/usr/include/napi.h is in libnexus0-dev 4.3.2-svn1919-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 | /*---------------------------------------------------------------------------
NeXus - Neutron & X-ray Common Data Format
Application Program Interface Header File
Copyright (C) 2000-2011 Mark Koennecke, Uwe Filges
This library is free software; you can redistribute it and/or
modify it under the terms of the GNU Lesser General Public
License as published by the Free Software Foundation; either
version 2 of the License, or (at your option) any later version.
This library is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
Lesser General Public License for more details.
You should have received a copy of the GNU Lesser General Public
License along with this library; if not, write to the Free Software
Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
For further information, see <http://www.nexusformat.org>
$Id$
----------------------------------------------------------------------------*/
/** \file
* Documentation for the NeXus-API version 4.3
* 2000-2011, the NeXus International Advisory Commitee
* \defgroup c_main C API
* \defgroup c_types Data Types
* \ingroup c_main
* \defgroup c_init General Initialisation and shutdown
* \ingroup c_main
* \defgroup c_group Reading and Writing Groups
* \ingroup c_main
* \defgroup c_readwrite Reading and Writing Data
* \ingroup c_main
* \defgroup c_navigation General File navigation
* \ingroup c_main
* \defgroup c_metadata Meta data routines
* \ingroup c_main
* \defgroup c_linking Linking
* \ingroup c_main
* \defgroup c_memory Memory allocation
* \ingroup c_main
* \defgroup c_external External linking
* \ingroup c_main
*/
#ifndef NEXUSAPI
#define NEXUSAPI
#ifdef __cplusplus
//#include <cstdint> // needs c++11 support
#include <stdint.h>
#else
#include <stdint.h>
#endif /* __cplusplus */
/* NeXus HDF45 */
#define NEXUS_VERSION "4.3.2" /* major.minor.patch */
#define CONSTCHAR const char
typedef void* NXhandle; /* really a pointer to a NexusFile structure */
typedef int NXstatus;
typedef char NXname[128];
/*
* Any new NXaccess_mode options should be numbered in 2^n format
* (8, 16, 32, etc) so that they can be bit masked and tested easily.
*
* To test older non bit masked options (values below 8) use e.g.
*
* if ( (mode & NXACCMASK_REMOVEFLAGS) == NXACC_CREATE )
*
* To test new (>=8) options just use normal bit masking e.g.
*
* if ( mode & NXACC_NOSTRIP )
*
*/
#define NXACCMASK_REMOVEFLAGS (0x7) /* bit mask to remove higher flag options */
/** \enum NXaccess_mode
* NeXus file access codes.
* \li NXACC_READ read-only
* \li NXACC_RDWR open an existing file for reading and writing.
* \li NXACC_CREATE create a NeXus HDF-4 file
* \li NXACC_CREATE4 create a NeXus HDF-4 file
* \li NXACC_CREATE5 create a NeXus HDF-5 file.
* \li NXACC_CREATEXML create a NeXus XML file.
* \li NXACC_CHECKNAMESYNTAX Check names conform to NeXus allowed characters.
*/
typedef enum {NXACC_READ=1, NXACC_RDWR=2, NXACC_CREATE=3, NXACC_CREATE4=4,
NXACC_CREATE5=5, NXACC_CREATEXML=6, NXACC_TABLE=8, NXACC_NOSTRIP=128, NXACC_CHECKNAMESYNTAX=256 } NXaccess_mode;
/**
* A combination of options from #NXaccess_mode
*/
typedef int NXaccess;
typedef struct {
char *iname;
int type;
}info_type, *pinfo;
#define NX_OK 1
#define NX_ERROR 0
#define NX_EOD -1
#define NX_UNLIMITED -1
#define NX_MAXRANK 32
#define NX_MAXNAMELEN 64
#define NX_MAXPATHLEN 1024
/**
* \ingroup c_types
* \def NX_FLOAT32
* 32 bit float
* \def NX_FLOAT64
* 64 bit float == double
* \def NX_INT8
* 8 bit integer == byte
* \def NX_UINT8
* 8 bit unsigned integer
* \def NX_INT16
* 16 bit integer
* \def NX_UINT16
* 16 bit unsigned integer
* \def NX_INT32
* 32 bit integer
* \def NX_UINT32
* 32 bit unsigned integer
* \def NX_CHAR
* 8 bit character
* \def NX_BINARY
* lump of binary data == NX_UINT8
*/
/*--------------------------------------------------------------------------*/
/* Map NeXus to HDF types */
#define NX_FLOAT32 5
#define NX_FLOAT64 6
#define NX_INT8 20
#define NX_UINT8 21
#define NX_BOOLEAN NX_UINT
#define NX_INT16 22
#define NX_UINT16 23
#define NX_INT32 24
