" ,128,8,0,1,0,0,0,0,NULL,&atx[2],&avnx[68],0,&atx[155]} ,
{0, "coloring-scope" ,128,9,0,1,0,0,0,0,NULL,&atx[2],&avnx[72],0,NULL} ,
{0, "isAnnotated" ,128,2,0,0,1,0,0,0,&avnx[75],&atx[157],NULL,0,&atx[158]} ,
{301, "BOOLEAN" ,0,1,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{0, "root" ,128,3,0,0,0,0,0,0,NULL,&atx[159],NULL,0,NULL} ,
{444, "SeqTree-node" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[160],0,&atx[171]} ,
{0, "isAnnotated" ,128,0,0,0,1,0,0,0,&avnx[76],&atx[157],NULL,0,&atx[161]} ,
{0, "name" ,128,1,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[162]} ,
{0, "distance" ,128,2,0,1,0,0,0,0,NULL,&atx[163],NULL,0,&atx[164]} ,
{309, "REAL" ,0,9,0,0,0,0,0,0,NULL,NULL,NULL,0,NULL} ,
{0, "children" ,128,3,0,0,0,0,0,0,NULL,&atx[11],&atx[165],0,&atx[170]} ,
{0, "children" ,128,0,0,0,0,0,0,0,NULL,&atx[14],&atx[166],0,&atx[167]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[159],NULL,0,NULL} ,
{0, "footprint" ,128,1,0,0,0,0,0,0,NULL,&atx[10],&atx[168],0,NULL} ,
{0, "seqRange" ,128,0,0,0,0,0,0,0,NULL,&atx[66],NULL,0,&atx[169]} ,
{0, "rowId" ,128,1,0,1,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
{0, "annotation" ,128,4,0,1,0,0,0,0,NULL,&atx[171],NULL,0,NULL} ,
{445, "Node-annotation" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[172],0,&atx[213]} ,
{0, "presentInChildCD" ,128,0,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[173]} ,
{0, "note" ,128,1,0,1,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{404, "Cdd-set" ,1,0,0,0,0,1,0,0,NULL,&atx[57],&atx[175],0,&atx[176]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[15],NULL,0,NULL} ,
{405, "Cdd-tree" ,1,0,0,0,0,1,0,0,NULL,&atx[10],&atx[177],0,&atx[184]} ,
{0, "name" ,128,0,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[178]} ,
{0, "id" ,128,1,0,0,0,0,0,0,NULL,&atx[12],NULL,0,&atx[179]} ,
{0, "description" ,128,2,0,1,0,0,0,0,NULL,&atx[19],NULL,0,&atx[180]} ,
{0, "parent" ,128,3,0,1,0,0,0,0,NULL,&atx[0],NULL,0,&atx[181]} ,
{0, "children" ,128,4,0,1,0,0,0,0,NULL,&atx[12],NULL,0,&atx[182]} ,
{0, "siblings" ,128,5,0,1,0,0,0,0,NULL,&atx[12],NULL,0,&atx[183]} ,
{0, "neighbors" ,128,6,0,1,0,0,0,0,NULL,&atx[12],NULL,0,NULL} ,
{406, "Cdd-tree-set" ,1,0,0,0,0,1,0,0,NULL,&atx[14],&atx[185],0,&atx[186]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[176],NULL,0,NULL} ,
{407, "Cdd-pref-nodes" ,1,0,0,0,0,1,0,0,NULL,&atx[10],&atx[187],0,&atx[203]} ,
{0, "preferred-nodes" ,128,0,0,0,0,0,0,0,NULL,&atx[188],NULL,0,&atx[195]} ,
{425, "Cdd-org-ref-set" ,1,0,0,0,0,0,0,0,NULL,&atx[57],&atx[189],0,&atx[200]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[190],NULL,0,NULL} ,
{424, "Cdd-org-ref" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[191],0,&atx[188]} ,
{0, "reference" ,128,0,0,0,0,0,0,0,NULL,&atx[30],NULL,0,&atx[192]} ,
{0, "active" ,128,1,0,0,1,0,0,0,&avnx[77],&atx[157],NULL,0,&atx[193]} ,
{0, "parent-tax-id" ,128,2,0,1,0,0,0,0,NULL,&atx[2],NULL,0,&atx[194]} ,
{0, "rank" ,128,3,0,1,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{0, "model-organisms" ,128,1,0,1,0,0,0,0,NULL,&atx[188],NULL,0,&atx[196]} ,
{0, "optional-nodes" ,128,2,0,1,0,0,0,0,NULL,&atx[188],NULL,0,&atx[197]} ,
{0, "description" ,128,3,0,1,0,0,0,0,NULL,&atx[198],NULL,0,NULL} ,
