This file is indexed.

/usr/lib/petscdir/3.4.2/include/petscmath.h is in libpetsc3.4.2-dev 3.4.2.dfsg1-6.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
/*

      PETSc mathematics include file. Defines certain basic mathematical
    constants and functions for working with single, double, and quad precision
    floating point numbers as well as complex single and double.

    This file is included by petscsys.h and should not be used directly.

*/

#if !defined(__PETSCMATH_H)
#define __PETSCMATH_H
#include <math.h>

/*

     Defines operations that are different for complex and real numbers;
   note that one cannot mix the use of complex and real in the same
   PETSc program. All PETSc objects in one program are built around the object
   PetscScalar which is either always a real or a complex.

*/

#define PetscExpPassiveScalar(a) PetscExpScalar()
#if defined(PETSC_USE_REAL_SINGLE)
#define MPIU_REAL   MPI_FLOAT
typedef float PetscReal;
#define PetscSqrtReal(a)    sqrt(a)
#define PetscExpReal(a)     exp(a)
#define PetscLogReal(a)     log(a)
#define PetscSinReal(a)     sin(a)
#define PetscCosReal(a)     cos(a)
#define PetscPowReal(a,b)   pow(a,b)
#elif defined(PETSC_USE_REAL_DOUBLE)
#define MPIU_REAL   MPI_DOUBLE
typedef double PetscReal;
#define PetscSqrtReal(a)    sqrt(a)
#define PetscExpReal(a)     exp(a)
#define PetscLogReal(a)     log(a)
#define PetscSinReal(a)     sin(a)
#define PetscCosReal(a)     cos(a)
#define PetscPowReal(a,b)   pow(a,b)
#elif defined(PETSC_USE_REAL___FLOAT128)
#if defined(__cplusplus)
extern "C" {
#endif
#include <quadmath.h>
#if defined(__cplusplus)
}
#endif
PETSC_EXTERN MPI_Datatype MPIU___FLOAT128 PetscAttrMPITypeTag(__float128);
#define MPIU_REAL MPIU___FLOAT128
typedef __float128 PetscReal;
#define PetscSqrtReal(a)    sqrtq(a)
#define PetscExpReal(a)     expq(a)
#define PetscLogReal(a)     logq(a)
#define PetscSinReal(a)     sinq(a)
#define PetscCosReal(a)     cosq(a)
#define PetscPowReal(a,b)   powq(a,b)
#endif /* PETSC_USE_REAL_* */

/*
    Complex number definitions
 */
#if defined(PETSC_CLANGUAGE_CXX) && defined(PETSC_HAVE_CXX_COMPLEX)
#if defined(PETSC_USE_COMPLEX) || defined(PETSC_DESIRE_COMPLEX)
#define PETSC_HAVE_COMPLEX 1
/* C++ support of complex number */
#if defined(PETSC_HAVE_CUSP)
#define complexlib cusp
#include <cusp/complex.h>
#else
#define complexlib std
#include <complex>
#endif

#define PetscRealPartComplex(a)      (a).real()
#define PetscImaginaryPartComplex(a) (a).imag()
#define PetscAbsComplex(a)           complexlib::abs(a)
#define PetscConjComplex(a)          complexlib::conj(a)
#define PetscSqrtComplex(a)          complexlib::sqrt(a)
#define PetscPowComplex(a,b)         complexlib::pow(a,b)
#define PetscExpComplex(a)           complexlib::exp(a)
#define PetscLogComplex(a)           complexlib::log(a)
#define PetscSinComplex(a)           complexlib::sin(a)
#define PetscCosComplex(a)           complexlib::cos(a)

#if defined(PETSC_USE_REAL_SINGLE)
typedef complexlib::complex<float> PetscComplex;
#elif defined(PETSC_USE_REAL_DOUBLE)
typedef complexlib::complex<double> PetscComplex;
#elif defined(PETSC_USE_REAL___FLOAT128)
typedef complexlib::complex<__float128> PetscComplex; /* Notstandard and not expected to work, use __complex128 */
#endif  /* PETSC_USE_REAL_ */
#endif  /* PETSC_USE_COMPLEX && PETSC_DESIRE_COMPLEX */

#elif defined(PETSC_CLANGUAGE_C) && defined(PETSC_HAVE_C99_COMPLEX)
/* Use C99 _Complex for the type. Do not include complex.h by default to define "complex" because of symbol conflicts in Hypre. */
/* Compilation units that can safely use complex should define PETSC_DESIRE_COMPLEX before including any headers */
#if defined(PETSC_USE_COMPLEX) || defined(PETSC_DESIRE_COMPLEX)
#define PETSC_HAVE_COMPLEX 1
#include <complex.h>

#if defined(PETSC_USE_REAL_SINGLE)
typedef float _Complex PetscComplex;