#define NX_UINT32 25
#define NX_INT64 26
#define NX_UINT64 27
#define NX_CHAR 4
#define NX_BINARY 21
/* Map NeXus compression methods to HDF compression methods */
#define NX_CHUNK 0
#define NX_COMP_NONE 100
#define NX_COMP_LZW 200
#define NX_COMP_RLE 300
#define NX_COMP_HUF 400
/* levels for deflate - to test for these we use ((value / 100) == NX_COMP_LZW) */
#define NX_COMP_LZW_LVL0 (100*NX_COMP_LZW + 0)
#define NX_COMP_LZW_LVL1 (100*NX_COMP_LZW + 1)
#define NX_COMP_LZW_LVL2 (100*NX_COMP_LZW + 2)
#define NX_COMP_LZW_LVL3 (100*NX_COMP_LZW + 3)
#define NX_COMP_LZW_LVL4 (100*NX_COMP_LZW + 4)
#define NX_COMP_LZW_LVL5 (100*NX_COMP_LZW + 5)
#define NX_COMP_LZW_LVL6 (100*NX_COMP_LZW + 6)
#define NX_COMP_LZW_LVL7 (100*NX_COMP_LZW + 7)
#define NX_COMP_LZW_LVL8 (100*NX_COMP_LZW + 8)
#define NX_COMP_LZW_LVL9 (100*NX_COMP_LZW + 9)
typedef struct {
long iTag; /* HDF4 variable */
long iRef; /* HDF4 variable */
char targetPath[1024]; /* path to item to link */
int linkType; /* HDF5: 0 for group link, 1 for SDS link */
} NXlink;
#define NXMAXSTACK 50
#define CONCAT(__a,__b) __a##__b /* token concatenation */
# ifdef __VMS
# define MANGLE(__arg) __arg
# else
# define MANGLE(__arg) CONCAT(__arg,_)
# endif
# define NXopen MANGLE(nxiopen)
# define NXreopen MANGLE(nxireopen)
# define NXclose MANGLE(nxiclose)
# define NXmakegroup MANGLE(nximakegroup)
# define NXopengroup MANGLE(nxiopengroup)
# define NXopenpath MANGLE(nxiopenpath)
# define NXgetpath MANGLE(nxigetpath)
# define NXopengrouppath MANGLE(nxiopengrouppath)
# define NXclosegroup MANGLE(nxiclosegroup)
# define NXmakedata MANGLE(nximakedata)
# define NXmakedata64 MANGLE(nximakedata64)
# define NXcompmakedata MANGLE(nxicompmakedata)
# define NXcompmakedata64 MANGLE(nxicompmakedata64)
# define NXcompress MANGLE(nxicompress)
# define NXopendata MANGLE(nxiopendata)
# define NXclosedata MANGLE(nxiclosedata)
# define NXputdata MANGLE(nxiputdata)
# define NXputslab MANGLE(nxiputslab)
# define NXputslab64 MANGLE(nxiputslab64)
# define NXputattr MANGLE(nxiputattr)
# define NXgetdataID MANGLE(nxigetdataid)
# define NXmakelink MANGLE(nximakelink)
# define NXmakenamedlink MANGLE(nximakenamedlink)
# define NXopensourcegroup MANGLE(nxiopensourcegroup)
# define NXmalloc MANGLE(nximalloc)
# define NXmalloc64 MANGLE(nximalloc64)
# define NXfree MANGLE(nxifree)
# define NXflush MANGLE(nxiflush)
# define NXgetinfo MANGLE(nxigetinfo)
# define NXgetinfo64 MANGLE(nxigetinfo64)
# define NXgetrawinfo MANGLE(nxigetrawinfo)
# define NXgetrawinfo64 MANGLE(nxigetrawinfo64)
# define NXgetnextentry MANGLE(nxigetnextentry)
# define NXgetdata MANGLE(nxigetdata)
# define NXgetslab MANGLE(nxigetslab)
# define NXgetslab64 MANGLE(nxigetslab64)
# define NXgetnextattr MANGLE(nxigetnextattr)
# define NXgetattr MANGLE(nxigetattr)
# define NXgetattrinfo MANGLE(nxigetattrinfo)
# define NXgetgroupID MANGLE(nxigetgroupid)
# define NXgetgroupinfo MANGLE(nxigetgroupinfo)
# define NXsameID MANGLE(nxisameid)
# define NXinitgroupdir MANGLE(nxiinitgroupdir)
# define NXinitattrdir MANGLE(nxiinitattrdir)
# define NXsetnumberformat MANGLE(nxisetnumberformat)
# define NXsetcache MANGLE(nxisetcache)
# define NXinquirefile MANGLE(nxiinquirefile)
# define NXisexternalgroup MANGLE(nxiisexternalgroup)
# define NXisexternaldataset MANGLE(nxiisexternaldataset)
# define NXlinkexternal MANGLE(nxilinkexternal)
# define NXlinkexternaldataset MANGLE(nxilinkexternaldataset)
# define NXgetversion MANGLE(nxigetversion)
/*
* FORTRAN helpers - for NeXus internal use only
*/
# define NXfopen MANGLE(nxifopen)
# define NXfclose MANGLE(nxifclose)
# define NXfflush MANGLE(nxifflush)
# define NXfmakedata MANGLE(nxifmakedata)
# define NXfcompmakedata MANGLE(nxifcompmakedata)
# define NXfcompress MANGLE(nxifcompress)
# define NXfputattr MANGLE(nxifputattr)
# define NXfgetpath MANGLE(nxifgetpath)
/*
* Standard interface
*
* Functions added here are not automatically exported from
* a shared library/dll - the symbol name must also be added
* to the file src/nexus_symbols.txt
*
*/
#ifdef __cplusplus
extern "C" {
#endif /* __cplusplus */
/**
* Open a NeXus file.
