/usr/share/biomaj/sql/hsql.sql is in biomaj 1.2.3-6build1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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-- Table remoteInfo
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='REMOTEINFO';
* if (*present == 0)
CREATE TABLE remoteInfo (
idremoteInfo INT GENERATED BY DEFAULT AS IDENTITY,
protocol VARCHAR(45) NULL ,
port INT NULL ,
dbName VARCHAR(45) NULL ,
dbFullname VARCHAR(512) NULL ,
dbType VARCHAR(128) NULL ,
server VARCHAR(256) NULL ,
remoteDir VARCHAR(256) NULL ,
PRIMARY KEY (idremoteInfo) );
* end if
-- -----------------------------------------------------
-- Table localInfo
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='LOCALINFO';
* if (*present == 0)
CREATE TABLE localInfo (
idlocalInfo INT GENERATED BY DEFAULT AS IDENTITY,
offlineDirectory VARCHAR(256) NULL ,
versionDirectory VARCHAR(256) NULL ,
frequency INT NULL ,
dolinkcopy BOOLEAN NULL ,
logfile BOOLEAN NULL ,
releaseFile VARCHAR(45) NULL ,
releaseRegexp VARCHAR(128) NULL ,
remoteFiles VARCHAR(128) NULL ,
remoteExcludedFiles VARCHAR(128) NULL ,
localFiles VARCHAR(128) NULL ,
nversions INT NULL ,
PRIMARY KEY (idlocalInfo) );
* end if
-- -----------------------------------------------------
-- Table bank
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='BANK';
* if (*present == 0)
CREATE TABLE bank (
idbank INT GENERATED BY DEFAULT AS IDENTITY,
name VARCHAR(45) NULL,
CONSTRAINT uniqueBankName UNIQUE (name),
PRIMARY KEY (idbank));
* end if
-- -----------------------------------------------------
-- Table configuration
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='CONFIGURATION';
* if (*present == 0)
CREATE TABLE configuration (
idconfiguration BIGINT,
ref_idremoteInfo INT NOT NULL ,
ref_idlocalInfo INT NOT NULL ,
ref_idbank INT NOT NULL ,
date DATETIME NULL ,
file VARCHAR(256) NULL ,
PRIMARY KEY (idconfiguration) ,
CONSTRAINT fk_configuration_remoteInfo1
FOREIGN KEY (ref_idremoteInfo )
REFERENCES remoteInfo (idremoteInfo )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_configuration_localInfo1
FOREIGN KEY (ref_idlocalInfo )
REFERENCES localInfo (idlocalInfo )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_configuration_bank1
FOREIGN KEY (ref_idbank )
REFERENCES bank (idbank )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table updateBank
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='UPDATEBANK';
* if (*present == 0)
CREATE TABLE updateBank (
idupdateBank INT GENERATED BY DEFAULT AS IDENTITY,
ref_idconfiguration BIGINT NOT NULL ,
updateRelease VARCHAR(45) NULL ,
productionDirectoryPath VARCHAR(256) NULL ,
productionDirectoryDeployed BOOLEAN NULL ,
sizeDownload VARCHAR(45) NULL ,
sizeRelease VARCHAR(45) NULL ,
startTime DATETIME NULL ,
endTime DATETIME NULL ,
elapsedTime VARCHAR(45) NULL ,
isUpdated BOOLEAN NULL ,
nbSessions INT NULL ,
idLastSession BIGINT NULL ,
PRIMARY KEY (idupdateBank) ,
CONSTRAINT fk_updateBank_configuration1
FOREIGN KEY (ref_idconfiguration )
REFERENCES configuration (idconfiguration )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table sessionTask
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='SESSIONTASK';
* if (*present == 0)
CREATE TABLE sessionTask (
idsessionTask INT GENERATED BY DEFAULT AS IDENTITY,
startTime DATETIME NULL ,
endTime DATETIME NULL ,
elapsedTime VARCHAR(45) NULL ,
status VARCHAR(45) NULL ,
value VARCHAR(128) NULL ,
nbExtract INT NULL ,
nbLocalOnlineFiles INT NULL ,
nbLocalOfflineFiles INT NULL ,
nbDownloadFiles INT NULL ,
bandwidth FLOAT NULL ,
nbFilesMoved INT NULL ,
nbFilesCopied INT NULL ,
taskType VARCHAR(45) NULL ,
nbreMetaProcess INT NULL ,
PRIMARY KEY (idsessionTask) );
* end if