#define PetscRealPartComplex(a)      crealf(a)
#define PetscImaginaryPartComplex(a) cimagf(a)
#define PetscAbsComplex(a)           cabsf(a)
#define PetscConjComplex(a)          conjf(a)
#define PetscSqrtComplex(a)          csqrtf(a)
#define PetscPowComplex(a,b)         cpowf(a,b)
#define PetscExpComplex(a)           cexpf(a)
#define PetscLogComplex(a)           clogf(a)
#define PetscSinComplex(a)           csinf(a)
#define PetscCosComplex(a)           ccosf(a)

#elif defined(PETSC_USE_REAL_DOUBLE)
typedef double _Complex PetscComplex;

#define PetscRealPartComplex(a)      creal(a)
#define PetscImaginaryPartComplex(a) cimag(a)
#define PetscAbsComplex(a)           cabs(a)
#define PetscConjComplex(a)          conj(a)
#define PetscSqrtComplex(a)          csqrt(a)
#define PetscPowComplex(a,b)         cpow(a,b)
#define PetscExpComplex(a)           cexp(a)
#define PetscLogComplex(a)           clog(a)
#define PetscSinComplex(a)           csin(a)
#define PetscCosComplex(a)           ccos(a)

#elif defined(PETSC_USE_REAL___FLOAT128)
typedef __complex128 PetscComplex;
PETSC_EXTERN MPI_Datatype MPIU___COMPLEX128 PetscAttrMPITypeTag(__complex128);

#define PetscRealPartComplex(a)      crealq(a)
#define PetscImaginaryPartComplex(a) cimagq(a)
#define PetscAbsComplex(a)           cabsq(a)
#define PetscConjComplex(a)          conjq(a)
#define PetscSqrtComplex(a)          csqrtq(a)
#define PetscPowComplex(a,b)         cpowq(a,b)
#define PetscExpComplex(a)           cexpq(a)
#define PetscLogComplex(a)           clogq(a)
#define PetscSinComplex(a)           csinq(a)
#define PetscCosComplex(a)           ccosq(a)
#endif /* PETSC_USE_REAL_* */
#elif defined(PETSC_USE_COMPLEX)
#error "PETSc was configured --with-scalar-type=complex, but a language-appropriate complex library is not available"
#endif /* PETSC_USE_COMPLEX || PETSC_DESIRE_COMPLEX */
#endif /* (PETSC_CLANGUAGE_CXX && PETSC_HAVE_CXX_COMPLEX) else-if (PETSC_CLANGUAGE_C && PETSC_HAVE_C99_COMPLEX) */

#if defined(PETSC_HAVE_COMPLEX)
#if defined(PETSC_HAVE_MPI_C_DOUBLE_COMPLEX)
#define MPIU_C_DOUBLE_COMPLEX MPI_C_DOUBLE_COMPLEX
#define MPIU_C_COMPLEX MPI_C_COMPLEX
#else
# if defined(PETSC_CLANGUAGE_CXX) && defined(PETSC_HAVE_CXX_COMPLEX)
  typedef complexlib::complex<double> petsc_mpiu_c_double_complex;
  typedef complexlib::complex<float> petsc_mpiu_c_complex;
# elif defined(PETSC_CLANGUAGE_C) && defined(PETSC_HAVE_C99_COMPLEX)
  typedef double _Complex petsc_mpiu_c_double_complex;
  typedef float _Complex petsc_mpiu_c_complex;
# else
  typedef struct {double real,imag;} petsc_mpiu_c_double_complex;
  typedef struct {float real,imag;} petsc_mpiu_c_complex;
# endif
PETSC_EXTERN MPI_Datatype MPIU_C_DOUBLE_COMPLEX PetscAttrMPITypeTagLayoutCompatible(petsc_mpiu_c_double_complex);
PETSC_EXTERN MPI_Datatype MPIU_C_COMPLEX PetscAttrMPITypeTagLayoutCompatible(petsc_mpiu_c_complex);
#endif /* PETSC_HAVE_MPI_C_DOUBLE_COMPLEX */
#endif /* PETSC_HAVE_COMPLEX */

#if defined(PETSC_HAVE_COMPLEX)
#  if defined(PETSC_USE_REAL_SINGLE)
#    define MPIU_COMPLEX MPIU_C_COMPLEX
#  elif defined(PETSC_USE_REAL_DOUBLE)
#    define MPIU_COMPLEX MPIU_C_DOUBLE_COMPLEX
#  elif defined(PETSC_USE_REAL___FLOAT128)
#    define MPIU_COMPLEX MPIU___COMPLEX128
#  endif /* PETSC_USE_REAL_* */
#endif