* NXopen honours full path file names. But it also searches
* for files in all the paths given in the NX_LOAD_PATH environment variable.
* NX_LOAD_PATH is supposed to hold a list of path string separated by the platform
* specific path separator. For unix this is the : , for DOS the ; . Please note
* that crashing on an open NeXus file will result in corrupted data. Only after a NXclose
* or a NXflush will the data file be valid.
* \param filename The name of the file to open
* \param access_method The file access method. This can be:
* \li NXACC__READ read access
* \li NXACC_RDWR read write access
* \li NXACC_CREATE, NXACC_CREATE4 create a new HDF-4 NeXus file
* \li NXACC_CREATE5 create a new HDF-5 NeXus file
* \li NXACC_CREATEXML create an XML NeXus file.
* see #NXaccess_mode
* Support for HDF-4 is deprecated.
* \param pHandle A file handle which will be initialized upon successfull completeion of NXopen.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_init
*/
extern NXstatus NXopen(CONSTCHAR * filename, NXaccess access_method, NXhandle* pHandle);
/**
* Opens an existing NeXus file a second time for e.g. access from another thread.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_init
*/
extern NXstatus NXreopen(NXhandle pOrigHandle, NXhandle* pNewHandle);
/**
* close a NeXus file
* \param pHandle A NeXus file handle as returned from NXopen. pHandle is invalid after this
* call.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_init
*/
extern NXstatus NXclose(NXhandle* pHandle);
/**
* flush data to disk
* \param pHandle A NeXus file handle as initialized by NXopen.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXflush(NXhandle* pHandle);
/**
* NeXus groups are NeXus way of structuring information into a hierarchy.
* This function creates a group but does not open it.
* \param handle A NeXus file handle as initialized NXopen.
* \param name The name of the group
* \param NXclass the class name of the group. Should start with the prefix NX
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_group
*/
extern NXstatus NXmakegroup (NXhandle handle, CONSTCHAR *name, CONSTCHAR* NXclass);
/**
* Step into a group. All further access will be within the opened group.
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the group
* \param NXclass the class name of the group. Should start with the prefix NX
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_group
*/
extern NXstatus NXopengroup (NXhandle handle, CONSTCHAR *name, CONSTCHAR* NXclass);
/**
* Open the NeXus object with the path specified
* \param handle A NeXus file handle as returned from NXopen.
* \param path A unix like path string to a NeXus group or dataset. The path string
* is a list of group names and SDS names separated with / (slash).
* Example: /entry1/sample/name
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_navigation
*/
extern NXstatus NXopenpath (NXhandle handle, CONSTCHAR *path);
/**
* Opens the group in which the NeXus object with the specified path exists
* \param handle A NeXus file handle as initialized by NXopen.
* \param path A unix like path string to a NeXus group or dataset. The path string
* is a list of group names and SDS names separated with / (slash).
* Example: /entry1/sample/name
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_navigation
*/
extern NXstatus NXopengrouppath (NXhandle handle, CONSTCHAR *path);
/**
* Retrieve the current path in the NeXus file
* \param handle a NeXus file handle
* \param path A buffer to copy the path too
* \param pathlen The maximum number of characters to copy into path
* \return NX_OK or NX_ERROR
* \ingroup c_navigation
*/
extern NXstatus NXgetpath(NXhandle handle, char *path, int pathlen);
/**
* Closes the currently open group and steps one step down in the NeXus file
* hierarchy.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_group
*/
extern NXstatus NXclosegroup(NXhandle handle);
/**
* Create a multi dimensional data array or dataset. The dataset is NOT opened.