-- -----------------------------------------------------
-- Table session
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='SESSION';
* if (*present == 0)
CREATE TABLE session (
idsession BIGINT NOT NULL ,
ref_idupdateBank INT NOT NULL ,
href VARCHAR(256) NULL ,
parse VARCHAR(45) NULL ,
status BOOLEAN NULL ,
startTime DATETIME NULL ,
endTime DATETIME NULL ,
elapsedTime VARCHAR(45) NULL ,
logfile VARCHAR(128) NULL ,
PRIMARY KEY (idsession) ,
CONSTRAINT fk_session_updateBank1
FOREIGN KEY (ref_idupdateBank )
REFERENCES updateBank (idupdateBank )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table metaprocess
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='METAPROCESS';
* if (*present == 0)
CREATE TABLE metaprocess (
idmetaprocess VARCHAR(45) NOT NULL,
name VARCHAR(45) NULL ,
startTime DATETIME NULL ,
endTime DATETIME NULL ,
elapsedTime VARCHAR(45) NULL ,
status VARCHAR(45) NULL ,
logfile VARCHAR(256) NULL ,
block VARCHAR(45) NULL ,
ref_idsessionTask INT NOT NULL ,
PRIMARY KEY (idmetaprocess) ,
CONSTRAINT fk_metaprocess_sessionTask1
FOREIGN KEY (ref_idsessionTask )
REFERENCES sessionTask (idsessionTask )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table process
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='PROCESS';
* if (*present == 0)
CREATE TABLE process (
idprocess INT GENERATED BY DEFAULT AS IDENTITY,
name VARCHAR(45) NULL ,
keyname VARCHAR(45) NULL ,
exe VARCHAR(128) NULL ,
args VARCHAR(128) NULL ,
description VARCHAR(512) NULL ,
type VARCHAR(45) NULL ,
startTime DATETIME NULL ,
endTime DATETIME NULL ,
elapsedTime VARCHAR(45) NULL ,
biomaj_error BOOLEAN NULL ,
timestamp BIGINT NULL ,
value VARCHAR(45) NULL ,
ref_idmetaprocess VARCHAR(45) NOT NULL ,
PRIMARY KEY (idprocess) ,
CONSTRAINT fk_process_metaprocess1
FOREIGN KEY (ref_idmetaprocess )
REFERENCES metaprocess (idmetaprocess )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table file
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='FILE';
* if (*present == 0)
CREATE TABLE file (
idfile INT GENERATED BY DEFAULT AS IDENTITY ,
location VARCHAR(512) NULL ,
size BIGINT NULL ,
time BIGINT NULL ,
link BOOLEAN NULL ,
is_extract BOOLEAN NULL ,
volatile BOOLEAN NULL ,
refHash VARCHAR(45) NULL ,
fileType VARCHAR(45) NULL ,
ref_idprocess INT NULL ,
PRIMARY KEY (idfile) ,
CONSTRAINT fk_file_process1
FOREIGN KEY (ref_idprocess )
REFERENCES process (idprocess )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table productionDirectory
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='PRODUCTIONDIRECTORY';
* if (*present == 0)
CREATE TABLE productionDirectory (
idproductionDirectory INT GENERATED BY DEFAULT AS IDENTITY,
remove DATETIME NULL ,
creation DATETIME NULL ,
size VARCHAR(45) NULL ,
state VARCHAR(45) NULL ,
session BIGINT NULL ,
path VARCHAR(256) NULL ,
ref_idbank INT NOT NULL ,
PRIMARY KEY (idproductionDirectory) ,
CONSTRAINT fk_productionDirectory_bank1
FOREIGN KEY (ref_idbank )
REFERENCES bank (idbank )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table message
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='MESSAGE';
* if (*present == 0)
CREATE TABLE message (
idmessage INT GENERATED BY DEFAULT AS IDENTITY,
message VARCHAR(512) NULL ,
type VARCHAR(45) NULL ,
PRIMARY KEY (idmessage) );
* end if
-- -----------------------------------------------------
-- Table session_has_message
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='SESSION_HAS_MESSAGE';
* if (*present == 0)
CREATE TABLE session_has_message (
idsession_has_message INT GENERATED BY DEFAULT AS IDENTITY,
ref_idsession BIGINT NOT NULL ,
ref_idmessage INT NOT NULL ,
PRIMARY KEY (idsession_has_message) ,
CONSTRAINT fk_session_has_message_session1
FOREIGN KEY (ref_idsession )
