This package is 1006.6 KB.
It is available at http://archive.ubuntu.com/ubuntu/pool/universe/r/r-bioc-genomicfeatures/r-bioc-genomicfeatures_1.22.4-1_all.deb
.
View its full control file here:
debian/control.
GNU R tools for making and manipulating transcript centric annotations
This package depends on:
r-base-core (>= 3.2.3-1), r-api-3, r-cran-rsqlite, r-bioc-biomart (>= 2.24.0), r-bioc-rtracklayer (>= 1.28.0).
This package does not recommend any other package.
This package does not suggest any other package.
This package does not conflict with any other package.
r-bioc-genomicfeatures 1.22.4-1 is in ubuntu - xenial / universe. This package's architecture is: architectureless.
| File | Mime Type | Owner | Mode | Size |
|---|---|---|---|---|
/usr/
|
root:root | 0o755 | ||
/usr/lib/
|
root:root | 0o755 | ||
/usr/lib/R/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/CITATION
|
text/plain | root:root | 0o644 | 940 bytes |
/usr/lib/R/site-library/GenomicFeatures/DESCRIPTION
|
text/plain | root:root | 0o644 | 2.7 KB |
/usr/lib/R/site-library/GenomicFeatures/doc/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/doc/GenomicFeatures.pdf
|
application/pdf | root:root | 0o644 | 180.5 KB |
/usr/lib/R/site-library/GenomicFeatures/doc/GenomicFeatures.Rnw
|
text/x-tex | root:root | 0o644 | 17.8 KB |
/usr/lib/R/site-library/GenomicFeatures/doc/index.html
|
text/html | root:root | 0o644 | 1.3 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/extdata/Biomart_Ensembl_sample.sqlite
|
application/x-sqlite3 | root:root | 0o644 | 18.0 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/cD.exByEdge-SG-Vig.Rda
|
application/gzip | root:root | 0o644 | 58.6 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/cD.exsByGenes-SG-Vig.Rda
|
application/gzip | root:root | 0o644 | 99.1 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/events.Rda
|
application/gzip | root:root | 0o644 | 1.2 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/FeatureDb.sqlite
|
application/x-sqlite3 | root:root | 0o644 | 34.0 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/a.gff3
|
text/x-c | root:root | 0o644 | 646.1 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/a.sqlite
|
application/x-sqlite3 | root:root | 0o644 | 242.0 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/dmel-1000-r5.11.filtered.gff
|
text/plain | root:root | 0o644 | 55.1 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/dmel-1000-r5.11.filtered.sqlite
|
application/x-sqlite3 | root:root | 0o644 | 44.0 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/NC_011025.gff
|
text/plain | root:root | 0o644 | 256.9 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/TheCanonicalGene_v1.gff3
|
text/plain | root:root | 0o644 | 1.7 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GFF3_files/TheCanonicalGene_v2.gff3
|
text/plain | root:root | 0o644 | 1.4 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GTF_files/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/extdata/GTF_files/Aedes_aegypti.partial.gtf
|
text/plain | root:root | 0o644 | 150.9 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GTF_files/Aedes_aegypti.partial.sqlite
|
application/x-sqlite3 | root:root | 0o644 | 65.0 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/GTF_files/test1.gtf
|
text/plain | root:root | 0o644 | 800 bytes |
/usr/lib/R/site-library/GenomicFeatures/extdata/hg19_knownGene_sample.rda
|
application/gzip | root:root | 0o644 | 12.9 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/hg19_knownGene_sample.sqlite
|
application/x-sqlite3 | root:root | 0o644 | 109.0 KB |
/usr/lib/R/site-library/GenomicFeatures/extdata/hg19_knownToLocusLink_sample.rda
|
application/gzip | root:root | 0o644 | 1.9 KB |
/usr/lib/R/site-library/GenomicFeatures/help/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/help/aliases.rds
|
application/gzip | root:root | 0o644 | 1.1 KB |
/usr/lib/R/site-library/GenomicFeatures/help/AnIndex
|
text/plain | root:root | 0o644 | 4.6 KB |
/usr/lib/R/site-library/GenomicFeatures/help/GenomicFeatures.rdb
|
application/octet-stream | root:root | 0o644 | 156.6 KB |
/usr/lib/R/site-library/GenomicFeatures/help/GenomicFeatures.rdx
|
application/gzip | root:root | 0o644 | 834 bytes |
/usr/lib/R/site-library/GenomicFeatures/help/paths.rds
|
application/gzip | root:root | 0o644 | 436 bytes |
/usr/lib/R/site-library/GenomicFeatures/html/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/html/00Index.html
|
text/html | root:root | 0o644 | 17.9 KB |
/usr/lib/R/site-library/GenomicFeatures/html/R.css
|
text/plain | root:root | 0o644 | 1.3 KB |