* \param handle A NeXus file handle as initialized by NXopen.
* \param label The name of the dataset
* \param datatype The data type of this data set.
* \param rank The number of dimensions this dataset is going to have
* \param dim An array of size rank holding the size of the dataset in each dimension. The first dimension
* can be NX_UNLIMITED. Data can be appended to such a dimension using NXputslab.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXmakedata (NXhandle handle, CONSTCHAR* label, int datatype, int rank, int dim[]);
/**
* @copydoc NXmakedata()
*/
extern NXstatus NXmakedata64 (NXhandle handle, CONSTCHAR* label, int datatype, int rank, int64_t dim[]);
/**
* Create a compressed dataset. The dataset is NOT opened. Data from this set will automatically be compressed when
* writing and decompressed on reading.
* \param handle A NeXus file handle as initialized by NXopen.
* \param label The name of the dataset
* \param datatype The data type of this data set.
* \param rank The number of dimensions this dataset is going to have
* \param comp_typ The compression scheme to use. Possible values:
* \li NX_COMP_NONE no compression
* \li NX_COMP_LZW (recommended) despite the name this enabled zlib compression (of various levels, see above)
* \li NX_COMP_RLE run length encoding (only HDF-4)
* \li NX_COMP_HUF Huffmann encoding (only HDF-4)
* \param dim An array of size rank holding the size of the dataset in each dimension. The first dimension
* can be NX_UNLIMITED. Data can be appended to such a dimension using NXputslab.
* \param bufsize The dimensions of the subset of the data which usually be writen in one go.
* This is a parameter used by HDF for performance optimisations. If you write your data in one go, this
* should be the same as the data dimension. If you write it in slabs, this is your preferred slab size.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXcompmakedata (NXhandle handle, CONSTCHAR* label, int datatype, int rank, int dim[], int comp_typ, int bufsize[]);
/**
* @copydoc NXcompmakedata()
*/
extern NXstatus NXcompmakedata64 (NXhandle handle, CONSTCHAR* label, int datatype, int rank, int64_t dim[], int comp_typ, int64_t chunk_size[]);
/**
* Switch compression on. This routine is superseeded by NXcompmakedata and thus
* is deprecated.
* \param handle A NeXus file handle as initialized by NXopen.
* \param compr_type The compression scheme to use. Possible values:
* \li NX_COMP_NONE no compression
* \li NX_COMP_LZW (recommended) despite the name this enabled zlib compression (of various levels, see above)
* \li NX_COMP_RLE run length encoding (only HDF-4)
* \li NX_COMP_HUF Huffmann encoding (only HDF-4)
* \ingroup c_readwrite
*/
extern NXstatus NXcompress (NXhandle handle, int compr_type);
/**
* Open access to a dataset. After this call it is possible to write and read data or
* attributes to and from the dataset.
* \param handle A NeXus file handle as initialized by NXopen.
* \param label The name of the dataset
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXopendata (NXhandle handle, CONSTCHAR* label);
/**
* Close access to a dataset.
* \param handle A NeXus file handle as initialized by NXopen.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXclosedata(NXhandle handle);
/**
* Write data to a datset which has previouly been opened with NXopendata.
* This writes all the data in one go. Data should be a pointer to a memory
* area matching the datatype and dimensions of the dataset.
* \param handle A NeXus file handle as initialized by NXopen.
* \param data Pointer to data to write.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXputdata(NXhandle handle, const void* data);
/**
* Write an attribute. The kind of attribute written depends on the
* poistion in the file: at root level, a global attribute is written, if
* agroup is open but no dataset, a group attribute is written, if a dataset is
* open, a dataset attribute is written.
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the attribute.
* \param data A pointer to the data to write for the attribute.
* \param iDataLen The length of the data in data in bytes.
* \param iType The NeXus data type of the attribute.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXputattr(NXhandle handle, CONSTCHAR* name, const void* data, int iDataLen, int iType);
/**
* Write a subset of a multi dimensional dataset.
* \param handle A NeXus file handle as initialized by NXopen.
* \param data A pointer to a memory area holding the data to write.
* \param start An array holding the start indices where to start the data subset.
* \param size An array holding the size of the data subset to write in each dimension.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXputslab(NXhandle handle, const void* data, const int start[], const int size[]);
/**
* @copydoc NXputdata()
*/
extern NXstatus NXputslab64(NXhandle handle, const void* data, const int64_t start[], const int64_t size[]);
/**
* Retrieve link data for a dataset. This link data can later on be used to link this
* dataset into a different group.
* \param handle A NeXus file handle as initialized by NXopen.
* \param pLink A link data structure which will be initialized with the required information
* for linking.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_linking
*/
extern NXstatus NXgetdataID(NXhandle handle, NXlink* pLink);
/**
* Create a link to the group or dataset described by pLink in the currently open
* group.
