/usr/lib/python2.7/dist-packages/screed/fqdbm.py is in python-screed 0.9-2.
This file is owned by root:root, with mode 0o644.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 | #!/usr/bin/env python
# Copyright (c) 2008-2010, Michigan State University
from __future__ import absolute_import
import sys
from screed import read_fastq_sequences
from screed import DBConstants
# A shell interface to the screed FQDBM database writing function
if __name__ == "__main__":
# Make sure the user entered the command line arguments correctly
if len(sys.argv) != 2:
sys.stderr.write("ERROR: USAGE IS: %s <dbfilename>\n" % sys.argv[0])
exit(1)
filename = sys.argv[1]
read_fastq_sequences(filename)
print("Database saved in %s%s" % (sys.argv[1], DBConstants.fileExtension))
exit(0)
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