{427, "Cdd-pref-node-descr-set" ,1,0,0,0,0,0,0,0,NULL,&atx[57],&atx[199],0,&atx[4]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[200],NULL,0,NULL} ,
{426, "Cdd-pref-node-descr" ,1,0,0,0,0,0,0,0,NULL,&atx[11],&atx[201],0,&atx[198]} ,
{0, "create-date" ,128,0,0,0,0,0,0,0,NULL,&atx[28],NULL,0,&atx[202]} ,
{0, "description" ,128,1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{408, "Cdd-Project" ,1,0,0,0,0,1,0,0,NULL,&atx[10],&atx[204],0,&atx[28]} ,
{0, "cds" ,128,0,0,0,0,0,0,0,NULL,&atx[14],&atx[205],0,&atx[206]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[15],NULL,0,NULL} ,
{0, "cdcolor" ,128,1,0,0,0,0,0,0,NULL,&atx[14],&atx[207],0,&atx[208]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
{0, "viewers" ,128,2,0,0,0,0,0,0,NULL,&atx[14],&atx[209],0,&atx[220]} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[210],NULL,0,NULL} ,
{447, "Cdd-Viewer" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[211],0,&atx[223]} ,
{0, "ctrl" ,128,0,0,0,0,0,0,0,NULL,&atx[2],&avnx[78],0,&atx[212]} ,
{0, "rect" ,128,1,0,1,0,0,0,0,NULL,&atx[213],NULL,0,&atx[218]} ,
{446, "Cdd-Viewer-Rect" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[214],0,&atx[210]} ,
{0, "top" ,128,0,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[215]} ,
{0, "left" ,128,1,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[216]} ,
{0, "width" ,128,2,0,0,0,0,0,0,NULL,&atx[2],NULL,0,&atx[217]} ,
{0, "height" ,128,3,0,0,0,0,0,0,NULL,&atx[2],NULL,0,NULL} ,
{0, "accessions" ,128,2,0,0,0,0,0,0,NULL,&atx[14],&atx[219],0,NULL} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} ,
{0, "log" ,128,3,0,0,0,0,0,0,NULL,&atx[6],NULL,0,&atx[221]} ,
{0, "scripts" ,128,4,0,1,0,0,0,0,NULL,&atx[14],&atx[222],0,NULL} ,
{0, NULL,1,-1,0,0,0,0,0,0,NULL,&atx[223],NULL,0,NULL} ,
{448, "Cdd-Script" ,1,0,0,0,0,0,0,0,NULL,&atx[10],&atx[224],0,NULL} ,
{0, "type" ,128,0,0,1,0,0,0,0,NULL,&atx[2],&avnx[90],0,&atx[225]} ,
{0, "name" ,128,1,0,1,0,0,0,0,NULL,&atx[6],NULL,0,&atx[226]} ,
{0, "commands" ,128,2,0,0,0,0,0,0,NULL,&atx[6],NULL,0,NULL} };
static AsnModule ampx[1] = {
{ "NCBI-Cdd" , "cdd.h24",&atx[0],NULL,NULL,0,0} };
static AsnValxNodePtr avn = avnx;
static AsnTypePtr at = atx;
static AsnModulePtr amp = ampx;
/**************************************************
*
* Defines for Module NCBI-Cdd
*
**************************************************/
#define CDD_ID &at[0]
#define CDD_ID_uid &at[1]
#define CDD_ID_gid &at[3]
#define CDD_ID_SET &at[12]
#define CDD_ID_SET_E &at[13]
#define CDD &at[15]
#define CDD_name &at[16]
#define CDD_id &at[17]
#define CDD_description &at[18]
#define CDD_seqannot &at[58]
#define CDD_seqannot_E &at[59]
#define CDD_features &at[61]
#define CDD_sequences &at[63]
#define CDD_profile_range &at[65]
#define CDD_trunc_master &at[67]
#define CDD_posfreq &at[69]
#define CDD_scoremat &at[78]
#define CDD_distance &at[79]
#define CDD_parent &at[86]
#define CDD_children &at[87]
#define CDD_siblings &at[88]
#define CDD_neighbors &at[89]
#define CDD_pending &at[90]
#define CDD_pending_E &at[91]
#define CDD_rejects &at[103]
#define CDD_rejects_E &at[104]
#define CDD_master3d &at[111]
#define CDD_master3d_E &at[112]
#define CDD_alignannot &at[113]