* \param handle A NeXus file handle as initialized by NXopen.
* \param pLink A link data structure describing the object to link. This must have been initialized
* by either a call to NXgetdataID or NXgetgroupID.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_linking
*/
extern NXstatus NXmakelink(NXhandle handle, NXlink* pLink);
/**
* Create a link to the group or dataset described by pLink in the currently open
* group. But give the linked item a new name.
* \param handle A NeXus file handle as initialized by NXopen.
* \param newname The new name of the item in the currently open group.
* \param pLink A link data structure describing the object to link. This must have been initialized
* by either a call to NXgetdataID or NXgetgroupID.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_linking
*/
extern NXstatus NXmakenamedlink(NXhandle handle, CONSTCHAR* newname, NXlink* pLink);
/**
* Open the source group of a linked group or dataset. Returns an error when the item is
* not a linked item.
* \param handle A NeXus file handle as initialized by NXopen.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_navigation
*/
extern NXstatus NXopensourcegroup(NXhandle handle);
/**
* Read a complete dataset from the currently open dataset into memory.
* \param handle A NeXus file handle as initialized by NXopen.
* \param data A pointer to the memory area where to read the data, too. Data must point to a memory
* area large enough to accomodate the data read. Otherwise your program may behave in unexpected
* and unwelcome ways.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXgetdata(NXhandle handle, void* data);
/**
* Retrieve information about the curretly open dataset.
* \param handle A NeXus file handle as initialized by NXopen.
* \param rank A pointer to an integer which will be filled with the rank of
* the dataset.
* \param dimension An array which will be initialized with the size of the dataset in any of its
* dimensions. The array must have at least the size of rank.
* \param datatype A pointer to an integer which be set to the NeXus data type code for this dataset.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_metadata
*/
extern NXstatus NXgetinfo(NXhandle handle, int* rank, int dimension[], int* datatype);
/**
* @copydoc NXgetinfo()
*/
extern NXstatus NXgetinfo64(NXhandle handle, int* rank, int64_t dimension[], int* datatype);
/**
* Get the next entry in the currently open group. This is for retrieving infromation about the
* content of a NeXus group. In order to search a group #NXgetnextentry is called in a loop until
* #NXgetnextentry returns NX_EOD which indicates that there are no further items in the group.
* Reset search using #NXinitgroupdir
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the object
* \param nxclass The NeXus class name for a group or the string SDS for a dataset.
* \param datatype The NeXus data type if the item is a SDS.
* \return NX_OK on success, NX_ERROR in the case of an error, NX_EOD when there are no more items.
* \ingroup c_navigation
*/
extern NXstatus NXgetnextentry(NXhandle handle, NXname name, NXname nxclass, int* datatype);
/**
* Read a subset of data from file into memory.
* \param handle A NeXus file handle as initialized by NXopen.
* \param data A pointer to the memory data where to copy the data too. The pointer must point
* to a memory area large enough to accomodate the size of the data read.
* \param start An array holding the start indices where to start reading the data subset.
* \param size An array holding the size of the data subset to read for each dimension.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXgetslab(NXhandle handle, void* data, const int start[], const int size[]);
/**
* @copydoc NXgetslab()
*/
extern NXstatus NXgetslab64(NXhandle handle, void* data, const int64_t start[], const int64_t size[]);
/**
* Iterate over global, group or dataset attributes depending on the currently open group or
* dataset. In order to search attributes multiple calls to #NXgetnextattr are performed in a loop
* until #NXgetnextattr returns NX_EOD which indicates that there are no further attributes.
* reset search using #NXinitattrdir
* \param handle A NeXus file handle as initialized by NXopen.
* \param pName The name of the attribute
* \param iLength A pointer to an integer which be set to the length of the attribute data.
* \param iType A pointer to an integer which be set to the NeXus data type of the attribute.
* \return NX_OK on success, NX_ERROR in the case of an error, NX_EOD when there are no more items.
* \ingroup c_readwrite
*/
extern NXstatus NXgetnextattr(NXhandle handle, NXname pName, int *iLength, int *iType);
/**
* Read an attribute.
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the atrribute to read.
* \param data A pointer to a memory area large enough to hold the attributes value.
* \param iDataLen The length of data in bytes.
* \param iType A pointer to an integer which will had been set to the NeXus data type of the attribute.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXgetattr(NXhandle handle, char* name, void* data, int* iDataLen, int* iType);
/**
* Get the count of attributes in the currently open dataset, group or global attributes when at root level.
* \param handle A NeXus file handle as initialized by NXopen.
