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/* This file contains code to calculate Kendall's Tau in O(N log N) time in
 * a manner similar to the following reference:
 *
 * A Computer Method for Calculating Kendall's Tau with Ungrouped Data
 * William R. Knight Journal of the American Statistical Association, Vol. 61,
 * No. 314, Part 1 (Jun., 1966), pp. 436-439
 *
 * Copyright (C) 2010 David Simcha
 *
 * License:
 * Boost Software License - Version 1.0 - August 17th, 2003
 *
 * Permission is hereby granted, free of charge, to any person or organization
 * obtaining a copy of the software and accompanying documentation covered by
 * this license (the "Software") to use, reproduce, display, distribute,
 * execute, and transmit the Software, and to prepare derivative works of the
 * Software, and to permit third-parties to whom the Software is furnished to
 * do so, all subject to the following:
 *
 * The copyright notices in the Software and this entire statement, including
 * the above license grant, this restriction and the following disclaimer,
 * must be included in all copies of the Software, in whole or in part, and
 * all derivative works of the Software, unless such copies or derivative
 * works are solely in the form of machine-executable object code generated by
 * a source language processor.
 *
 * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 * IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 * FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT
 * SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE
 * FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE,
 * ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER
 * DEALINGS IN THE SOFTWARE.
 *
 */

#ifndef _KENDALL_
#define _KENDALL_

#include <OTdebug.h>

BEGIN_C_DECLS

/* This function calculates the Kendall Tau B on a pair of C-style "arrays".
 * Note that it will completely overwrite arr1 and sort arr2, so these need
 * to be duplicated before passing them in.
 */
double kendallNlogN(double* arr1, double* arr2, size_t len);

/* This function uses a simple O(N^2) implementation.  It probably has a smaller
 * constant and therefore is useful in the small N case, and is also useful
 * for testing the relatively complex O(N log N) implementation.
 */
double kendallSmallN(double* arr1, double* arr2, size_t len);

END_C_DECLS

#endif /* _COBYLA_ */