/usr/lib/R/site-library/lme4/INDEX is in r-cran-lme4 1.0-6-2.
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GHrule Univariate Gauss-Hermite quadrature rule
GQN Sparse Gauss-Hermite quadrature grids
GQdk Sparse Gaussian Quadrature grid
InstEval University Lecture/Instructor Evaluations by
Students at ETH
NelderMead Generator object for the Nelder-Mead optimizer
class.
NelderMead-class Class '"NelderMead"'
Pastes Paste strength by batch and cask
Penicillin Variation in penicillin testing
VarCorr Extract Variance and Correlation Components
VerbAgg Verbal Aggression item responses
bootMer Model-based (Semi-)Parametric Bootstrap for
Mixed Models
cake Breakage angle of chocolate cakes
cbpp Contagious bovine pleuropneumonia
confint.merMod Compute confidence intervals on the parameters
of an lme4 fit
densityplot.thpr densityplot from a mixed-effects profile
devcomp Extract the deviance component list
findbars Determine random-effects expressions from a
formula
fixef Extract fixed-effects estimates
fortify add information to data based on a fitted model
getME Extract or Get Generalized Components from a
Fitted Mixed Effects Model
glmFamily Generator object for the 'glmFamily' class
glmFamily-class Class '"glmFamily"' - a reference class for
'family'
glmer Fit Generalized Linear Mixed-Effects Models
glmer.nb glmer() for Negative Binomial
golden Generator object for the golden search
optimizer class.
golden-class Class '"golden"'
grouseticks Data on red grouse ticks from Elston et al.
2001
isNested Is f1 nested within f2?
isREML Check characteristics of models
lmList List of lm Objects with a Common Model
lmList-class Class "lmList" of 'lm' Objects on Common Model
lmResp Generator objects for the response classes
lmResp-class Classes '"lmResp"', '"glmResp"', '"nlsResp"'
and '"lmerResp"'
lme4-package Linear, generalized linear, and nonlinear mixed
models
lmer Fit Linear Mixed-Effects Models
lmerControl Control of Mixed Model Fitting
merMod-class Class "merMod" of Fitted Mixed-Effect Models
merPredD Generator object for the 'merPredD' class
merPredD-class Class '"merPredD"' - a dense predictor
reference class
mkMerMod Create a merMod object
mkReTrms Create Z, Lambda, Lind, etc.
mkRespMod Create an lmerResp, glmResp or nlsResp instance
mkVarCorr Make Variance and Correlation Matrices from
'theta'
mkdevfun Create a deviance evaluation function from a
predictor and a response module
modular Modular functions for mixed model fits
nlformula Manipulate a nonlinear model formula.
nlmer Fit Nonlinear Mixed-Effects Models
nobars Omit terms separated by vertical bars in a
formula
plot.merMod diagnostic plots for merMod fits
predict.merMod Predictions from a model at new data values
profile-methods Profile method for merMod objects
pvalues Getting p-values for fitted models
ranef Extract the modes of the random effects
rePos Generator object for the rePos (random-effects
positions) class
rePos-class Class '"rePos"'
refit Refit a model with a new response, by maximum
likelihood criterion
refitML Refit a model by maximum likelihood criterion
residuals.merMod residuals of merMod objects
sigma Extract residual standard error
simulate.merMod Simulate responses from a 'merMod' object
sleepstudy Reaction times in a sleep deprivation study
splom.thpr Profile pairs plot
subbars "Sub[stitute] Bars"
varianceProf Transform to the variance scale
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