* \param no_items A pointer to an integer which be set to the number of attributes available.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_metadata
*/
extern NXstatus NXgetattrinfo(NXhandle handle, int* no_items);
/**
* Retrieve link data for the currently open group. This link data can later on be used to link this
* group into a different group.
* \param handle A NeXus file handle as initialized by NXopen.
* \param pLink A link data structure which will be initialized with the required information
* for linking.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_linking
*/
extern NXstatus NXgetgroupID(NXhandle handle, NXlink* pLink);
/**
* Retrieve information about the currently open group.
* \param handle A NeXus file handle as initialized by NXopen.
* \param no_items A pointer to an integer which will be set to the count
* of group elements available. This is the count of other groups and
* data sets in this group.
* \param name The name of the group.
* \param nxclass The NeXus class name of the group.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_metadata
*/
extern NXstatus NXgetgroupinfo(NXhandle handle, int* no_items, NXname name, NXname nxclass);
/**
* Tests if two link data structures describe the same item.
* \param handle A NeXus file handle as initialized by NXopen.
* \param pFirstID The first link data for the test.
* \param pSecondID The second link data structure.
* \return NX_OK when both link data structures describe the same item, NX_ERROR else.
* \ingroup c_linking
*/
extern NXstatus NXsameID(NXhandle handle, NXlink* pFirstID, NXlink* pSecondID);
/**
* Resets a pending group search to the start again. To be called in a #NXgetnextentry loop when
* a group search has to be restarted.
* \param handle A NeXus file handle as initialized by NXopen.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_navigation
*/
extern NXstatus NXinitgroupdir(NXhandle handle);
/**
* Resets a pending attribute search to the start again. To be called in a #NXgetnextattr loop when
* an attribute search has to be restarted.
* \param handle A NeXus file handle as initialized by NXopen.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_navigation
*/
extern NXstatus NXinitattrdir(NXhandle handle);
/**
* Sets the format for number printing. This call has only an effect when using the XML physical file
* format.
* \param handle A NeXus file handle as initialized by NXopen.
* \param type The NeXus data type to set the format for.
* \param format The C-language format string to use for this data type.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_readwrite
*/
extern NXstatus NXsetnumberformat(NXhandle handle, int type, char *format);
/**
* Inquire the filename of the currently open file. FilenameBufferLength of the file name
* will be copied into the filename buffer.
* \param handle A NeXus file handle as initialized by NXopen.
* \param filename The buffer to hold the filename.
* \param filenameBufferLength The length of the filename buffer.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_metadata
*/
extern NXstatus NXinquirefile(NXhandle handle, char *filename, int filenameBufferLength);
/**
* Test if a group is actually pointing to an external file. If so, retrieve the URL of the
* external file.
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the group to test.
* \param nxclass The class name of the group to test.
* \param url A buffer to copy the URL too.
* \param urlLen The length of the Url buffer. At maximum urlLen bytes will be copied to url.
* \return NX_OK when the group is pointing to an external file, NX_ERROR else.
* \ingroup c_external
*/
extern NXstatus NXisexternalgroup(NXhandle handle, CONSTCHAR *name, CONSTCHAR *nxclass, char *url, int urlLen);
/**
* Test if a dataset is actually pointing to an external file. If so, retrieve the URL of the
* external file.
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the dataset to test.
* \param url A buffer to copy the URL too.
* \param urlLen The length of the Url buffer. At maximum urlLen bytes will be copied to url.
* \return NX_OK when the dataset is pointing to an external file, NX_ERROR else.
* \ingroup c_external
*/
extern NXstatus NXisexternaldataset(NXhandle handle, CONSTCHAR *name, char *url, int urlLen);
/**
* Create a link to a group in an external file. This works by creating a NeXus group under the current level in
* the hierarchy which actually points to a group in another file.
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the group which points to the external file.
* \param nxclass The class name of the group which points to the external file.
* \param url The URL of the external file. Currently only one URL format is supported: nxfile://path-tofile\#path-in-file.
* This consists of two parts: the first part is of course the path to the file. The second part, path-in-file, is the
* path to the group in the external file which appears in the first file.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_external
*/
extern NXstatus NXlinkexternal(NXhandle handle, CONSTCHAR *name, CONSTCHAR *nxclass, CONSTCHAR *url);
/**
* Create a link to a dataset in an external file. This works by creating a dataset under the current level in
* the hierarchy which actually points to a dataset in another file.
* \param handle A NeXus file handle as initialized by NXopen.
* \param name The name of the dataset which points to the external file.
* \param url The URL of the external file. Currently only one URL format is supported: nxfile://path-tofile\#path-in-file.
* This consists of two parts: the first part is of course the path to the file. The second part, path-in-file, is the
* path to the dataset in the external file which appears in the first file.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_external
*/
extern NXstatus NXlinkexternaldataset(NXhandle handle, CONSTCHAR *name, CONSTCHAR *url);
/**
* Utility function which allocates a suitably sized memory area for the dataset characteristics specified.