/usr/lib/R/site-library/GenomicFeatures/INDEX
|
text/plain | root:root | 0o644 | 2.6 KB |
/usr/lib/R/site-library/GenomicFeatures/Meta/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/Meta/hsearch.rds
|
application/gzip | root:root | 0o644 | 1.9 KB |
/usr/lib/R/site-library/GenomicFeatures/Meta/links.rds
|
application/gzip | root:root | 0o644 | 1.1 KB |
/usr/lib/R/site-library/GenomicFeatures/Meta/nsInfo.rds
|
application/gzip | root:root | 0o644 | 1.2 KB |
/usr/lib/R/site-library/GenomicFeatures/Meta/package.rds
|
application/gzip | root:root | 0o644 | 2.1 KB |
/usr/lib/R/site-library/GenomicFeatures/Meta/Rd.rds
|
application/gzip | root:root | 0o644 | 1.9 KB |
/usr/lib/R/site-library/GenomicFeatures/Meta/vignette.rds
|
application/gzip | root:root | 0o644 | 290 bytes |
/usr/lib/R/site-library/GenomicFeatures/NAMESPACE
|
text/plain | root:root | 0o644 | 3.4 KB |
/usr/lib/R/site-library/GenomicFeatures/NEWS
|
text/plain | root:root | 0o644 | 14.6 KB |
/usr/lib/R/site-library/GenomicFeatures/R/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/R/GenomicFeatures
|
text/plain | root:root | 0o644 | 1.0 KB |
/usr/lib/R/site-library/GenomicFeatures/R/GenomicFeatures.rdb
|
application/octet-stream | root:root | 0o644 | 349.4 KB |
/usr/lib/R/site-library/GenomicFeatures/R/GenomicFeatures.rdx
|
application/gzip | root:root | 0o644 | 8.0 KB |
/usr/lib/R/site-library/GenomicFeatures/script/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/script/maketRNAFDb.R
|
text/plain | root:root | 0o644 | 3.8 KB |
/usr/lib/R/site-library/GenomicFeatures/script/makeTxDbs.R
|
text/plain | root:root | 0o644 | 5.4 KB |
/usr/lib/R/site-library/GenomicFeatures/txdb-template/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/txdb-template/DESCRIPTION
|
text/plain | root:root | 0o644 | 424 bytes |
/usr/lib/R/site-library/GenomicFeatures/txdb-template/inst/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/txdb-template/inst/extdata/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/txdb-template/man/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/txdb-template/man/package.Rd
|
text/plain | root:root | 0o644 | 1007 bytes |
/usr/lib/R/site-library/GenomicFeatures/txdb-template/NAMESPACE
|
text/plain | root:root | 0o644 | 214 bytes |
/usr/lib/R/site-library/GenomicFeatures/txdb-template/R/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/txdb-template/R/zzz.R
|
text/plain | root:root | 0o644 | 502 bytes |
/usr/lib/R/site-library/GenomicFeatures/unitTests/
|
root:root | 0o755 | ||
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_coordinate-mapping-methods.R
|
text/plain | root:root | 0o644 | 13.2 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_disjointExons.R
|
text/plain | root:root | 0o644 | 709 bytes |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_makeIdsForUniqueDataFrameRows.R
|
text/plain | root:root | 0o644 | 518 bytes |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_makeTxDbFromBiomart.R
|
text/plain | root:root | 0o644 | 2.8 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_makeTxDbFromGFF.R
|
text/plain | root:root | 0o644 | 2.9 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_makeTxDbFromGRanges.R
|
text/plain | root:root | 0o644 | 14.1 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_makeTxDbFromUCSC.R
|
text/plain | root:root | 0o644 | 3.3 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_makeTxDb.R
|
text/plain | root:root | 0o644 | 3.2 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_select-methods.R
|
text/plain | root:root | 0o644 | 11.3 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_transcriptsByOverlaps.R
|
text/plain | root:root | 0o644 | 3.9 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_transcriptsBy.R
|
text/plain | root:root | 0o644 | 8.9 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_transcripts.R
|
text/plain | root:root | 0o644 | 9.7 KB |
/usr/lib/R/site-library/GenomicFeatures/unitTests/test_TxDb_seqinfo.R
|
text/plain | root:root | 0o644 | 3.7 KB |
/usr/share/
|
root:root | 0o755 | ||
/usr/share/doc/
|
root:root | 0o755 | ||
/usr/share/doc/r-bioc-genomicfeatures/
|
root:root | 0o755 | ||
/usr/share/doc/r-bioc-genomicfeatures/changelog.Debian.gz
|
application/gzip | root:root | 0o644 | 587 bytes |
/usr/share/doc/r-bioc-genomicfeatures/copyright
|
text/plain | root:root | 0o644 | 5.3 KB |
/usr/share/doc/r-bioc-genomicfeatures/NEWS.gz
|
application/gzip | root:root | 0o644 | 5.1 KB |
/usr/share/doc/r-bioc-genomicfeatures/README.test
|
text/plain | root:root | 0o644 | 2.1 KB |
/usr/share/doc/r-bioc-genomicfeatures/TODO
|
text/plain | root:root | 0o644 | 1.1 KB |