stacks 1.35-1ubuntu1 in ubuntu - xenial / universe

About

This package is 721.8 KB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/s/stacks/stacks_1.35-1ubuntu1_amd64.deb .

View its full control file here: debian/control.

Description

pipeline for building loci from short-read DNA sequences

Relations

This package depends on: libc6 (>= 2.15), libgcc1 (>= 1:3.0), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.6), samtools, libdbi-perl.

This package recommends: libspreadsheet-writeexcel-perl.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

stacks 1.35-1ubuntu1 is in ubuntu - xenial / universe. This package's architecture is: amd64.

File Mime Type Owner Mode Size
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/stacks text/x-shellscript root:root 0o755 771 bytes
/usr/lib/ root:root 0o755
/usr/lib/debian-med/ root:root 0o755
/usr/lib/debian-med/bin/ root:root 0o755
/usr/lib/debian-med/bin/clone_filter root:root 0o777
/usr/lib/debian-med/bin/cstacks root:root 0o777
/usr/lib/debian-med/bin/denovo_map root:root 0o777
/usr/lib/debian-med/bin/denovo_map.pl root:root 0o777
/usr/lib/debian-med/bin/estacks root:root 0o777
/usr/lib/debian-med/bin/exec_velvet root:root 0o777
/usr/lib/debian-med/bin/exec_velvet.pl root:root 0o777
/usr/lib/debian-med/bin/export_sql root:root 0o777
/usr/lib/debian-med/bin/export_sql.pl root:root 0o777
/usr/lib/debian-med/bin/genotypes root:root 0o777
/usr/lib/debian-med/bin/hstacks root:root 0o777
/usr/lib/debian-med/bin/index_radtags root:root 0o777
/usr/lib/debian-med/bin/index_radtags.pl root:root 0o777
/usr/lib/debian-med/bin/kmer_filter root:root 0o777
/usr/lib/debian-med/bin/load_radtags root:root 0o777
/usr/lib/debian-med/bin/load_radtags.pl root:root 0o777
/usr/lib/debian-med/bin/load_sequences root:root 0o777
/usr/lib/debian-med/bin/load_sequences.pl root:root 0o777
/usr/lib/debian-med/bin/phasedstacks root:root 0o777
/usr/lib/debian-med/bin/populations root:root 0o777
/usr/lib/debian-med/bin/process_radtags root:root 0o777
/usr/lib/debian-med/bin/process_shortreads root:root 0o777
/usr/lib/debian-med/bin/pstacks root:root 0o777
/usr/lib/debian-med/bin/ref_map root:root 0o777
/usr/lib/debian-med/bin/ref_map.pl root:root 0o777
/usr/lib/debian-med/bin/rxstacks root:root 0o777
/usr/lib/debian-med/bin/sort_read_pairs root:root 0o777
/usr/lib/debian-med/bin/sort_read_pairs.pl root:root 0o777
/usr/lib/debian-med/bin/sstacks root:root 0o777
/usr/lib/debian-med/bin/stacks_export_notify root:root 0o777
/usr/lib/debian-med/bin/stacks_export_notify.pl root:root 0o777
/usr/lib/debian-med/bin/ustacks root:root 0o777
/usr/lib/stacks/ root:root 0o755
/usr/lib/stacks/bin/ root:root 0o755
/usr/lib/stacks/bin/clone_filter application/x-executable root:root 0o755 417.8 KB
/usr/lib/stacks/bin/cstacks application/x-executable root:root 0o755 223.6 KB
/usr/lib/stacks/bin/denovo_map root:root 0o777
/usr/lib/stacks/bin/denovo_map.pl text/x-perl root:root 0o755 23.5 KB
/usr/lib/stacks/bin/estacks application/x-executable root:root 0o755 127.4 KB
/usr/lib/stacks/bin/exec_velvet root:root 0o777
/usr/lib/stacks/bin/exec_velvet.pl text/x-perl root:root 0o755 8.7 KB
/usr/lib/stacks/bin/export_sql root:root 0o777
/usr/lib/stacks/bin/export_sql.pl text/x-perl root:root 0o755 31.1 KB
/usr/lib/stacks/bin/genotypes application/x-executable root:root 0o755 284.6 KB
/usr/lib/stacks/bin/hstacks application/x-executable root:root 0o755 191.4 KB
/usr/lib/stacks/bin/index_radtags root:root 0o777
/usr/lib/stacks/bin/index_radtags.pl text/x-perl root:root 0o755 19.9 KB
/usr/lib/stacks/bin/kmer_filter application/x-executable root:root 0o755 251.8 KB
/usr/lib/stacks/bin/load_radtags root:root 0o777
/usr/lib/stacks/bin/load_radtags.pl text/x-perl root:root 0o755 14.7 KB
/usr/lib/stacks/bin/load_sequences root:root 0o777
/usr/lib/stacks/bin/load_sequences.pl text/x-perl root:root 0o755 6.1 KB
/usr/lib/stacks/bin/phasedstacks application/x-executable root:root 0o755 119.6 KB
/usr/lib/stacks/bin/populations application/x-executable root:root 0o755 529.7 KB
/usr/lib/stacks/bin/process_radtags application/x-executable root:root 0o755 291.0 KB
/usr/lib/stacks/bin/process_shortreads application/x-executable root:root 0o755 358.3 KB
/usr/lib/stacks/bin/pstacks application/x-executable root:root 0o755 209.5 KB
/usr/lib/stacks/bin/ref_map root:root 0o777
/usr/lib/stacks/bin/ref_map.pl text/x-perl root:root 0o755 21.9 KB
/usr/lib/stacks/bin/rxstacks application/x-executable root:root 0o755 175.8 KB
/usr/lib/stacks/bin/sort_read_pairs root:root 0o777
/usr/lib/stacks/bin/sort_read_pairs.pl text/x-perl root:root 0o755 14.6 KB
/usr/lib/stacks/bin/sstacks application/x-executable root:root 0o755 143.5 KB
/usr/lib/stacks/bin/stacks_export_notify root:root 0o777
/usr/lib/stacks/bin/stacks_export_notify.pl text/x-perl root:root 0o755 6.3 KB
/usr/lib/stacks/bin/ustacks application/x-executable root:root 0o755 288.2 KB
/usr/share/ root:root 0o755
/usr/share/doc/ root:root 0o755
/usr/share/doc/stacks/ root:root 0o755
/usr/share/doc/stacks/changelog.Debian.gz application/gzip root:root 0o644 752 bytes
/usr/share/doc/stacks/copyright text/plain root:root 0o644 1.3 KB
/usr/share/doc/stacks/README.Debian text/plain root:root 0o644 1.4 KB

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