#define CDD_style_dictionary &at[129]
#define CDD_user_annotations &at[131]
#define CDD_ancestors &at[133]
#define CDD_ancestors_E &at[134]
#define CDD_scoreparams &at[139]
#define CDD_seqtree &at[141]
#define CDD_SET &at[174]
#define CDD_SET_E &at[175]
#define CDD_TREE &at[176]
#define CDD_TREE_name &at[177]
#define CDD_TREE_id &at[178]
#define CDD_TREE_description &at[179]
#define CDD_TREE_parent &at[180]
#define CDD_TREE_children &at[181]
#define CDD_TREE_siblings &at[182]
#define CDD_TREE_neighbors &at[183]
#define CDD_TREE_SET &at[184]
#define CDD_TREE_SET_E &at[185]
#define CDD_PREF_NODES &at[186]
#define CDD_PREF_NODES_preferred_nodes &at[187]
#define CDD_PREF_NODES_model_organisms &at[195]
#define CDD_PREF_NODES_optional_nodes &at[196]
#define CDD_PREF_NODES_description &at[197]
#define CDD_PROJECT &at[203]
#define CDD_PROJECT_cds &at[204]
#define CDD_PROJECT_cds_E &at[205]
#define CDD_PROJECT_cdcolor &at[206]
#define CDD_PROJECT_cdcolor_E &at[207]
#define CDD_PROJECT_viewers &at[208]
#define CDD_PROJECT_viewers_E &at[209]
#define CDD_PROJECT_log &at[220]
#define CDD_PROJECT_scripts &at[221]
#define CDD_PROJECT_scripts_E &at[222]
#define CDD_ORG_REF &at[190]
#define CDD_ORG_REF_reference &at[191]
#define CDD_ORG_REF_active &at[192]
#define CDD_ORG_REF_parent_tax_id &at[193]
#define CDD_ORG_REF_rank &at[194]
#define CDD_ORG_REF_SET &at[188]
#define CDD_ORG_REF_SET_E &at[189]
#define CDD_PREF_NODE_DESCR &at[200]
#define CDD_PREF_NODE_DESCR_create_date &at[201]
#define CDD_PREF_NODE_DESCR_description &at[202]
#define CDD_PREF_NODE_DESCR_SET &at[198]
#define CDD_PREF_NODE_DESCR_SET_E &at[199]
#define GLOBAL_ID &at[4]
#define GLOBAL_ID_accession &at[5]
#define GLOBAL_ID_release &at[7]
#define GLOBAL_ID_version &at[8]
#define GLOBAL_ID_database &at[9]
#define CDD_REPEAT &at[38]
#define CDD_REPEAT_count &at[39]
#define CDD_REPEAT_location &at[40]
#define CDD_REPEAT_avglen &at[42]
#define CDD_BOOK_REF &at[47]
#define CDD_BOOK_REF_bookname &at[48]
#define CDD_BOOK_REF_textelement &at[49]
#define CDD_BOOK_REF_elementid &at[51]
#define CDD_BOOK_REF_subelementid &at[52]
#define CDD_BOOK_REF_celementid &at[53]
#define CDD_BOOK_REF_csubelementid &at[54]
#define CDD_DESCR &at[21]
#define CDD_DESCR_othername &at[22]
#define CDD_DESCR_category &at[23]
#define CDD_DESCR_comment &at[24]
#define CDD_DESCR_reference &at[25]
#define CDD_DESCR_create_date &at[27]
#define CDD_DESCR_tax_source &at[29]
#define CDD_DESCR_source &at[31]
#define CDD_DESCR_status &at[32]
#define CDD_DESCR_update_date &at[33]
#define CDD_DESCR_scrapbook &at[34]
#define CDD_DESCR_scrapbook_E &at[35]
#define CDD_DESCR_source_id &at[36]
#define CDD_DESCR_repeats &at[37]
#define CDD_DESCR_old_root &at[43]
#define CDD_DESCR_curation_status &at[44]
#define CDD_DESCR_readonly_status &at[45]
#define CDD_DESCR_book_ref &at[46]
#define CDD_DESCR_attribution &at[55]
#define CDD_DESCR_title &at[56]
#define CDD_DESCR_SET &at[19]
#define CDD_DESCR_SET_E &at[20]
#define MATRIX &at[70]
#define MATRIX_ncolumns &at[71]
#define MATRIX_nrows &at[72]
#define MATRIX_row_labels &at[73]
#define MATRIX_row_labels_E &at[74]
#define MATRIX_scale_factor &at[75]
#define MATRIX_columns &at[76]
#define MATRIX_columns_E &at[77]
