/usr/share/doc/staden-io-lib/test/srf2fasta.test is in staden-io-lib-examples 1.14.6-2.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 | #!/bin/sh
if test ! -d $outdir
then
mkdir $outdir
fi
/usr/bin/srf2fasta $srcdir/data/proc.srf > $outdir/slx.fasta
cmp $outdir/slx.fasta $srcdir/data/slx.fasta || exit 1
/usr/bin/srf2fasta -C $srcdir/data/proc.srf > $outdir/slx.fasta
cmp $outdir/slx.fasta $srcdir/data/slx-C.fasta || exit 1
/usr/bin/srf2fasta $srcdir/data/raw.srf > $outdir/slx.fasta
cmp $outdir/slx.fasta $srcdir/data/slx.fasta || exit 1
/usr/bin/srf2fasta -C $srcdir/data/raw.srf > $outdir/slx.fasta
cmp $outdir/slx.fasta $srcdir/data/slx-C.fasta || exit 1
/usr/bin/srf2fasta $srcdir/data/both.srf > $outdir/slx.fasta
cmp $outdir/slx.fasta $srcdir/data/slx.fasta || exit 1
/usr/bin/srf2fasta -C $srcdir/data/both.srf > $outdir/slx.fasta
cmp $outdir/slx.fasta $srcdir/data/slx-C.fasta || exit 1
|