* \param data A pointer to a pointer which will be initialized with a pointer to a suitably sized memory area.
* \param rank the rank of the data.
* \param dimensions An array holding the size of the data in each dimension.
* \param datatype The NeXus data type of the data.
* \return NX_OK when allocation succeeds, NX_ERROR in the case of an error.
* \ingroup c_memory
*/
extern NXstatus NXmalloc(void** data, int rank, const int dimensions[], int datatype);
/**
* @copydoc NXmalloc()
*/
extern NXstatus NXmalloc64(void** data, int rank, const int64_t dimensions[], int datatype);
/**
* Utility function to return NeXus version
* \return pointer to string in static storage. Version in
* same format as NEXUS_VERSION string in napi.h i.e. "major.minor.patch"
* \ingroup c_metadata
*/
extern const char* NXgetversion();
/**
* Utility function to release the memory for data.
* \param data A pointer to a pointer to free.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_memory
*/
extern NXstatus NXfree(void** data);
/*-----------------------------------------------------------------------
NAPI internals
------------------------------------------------------------------------*/
/**
* Retrieve information about the currently open dataset. In contrast to the main function below,
* this function does not try to find out about the size of strings properly.
* \param handle A NeXus file handle as initialized by NXopen.
* \param rank A pointer to an integer which will be filled with the rank of
* the dataset.
* \param dimension An array which will be initialized with the size of the dataset in any of its
* dimensions. The array must have at least the size of rank.
* \param datatype A pointer to an integer which be set to the NeXus data type code for this dataset.
* \return NX_OK on success, NX_ERROR in the case of an error.
* \ingroup c_metadata
*/
extern NXstatus NXgetrawinfo(NXhandle handle, int* rank, int dimension[], int* datatype);
/**
* @copydoc NXgetrawinfo
*/
extern NXstatus NXgetrawinfo64(NXhandle handle, int* rank, int64_t dimension[], int* datatype);
/** \typedef void (*ErrFunc)(void *data, char *text)
* All NeXus error reporting happens through this special function, the
* ErrFunc. The NeXus-API allows to replace this error reporting function
* through a user defined implementation. The default error function prints to stderr. User
* defined ones may pop up dialog boxes or whatever.
* \param data A pointer to some user defined data structure
* \param text The text of the error message to display.
*/
typedef void (*ErrFunc)(void *data, char *text);
/**
* Set a global error function.
* Not threadsafe.
* \param pData A pointer to a user defined data structure which be passed to
* the error display function.
* \param newErr The new error display function.
*/
extern void NXMSetError(void *pData, ErrFunc newErr);
/**
* Set an error function for the current thread.
* When used this overrides anything set in NXMSetError (for the current thread).
* Use this method in threaded applications.
* \param pData A pointer to a user defined data structure which be passed to
* the error display function.
* \param newErr The new error display function.
*/
extern void NXMSetTError(void *pData, ErrFunc newErr);
/**
* Retrieve the current error display function
* \return The current error display function.
*/
extern ErrFunc NXMGetError();
/**
* Suppress error reports from the NeXus-API
*/
extern void NXMDisableErrorReporting();
/**
* Enable error reports from the NeXus-API
*/
extern void NXMEnableErrorReporting();
/**
* Dispatches the error message to the error function defined by NXMSetTError
*/
extern void NXReportError(char *text);
/**
* Do not use, first parameter should be set by NXMSetTError
*/
extern void NXIReportError(void *pData,char *text);
/* extern void *NXpData; */
extern char *NXIformatNeXusTime();
extern NXstatus NXIprintlink(NXhandle fid, NXlink* link);
/**
* A function for setting the default cache size for HDF-5
* \ingroup c_init
*/
extern NXstatus NXsetcache(long newVal);
typedef struct {
NXhandle pNexusData;