#define TRIANGLE &at[80]
#define TRIANGLE_nelements &at[81]
#define TRIANGLE_scores &at[82]
#define TRIANGLE_div_ranks &at[84]
#define TRIANGLE_div_ranks_E &at[85]
#define UPDATE_COMMENT &at[95]
#define UPDATE_COMMENT_comment &at[96]
#define UPDATE_COMMENT_addthis &at[97]
#define UPDATE_COMMENT_replaces &at[98]
#define UPDATE_COMMENT_reject_loc &at[99]
#define UPDATE_COMMENT_reference &at[100]
#define UPDATE_ALIGN &at[92]
#define UPDATE_ALIGN_description &at[93]
#define UPDATE_ALIGN_description_E &at[94]
#define UPDATE_ALIGN_seqannot &at[101]
#define UPDATE_ALIGN_type &at[102]
#define REJECT_ID &at[105]
#define REJECT_ID_description &at[106]
#define REJECT_ID_description_E &at[107]
#define REJECT_ID_ids &at[108]
#define REJECT_ID_ids_E &at[109]
#define FEATURE_EVIDENCE &at[121]
#define FEATURE_EVIDENCE_comment &at[122]
#define FEATURE_EVIDENCE_reference &at[123]
#define FEATURE_EVIDENCE_bsannot &at[124]
#define FEATURE_EVIDENCE_seqfeat &at[125]
#define FEATURE_EVIDENCE_book_ref &at[127]
#define ALIGN_ANNOT &at[116]
#define ALIGN_ANNOT_location &at[117]
#define ALIGN_ANNOT_description &at[118]
#define ALIGN_ANNOT_evidence &at[119]
#define ALIGN_ANNOT_evidence_E &at[120]
#define ALIGN_ANNOT_type &at[128]
#define ALIGN_ANNOT_SET &at[114]
#define ALIGN_ANNOT_SET_E &at[115]
#define DOMAIN_PARENT &at[135]
#define DOMAIN_PARENT_parent_type &at[136]
#define DOMAIN_PARENT_parentid &at[137]
#define DOMAIN_PARENT_seqannot &at[138]
#define SEQUENCE_TREE &at[142]
#define SEQUENCE_TREE_cdAccession &at[143]
#define SEQUENCE_TREE_algorithm &at[144]
#define SEQUENCE_TREE_isAnnotated &at[156]
#define SEQUENCE_TREE_root &at[158]
#define ALGORITHM_TYPE &at[145]
#define ALGORITHM_TYPE_scoring_Scheme &at[146]
#define ALGORITHM_TYPE_clustering_Method &at[147]
#define ALGORITHM_TYPE_score_Matrix &at[148]
#define ALGORITHM_TYPE_gapOpen &at[149]
#define ALGORITHM_TYPE_gapExtend &at[150]
#define ALGORITHM_TYPE_gapScaleFactor &at[151]
#define ALGORITHM_TYPE_nTerminalExt &at[152]
#define ALGORITHM_TYPE_cTerminalExt &at[153]
#define ALGORITHM_TYPE_tree_scope &at[154]
#define ALGORITHM_TYPE_coloring_scope &at[155]
#define SEQTREE_NODE &at[159]
#define SEQTREE_NODE_isAnnotated &at[160]
#define SEQTREE_NODE_name &at[161]
#define SEQTREE_NODE_distance &at[162]
#define SEQTREE_NODE_children &at[164]
#define SEQTREE_NODE_children_children &at[165]
#define SEQTREE_NODE_children_children_E &at[166]
#define SEQTREE_NODE_children_footprint &at[167]
#define SEQTREE_NODE_children_footprint_seqRange &at[168]
#define SEQTREE_NODE_children_footprint_rowId &at[169]
#define SEQTREE_NODE_annotation &at[170]
#define NODE_ANNOTATION &at[171]
#define NODE_ANNOTATION_presentInChildCD &at[172]
#define NODE_ANNOTATION_note &at[173]
#define CDD_VIEWER_RECT &at[213]
#define CDD_VIEWER_RECT_top &at[214]
#define CDD_VIEWER_RECT_left &at[215]
#define CDD_VIEWER_RECT_width &at[216]
#define CDD_VIEWER_RECT_height &at[217]
#define CDD_VIEWER &at[210]
#define CDD_VIEWER_ctrl &at[211]
#define CDD_VIEWER_rect &at[212]
#define CDD_VIEWER_accessions &at[218]
#define CDD_VIEWER_accessions_E &at[219]
#define CDD_SCRIPT &at[223]
#define CDD_SCRIPT_type &at[224]
#define CDD_SCRIPT_name &at[225]
#define CDD_SCRIPT_commands &at[226]
|