This file is indexed.

/usr/include/OpenMS/CONCEPT/BinaryComposeFunctionAdapter.h is in libopenms-dev 1.11.1-3.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
// --------------------------------------------------------------------------
//                   OpenMS -- Open-Source Mass Spectrometry
// --------------------------------------------------------------------------
// Copyright The OpenMS Team -- Eberhard Karls University Tuebingen,
// ETH Zurich, and Freie Universitaet Berlin 2002-2013.
//
// This software is released under a three-clause BSD license:
//  * Redistributions of source code must retain the above copyright
//    notice, this list of conditions and the following disclaimer.
//  * Redistributions in binary form must reproduce the above copyright
//    notice, this list of conditions and the following disclaimer in the
//    documentation and/or other materials provided with the distribution.
//  * Neither the name of any author or any participating institution
//    may be used to endorse or promote products derived from this software
//    without specific prior written permission.
// For a full list of authors, refer to the file AUTHORS.
// --------------------------------------------------------------------------
// THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
// AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
// ARE DISCLAIMED. IN NO EVENT SHALL ANY OF THE AUTHORS OR THE CONTRIBUTING
// INSTITUTIONS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// --------------------------------------------------------------------------
// $Maintainer: Stephan Aiche $
// $Authors: Anton Pervukhin <Anton.Pervukhin@CeBiTec.Uni-Bielefeld.DE> $
// --------------------------------------------------------------------------
//

#ifndef OPENMS_CONCEPT_BINARYCOMPOSEFUNCTIONADAPTER_H
#define OPENMS_CONCEPT_BINARYCOMPOSEFUNCTIONADAPTER_H

#include <functional>

namespace OpenMS
{

  /**
    @brief Represents the binary compose function object adapter.

    @c compose_f_gx_hy_t compose function adapter processes the result of two unary operations that
    use different elements as parameters. For more details, please
    refer to the book "The C++ Standart Library" by Nicolay Josuttis.
    This class is implemented in order to reduce (substitute) the usage of user defined functors.

    Here is the example of @c compose_f_gx_hy_t usage with @c std::mem_ref_fun function.
    to sort elements in container based on the certain element's property.
    @code
#include <string>
#include <vector>
using namespace std;

class Element {
public:
  Element(const string& a) : _a(a) {}
  const string& getA() const { return _a; }
private:
  string _a;
};

int main(int argc, char** argv) {

  Element a("Matthias"), b("Marcel"), c("Anton"), d("Henner");

  vector<Element> elements;
  elements.push_back(a);
  elements.push_back(b);
  elements.push_back(c);
  elements.push_back(d);

  // the below function sorts elements based on the &Element::getA result value
  sort(elements.begin(), elements.end(),
              binaryCompose(
                      less<string>(),
                      mem_fun_ref(&Element::getA),
                      mem_fun_ref(&Element::getA)));
  return 0;
}
    @endcode

    Copyright 1999 by Addison Wesley Longman, Inc. and Nicolai M. Josuttis.
    All rights reserved.

    Permission to use, copy, modify and distribute this software for personal and
    educational use is hereby granted without fee, provided that the above copyright
    notice appears in all copies and that both that copyright notice and this
    permission notice appear in supporting documentation, and that the names of Addison
    Wesley Longman or the author are not used in advertising or publicity pertaining
    to distribution of the software without specific, written prior permission. Addison
    Wesley Longman and the author make no representations about the suitability of this
    software for any purpose. It is provided "as is" without express or implied warranty.

    ADDISON WESLEY LONGMAN AND THE AUTHOR DISCLAIM ALL WARRANTIES WITH REGARD TO THIS
    SOFTWARE, INCLUDING ALL IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS. IN NO EVENT
    SHALL ADDISON WESLEY LONGMAN OR THE AUTHOR BE LIABLE FOR ANY SPECIAL, INDIRECT OR
    CONSEQUENTIAL DAMAGES OR ANY DAMAGES WHATSOEVER RESULTING FROM LOSS OF USE, DATA OR
    PROFITS, WHETHER IN AN ACTION OF CONTRACT, NEGLIGENCE OR OTHER TORTIOUS ACTION, ARISING
    OUT OF OR IN CONNECTION WITH THE USE OR PERFORMANCE OF THIS SOFTWARE.
  */
  template <class OP1, class OP2, class OP3>
  class BinaryComposeFunctionAdapter :
    public std::binary_function<typename OP2::argument_type,
                                typename OP3::argument_type,
                                typename OP1::result_type>
  {
private:
    OP1 op1_;    // process: op1(op2(x),op3(y))
    OP2 op2_;
    OP3 op3_;
public:
    /// constructor
    BinaryComposeFunctionAdapter(const OP1 & o1, const OP2 & o2, const OP3 & o3) :
      op1_(o1), op2_(o2), op3_(o3)
    {
    }

    /// function call
    typename OP1::result_type
    operator()(const typename OP2::argument_type & x,
               const typename OP3::argument_type & y) const
    {
      return op1_(op2_(x), op3_(y));
    }

  };

  /**
    @brief Convenience function for the @c BinaryComposeFunctionAdapter adapter
  */
  template <class OP1, class OP2, class OP3>
  inline BinaryComposeFunctionAdapter<OP1, OP2, OP3>
  binaryCompose(const OP1 & o1, const OP2 & o2, const OP3 & o3)
  {
    return BinaryComposeFunctionAdapter<OP1, OP2, OP3>(o1, o2, o3);
  }

} // namespace OpenMS

#endif // OPENMS_CONCEPT_BINARYCOMPOSEFUNCTIONADAPTER_H