#if defined(PETSC_USE_COMPLEX)
typedef PetscComplex PetscScalar;
#define PetscRealPart(a)      PetscRealPartComplex(a)
#define PetscImaginaryPart(a) PetscImaginaryPartComplex(a)
#define PetscAbsScalar(a)     PetscAbsComplex(a)
#define PetscConj(a)          PetscConjComplex(a)
#define PetscSqrtScalar(a)    PetscSqrtComplex(a)
#define PetscPowScalar(a,b)   PetscPowComplex(a,b)
#define PetscExpScalar(a)     PetscExpComplex(a)
#define PetscLogScalar(a)     PetscLogComplex(a)
#define PetscSinScalar(a)     PetscSinComplex(a)
#define PetscCosScalar(a)     PetscCosComplex(a)

#define MPIU_SCALAR MPIU_COMPLEX

/*
    real number definitions
 */
#else /* PETSC_USE_COMPLEX */
typedef PetscReal PetscScalar;
#define MPIU_SCALAR MPIU_REAL

#define PetscRealPart(a)      (a)
#define PetscImaginaryPart(a) ((PetscReal)0.)
PETSC_STATIC_INLINE PetscReal PetscAbsScalar(PetscScalar a) {return a < 0.0 ? -a : a;}
#define PetscConj(a)          (a)
#if !defined(PETSC_USE_REAL___FLOAT128)
#define PetscSqrtScalar(a)    sqrt(a)
#define PetscPowScalar(a,b)   pow(a,b)
#define PetscExpScalar(a)     exp(a)
#define PetscLogScalar(a)     log(a)
#define PetscSinScalar(a)     sin(a)
#define PetscCosScalar(a)     cos(a)
#else /* PETSC_USE_REAL___FLOAT128 */
#define PetscSqrtScalar(a)    sqrtq(a)
#define PetscPowScalar(a,b)   powq(a,b)
#define PetscExpScalar(a)     expq(a)
#define PetscLogScalar(a)     logq(a)
#define PetscSinScalar(a)     sinq(a)
#define PetscCosScalar(a)     cosq(a)
#endif /* PETSC_USE_REAL___FLOAT128 */

#endif /* PETSC_USE_COMPLEX */

#define PetscSign(a) (((a) >= 0) ? ((a) == 0 ? 0 : 1) : -1)
#define PetscAbs(a)  (((a) >= 0) ? (a) : -(a))

/* --------------------------------------------------------------------------*/

/*
   Certain objects may be created using either single or double precision.
   This is currently not used.
*/
typedef enum { PETSC_SCALAR_DOUBLE,PETSC_SCALAR_SINGLE, PETSC_SCALAR_LONG_DOUBLE } PetscScalarPrecision;

#if defined(PETSC_HAVE_COMPLEX)
/* PETSC_i is the imaginary number, i */
PETSC_EXTERN PetscComplex PETSC_i;
#endif

/*MC
   PetscMin - Returns minimum of two numbers

   Synopsis:
   #include "petscmath.h"
   type PetscMin(type v1,type v2)

   Not Collective

   Input Parameter:
+  v1 - first value to find minimum of
-  v2 - second value to find minimum of


   Notes: type can be integer or floating point value

   Level: beginner


.seealso: PetscMin(), PetscClipInterval(), PetscAbsInt(), PetscAbsReal(), PetscSqr()

M*/
#define PetscMin(a,b)   (((a)<(b)) ?  (a) : (b))

/*MC
   PetscMax - Returns maxium of two numbers

   Synopsis:
   #include "petscmath.h"
   type max PetscMax(type v1,type v2)

   Not Collective

   Input Parameter:
+  v1 - first value to find maximum of
-  v2 - second value to find maximum of

   Notes: type can be integer or floating point value

   Level: beginner

.seealso: PetscMin(), PetscClipInterval(), PetscAbsInt(), PetscAbsReal(), PetscSqr()

M*/
#define PetscMax(a,b)   (((a)<(b)) ?  (b) : (a))

/*MC
   PetscClipInterval - Returns a number clipped to be within an interval

   Synopsis:
   #include "petscmath.h"
   type clip PetscClipInterval(type x,type a,type b)

   Not Collective

   Input Parameter:
+  x - value to use if within interval (a,b)
.  a - lower end of interval
-  b - upper end of interval

   Notes: type can be integer or floating point value

   Level: beginner

.seealso: PetscMin(), PetscMax(), PetscAbsInt(), PetscAbsReal(), PetscSqr()

M*/
#define PetscClipInterval(x,a,b)   (PetscMax((a),PetscMin((x),(b))))

/*MC
   PetscAbsInt - Returns the absolute value of an integer

   Synopsis:
   #include "petscmath.h"
   int abs PetscAbsInt(int v1)

   Not Collective

   Input Parameter:
.   v1 - the integer

   Level: beginner

.seealso: PetscMax(), PetscMin(), PetscAbsReal(), PetscSqr()

