This file is indexed.

/usr/lib/python2.7/dist-packages/PyMca/PyMcaPostBatch.py is in pymca 4.7.1+dfsg-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
#!/usr/bin/env python
#/*##########################################################################
# Copyright (C) 2004-2012 European Synchrotron Radiation Facility
#
# This file is part of the PyMca X-ray Fluorescence Toolkit developed at
# the ESRF by the Software group.
#
# This toolkit is free software; you can redistribute it and/or modify it
# under the terms of the GNU General Public License as published by the Free
# Software Foundation; either version 2 of the License, or (at your option)
# any later version.
#
# PyMca is distributed in the hope that it will be useful, but WITHOUT ANY
# WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE.  See the GNU General Public License for more
# details.
#
# You should have received a copy of the GNU General Public License along with
# PyMca; if not, write to the Free Software Foundation, Inc.,
# 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
#
# PyMca follows the dual licensing model of Riverbank's PyQt and cannot be
# used as a free plugin for a non-free program.
#
# Please contact the ESRF industrial unit (industry@esrf.fr) if this license
# is a problem for you.
#############################################################################*/
__author__ = "V.A. Sole - ESRF Software Group"
import sys
import os
from PyMca import PyMcaDirs
from PyMca import RGBCorrelator
from PyMca import PyMcaQt as qt
if hasattr(qt, "QString"):
    QString = qt.QString
    QStringList = qt.QStringList
else:
    QString = qt.safe_str
    QStringList = list
QTVERSION = qt.qVersion()

class PyMcaPostBatch(RGBCorrelator.RGBCorrelator):
    def addBatchDatFile(self, filename, ignoresigma=None):
        #test if filename is an EDF ...
        #this is a more complete test
        #but it would rewire to import too many things
        #import QDataSource
        #sourceType = QDataSource.getSourceType(filename)
        #if sourceType.upper().startswith("EDFFILE"):
        #    return self.addFileList([filename])
        f = open(filename, 'rb')
        twoBytes = f.read(2)
        f.close()
        if sys.version < '3.0':
            twoChar = twoBytes
        else:
            try:
                twoChar = twoBytes.decode('utf-8')
            except:
                twoChar = "__dummy__"
        if twoChar in ["II", "MM", "\n{"] or\
           twoChar[0] in ["{"] or\
           filename.lower().endswith('cbf')or\
           (filename.lower().endswith('spe') and twoChar[0] not in ['$']):
            #very likely wrapped as EDF
            return self.addFileList([filename])
        
        text = qt.safe_str(self.windowTitle())
        text += ": " + qt.safe_str(os.path.basename(filename))

        self.setWindowTitle(text)

        if len(filename) > 4:
            if filename[-4:] == ".csv":
                csv = True
            else:
                csv = False
        self.controller.addBatchDatFile(filename, ignoresigma, csv=csv)

    def addFileList(self, filelist):
        """
        Expected to work just with EDF files
        """
        text = qt.safe_str(self.windowTitle())
        if len(filelist) == 1:
            text += ": " + qt.safe_str(os.path.basename(filelist[0]))
        else:
            text += ": from " + qt.safe_str(os.path.basename(filelist[0])) + \
                    " to " + qt.safe_str(os.path.basename(filelist[-1]))
        self.setWindowTitle(text)

        self.controller.addFileList(filelist)

    def _getStackOfFiles(self):
        wdir = PyMcaDirs.inputDir
        fileTypeList = ["Batch Result Files (*dat)",
                        "EDF Files (*edf)",
                        "EDF Files (*ccd)",
                        "TIFF Files (*tif *tiff *TIF *TIFF)",
                        "Image Files (* jpg *jpeg *tif *tiff *png)",
                        "All Files (*)"]
        message = "Open ONE Batch result file or SEVERAL EDF files"
        #if (QTVERSION < '4.3.0') and (sys.platform != 'darwin'):
        if PyMcaDirs.nativeFileDialogs:
            filetypes = ""
            for filetype in fileTypeList:
                filetypes += filetype+"\n"
            filelist = qt.QFileDialog.getOpenFileNames(self,
                        message,
                        wdir,
                        filetypes)
            if not len(filelist):return []
        else:
            fdialog = qt.QFileDialog(self)
            fdialog.setModal(True)
            fdialog.setWindowTitle(message)
            strlist = QStringList()
            for filetype in fileTypeList:
                strlist.append(filetype.replace("(","").replace(")",""))
            fdialog.setFilters(strlist)
            fdialog.setFileMode(fdialog.ExistingFiles)
            fdialog.setDirectory(wdir)
            ret = fdialog.exec_()
            if ret == qt.QDialog.Accepted:
                filelist = fdialog.selectedFiles()
                fdialog.close()
                del fdialog                        
            else:
                fdialog.close()
                del fdialog
                return []
        filelist = [qt.safe_str(x) for x in filelist]
        if not len(filelist):
            return []
        PyMcaDirs.inputDir = os.path.dirname(filelist[0])
        filelist.sort()
        return filelist

def test():
    app = qt.QApplication([])
    qt.QObject.connect(app,
                       qt.SIGNAL("lastWindowClosed()"),
                       app,
                       qt.SLOT('quit()'))

    import getopt
    options=''
    longoptions=["nativefiledialogs=","transpose=", "fileindex="]
    opts, args = getopt.getopt(
                    sys.argv[1:],
                    options,
                    longoptions)      
    transpose=False
    for opt,arg in opts:
        if opt in '--nativefiledialogs':
            if int(arg):
                PyMcaDirs.nativeFileDialogs=True
            else:
                PyMcaDirs.nativeFileDialogs=False
        elif opt in '--transpose':
            if int(arg):
                transpose=True
        elif opt in '--fileindex':
            if int(arg):
                transpose=True
    filelist=args
    w = PyMcaPostBatch()
    w.layout().setMargin(11)
    if not len(filelist):
        filelist = w._getStackOfFiles()
    if not len(filelist):
        print("Usage:")
        print("python PyMcaPostBatch.py PyMCA_BATCH_RESULT_DOT_DAT_FILE")
        sys.exit(app.quit())        
    if len(filelist) == 1:
        if filelist[0].lower().endswith("dat"):
            try:
                w.addBatchDatFile(filelist[0])
            except ValueError:
                w.addFileList(filelist)
        else:
            w.addFileList(filelist)
    else:
        w.addFileList(filelist)
    if transpose:
        w.transposeImages()
    w.show()
    app.exec_()

if __name__ == "__main__":
    test()