REFERENCES session (idsession )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_session_has_message_message1
FOREIGN KEY (ref_idmessage )
REFERENCES message (idmessage )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table sessionTask_has_message
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='SESSIONTASK_HAS_MESSAGE';
* if (*present == 0)
CREATE TABLE sessionTask_has_message (
idsessionTask_has_message INT GENERATED BY DEFAULT AS IDENTITY,
ref_idsessionTask INT NOT NULL ,
ref_idmessage INT NOT NULL ,
PRIMARY KEY (idsessionTask_has_message) ,
CONSTRAINT fk_sessionTask_has_message_sessionTask1
FOREIGN KEY (ref_idsessionTask )
REFERENCES sessionTask (idsessionTask )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_sessionTask_has_message_message1
FOREIGN KEY (ref_idmessage )
REFERENCES message (idmessage )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table metaprocess_has_message
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='METAPROCESS_HAS_MESSAGE';
* if (*present == 0)
CREATE TABLE metaprocess_has_message (
idmetaprocess_has_message INT GENERATED BY DEFAULT AS IDENTITY,
ref_idmetaprocess VARCHAR(45) NOT NULL ,
ref_idmessage INT NOT NULL ,
PRIMARY KEY (idmetaprocess_has_message) ,
CONSTRAINT fk_metaprocess_has_message_metaprocess1
FOREIGN KEY (ref_idmetaprocess )
REFERENCES metaprocess (idmetaprocess )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_metaprocess_has_message_message1
FOREIGN KEY (ref_idmessage )
REFERENCES message (idmessage )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table process_has_message
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='PROCESS_HAS_MESSAGE';
* if (*present == 0)
CREATE TABLE process_has_message (
idprocess_has_message INT GENERATED BY DEFAULT AS IDENTITY,
ref_idprocess INT NOT NULL ,
ref_idmessage INT NOT NULL ,
PRIMARY KEY (idprocess_has_message) ,
CONSTRAINT fk_process_has_message_process1
FOREIGN KEY (ref_idprocess )
REFERENCES process (idprocess )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_process_has_message_message1
FOREIGN KEY (ref_idmessage )
REFERENCES message (idmessage )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table session_has_sessionTask
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='SESSION_HAS_SESSIONTASK';
* if (*present == 0)
CREATE TABLE session_has_sessionTask (
idsession_has_sessionTask INT GENERATED BY DEFAULT AS IDENTITY,
ref_idsession BIGINT NOT NULL ,
ref_idsessionTask INT NOT NULL ,
PRIMARY KEY (idsession_has_sessionTask) ,
CONSTRAINT fk_session_has_sessionTask_session1
FOREIGN KEY (ref_idsession )
REFERENCES session (idsession )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_session_has_sessionTask_sessionTask1
FOREIGN KEY (ref_idsessionTask )
REFERENCES sessionTask (idsessionTask )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
-- -----------------------------------------------------
-- Table sessionTask_has_file
-- -----------------------------------------------------
* present ~
SELECT count(*) FROM information_schema.system_tables
WHERE table_schem='PUBLIC' AND table_name='SESSIONTASK_HAS_FILE';
* if (*present == 0)
CREATE TABLE sessionTask_has_file (
idsessionTask_has_file INT GENERATED BY DEFAULT AS IDENTITY,
ref_idsessionTask INT NOT NULL ,
ref_idfile INT NOT NULL ,
PRIMARY KEY (idsessionTask_has_file) ,
CONSTRAINT fk_sessionTask_has_file_sessionTask1
FOREIGN KEY (ref_idsessionTask )
REFERENCES sessionTask (idsessionTask )
ON DELETE CASCADE
ON UPDATE NO ACTION,
CONSTRAINT fk_sessionTask_has_file_file1
FOREIGN KEY (ref_idfile )
REFERENCES file (idfile )
ON DELETE CASCADE
ON UPDATE NO ACTION);
* end if
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