NXstatus ( *nxreopen)(NXhandle pOrigHandle, NXhandle* pNewHandle);
NXstatus ( *nxclose)(NXhandle* pHandle);
NXstatus ( *nxflush)(NXhandle* pHandle);
NXstatus ( *nxmakegroup) (NXhandle handle, CONSTCHAR *name, CONSTCHAR* NXclass);
NXstatus ( *nxopengroup) (NXhandle handle, CONSTCHAR *name, CONSTCHAR* NXclass);
NXstatus ( *nxclosegroup)(NXhandle handle);
NXstatus ( *nxmakedata64) (NXhandle handle, CONSTCHAR* label, int datatype, int rank, int64_t dim[]);
NXstatus ( *nxcompmakedata64) (NXhandle handle, CONSTCHAR* label, int datatype, int rank, int64_t dim[], int comp_typ, int64_t bufsize[]);
NXstatus ( *nxcompress) (NXhandle handle, int compr_type);
NXstatus ( *nxopendata) (NXhandle handle, CONSTCHAR* label);
NXstatus ( *nxclosedata)(NXhandle handle);
NXstatus ( *nxputdata)(NXhandle handle, const void* data);
NXstatus ( *nxputattr)(NXhandle handle, CONSTCHAR* name, const void* data, int iDataLen, int iType);
NXstatus ( *nxputslab64)(NXhandle handle, const void* data, const int64_t start[], const int64_t size[]);
NXstatus ( *nxgetdataID)(NXhandle handle, NXlink* pLink);
NXstatus ( *nxmakelink)(NXhandle handle, NXlink* pLink);
NXstatus ( *nxmakenamedlink)(NXhandle handle, CONSTCHAR *newname, NXlink* pLink);
NXstatus ( *nxgetdata)(NXhandle handle, void* data);
NXstatus ( *nxgetinfo64)(NXhandle handle, int* rank, int64_t dimension[], int* datatype);
NXstatus ( *nxgetnextentry)(NXhandle handle, NXname name, NXname nxclass, int* datatype);
NXstatus ( *nxgetslab64)(NXhandle handle, void* data, const int64_t start[], const int64_t size[]);
NXstatus ( *nxgetnextattr)(NXhandle handle, NXname pName, int *iLength, int *iType);
NXstatus ( *nxgetattr)(NXhandle handle, char* name, void* data, int* iDataLen, int* iType);
NXstatus ( *nxgetattrinfo)(NXhandle handle, int* no_items);
NXstatus ( *nxgetgroupID)(NXhandle handle, NXlink* pLink);
NXstatus ( *nxgetgroupinfo)(NXhandle handle, int* no_items, NXname name, NXname nxclass);
NXstatus ( *nxsameID)(NXhandle handle, NXlink* pFirstID, NXlink* pSecondID);
NXstatus ( *nxinitgroupdir)(NXhandle handle);
NXstatus ( *nxinitattrdir)(NXhandle handle);
NXstatus ( *nxsetnumberformat)(NXhandle handle, int type, char *format);
NXstatus ( *nxprintlink)(NXhandle handle, NXlink* link);
NXstatus ( *nxnativeexternallink)(NXhandle handle, CONSTCHAR* name, CONSTCHAR* externalfile, CONSTCHAR* remotetarget);
NXstatus ( *nxnativeinquirefile)(NXhandle handle, char* externalfile, const int filenamelength);
NXstatus ( *nxnativeisexternallink)(NXhandle handle, CONSTCHAR* name, char* url, int urllen);
int stripFlag;
int checkNameSyntax;
} NexusFunction, *pNexusFunction;
/*---------------------*/
extern long nx_cacheSize;
/* FORTRAN internals */
extern NXstatus NXfopen(char * filename, NXaccess* am,
NXhandle pHandle);
extern NXstatus NXfclose (NXhandle pHandle);
extern NXstatus NXfputattr(NXhandle fid, const char *name, const void *data,
int *pDatalen, int *pIType);
extern NXstatus NXfcompress(NXhandle fid, int *compr_type);
extern NXstatus NXfcompmakedata(NXhandle fid, char *name,
int *pDatatype,
int *pRank, int dimensions[],
int *compression_type, int chunk[]);
extern NXstatus NXfmakedata(NXhandle fid, char *name, int *pDatatype,
int *pRank, int dimensions[]);
extern NXstatus NXfflush(NXhandle pHandle);
extern NXstatus NXfgetpath(NXhandle fid, char *path, int *pathlen);
#ifdef __cplusplus
};
#endif /* __cplusplus */
/**
* Freddie Akeroyd 11/8/2009
* Add NeXus schema support - this uses BASE.xsd as the initial file
*/
#define NEXUS_SCHEMA_VERSION "3.1" /**< version of NeXus definition schema */
#define NEXUS_SCHEMA_ROOT "http://definition.nexusformat.org/schema/" /**< XML schema namespace specified by xmlns */
#define NEXUS_SCHEMA_NAMESPACE NEXUS_SCHEMA_ROOT NEXUS_SCHEMA_VERSION /**< XML schema namespace specified by xmlns */
#define NEXUS_SCHEMA_BASE "BASE"
#define NEXUS_SCHEMA_FILE NEXUS_SCHEMA_BASE ".xsd" /**< default schema file for namespace */
#define NEXUS_SCHEMA_URL NEXUS_SCHEMA_NAMESPACE "/" NEXUS_SCHEMA_FILE /**< location of default schema file for namespace */
#endif /*NEXUSAPI*/
|