M*/
#define PetscAbsInt(a)  (((a)<0)   ? -(a) : (a))

/*MC
   PetscAbsReal - Returns the absolute value of an real number

   Synopsis:
   #include "petscmath.h"
   Real abs PetscAbsReal(PetscReal v1)

   Not Collective

   Input Parameter:
.   v1 - the double


   Level: beginner

.seealso: PetscMax(), PetscMin(), PetscAbsInt(), PetscSqr()

M*/
#define PetscAbsReal(a) (((a)<0)   ? -(a) : (a))

/*MC
   PetscSqr - Returns the square of a number

   Synopsis:
   #include "petscmath.h"
   type sqr PetscSqr(type v1)

   Not Collective

   Input Parameter:
.   v1 - the value

   Notes: type can be integer or floating point value

   Level: beginner

.seealso: PetscMax(), PetscMin(), PetscAbsInt(), PetscAbsReal()

M*/
#define PetscSqr(a)     ((a)*(a))

/* ----------------------------------------------------------------------------*/
/*
     Basic constants
*/
#if defined(PETSC_USE_REAL___FLOAT128)
#define PETSC_PI                 M_PIq
#elif defined(M_PI)
#define PETSC_PI                 M_PI
#else
#define PETSC_PI                 3.14159265358979323846264338327950288419716939937510582
#endif

#if !defined(PETSC_USE_64BIT_INDICES)
#define PETSC_MAX_INT            2147483647
#define PETSC_MIN_INT            (-PETSC_MAX_INT - 1)
#else
#define PETSC_MAX_INT            9223372036854775807L
#define PETSC_MIN_INT            (-PETSC_MAX_INT - 1)
#endif

#if defined(PETSC_USE_REAL_SINGLE)
#  define PETSC_MAX_REAL                3.40282346638528860e+38F
#  define PETSC_MIN_REAL                -PETSC_MAX_REAL
#  define PETSC_MACHINE_EPSILON         1.19209290e-07F
#  define PETSC_SQRT_MACHINE_EPSILON    3.45266983e-04F
#  define PETSC_SMALL                   1.e-5
#elif defined(PETSC_USE_REAL_DOUBLE)
#  define PETSC_MAX_REAL                1.7976931348623157e+308
#  define PETSC_MIN_REAL                -PETSC_MAX_REAL
#  define PETSC_MACHINE_EPSILON         2.2204460492503131e-16
#  define PETSC_SQRT_MACHINE_EPSILON    1.490116119384766e-08
#  define PETSC_SMALL                   1.e-10
#elif defined(PETSC_USE_REAL___FLOAT128)
#  define PETSC_MAX_REAL                FLT128_MAX
#  define PETSC_MIN_REAL                -FLT128_MAX
#  define PETSC_MACHINE_EPSILON         FLT128_EPSILON
#  define PETSC_SQRT_MACHINE_EPSILON    1.38777878078e-17
#  define PETSC_SMALL                   1.e-20
#endif

PETSC_EXTERN PetscErrorCode PetscIsInfOrNanScalar(PetscScalar);
PETSC_EXTERN PetscErrorCode PetscIsInfOrNanReal(PetscReal);

/* ----------------------------------------------------------------------------*/
#define PassiveReal   PetscReal
#define PassiveScalar PetscScalar

/*
    These macros are currently hardwired to match the regular data types, so there is no support for a different
    MatScalar from PetscScalar. We left the MatScalar in the source just in case we use it again.
 */
#define MPIU_MATSCALAR MPIU_SCALAR
typedef PetscScalar MatScalar;
typedef PetscReal MatReal;

struct petsc_mpiu_2scalar {PetscScalar a,b;};
PETSC_EXTERN MPI_Datatype MPIU_2SCALAR PetscAttrMPITypeTagLayoutCompatible(struct petsc_mpiu_2scalar);
#if defined(PETSC_USE_64BIT_INDICES) || !defined(MPI_2INT)
struct petsc_mpiu_2int {PetscInt a,b;};
PETSC_EXTERN MPI_Datatype MPIU_2INT PetscAttrMPITypeTagLayoutCompatible(struct petsc_mpiu_2int);
#else
#define MPIU_2INT MPI_2INT
#endif

PETSC_STATIC_INLINE PetscInt PetscPowInt(PetscInt base,PetscInt power) {
  PetscInt result = 1;
  while (power) {
    if (power & 1) result *= base;
    power >>= 1;
    base *= base;
  }
  return result;
}
PETSC_STATIC_INLINE PetscReal PetscPowRealInt(PetscReal base,PetscInt power) {
  PetscReal result = 1;
  while (power) {
    if (power & 1) result *= base;
    power >>= 1;
    base *= base;
  }
  return result;
}

#endif