This file is indexed.

/usr/share/doc/t-coffee-examples/1D4V-1.pdb is in t-coffee-examples 11.00.8cbe486-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

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ATOM   1338  N   PRO A  69      93.727   8.963  -2.098  1.00133.21           N  
ATOM   1339  CA  PRO A  69      94.123   8.520  -0.738  1.00134.64           C  
ATOM   1340  C   PRO A  69      94.728   9.655   0.097  1.00137.39           C  
ATOM   1341  O   PRO A  69      95.430   9.408   1.082  1.00134.68           O  
ATOM   1342  CB  PRO A  69      95.124   7.388  -0.926  1.00129.74           C  
ATOM   1343  CG  PRO A  69      94.692   6.829  -2.279  1.00129.01           C  
ATOM   1344  CD  PRO A  69      94.320   8.068  -3.109  1.00131.02           C  
ATOM   1345  N   GLN A  70      94.440  10.894  -0.299  1.00140.07           N  
ATOM   1346  CA  GLN A  70      94.953  12.083   0.388  1.00143.40           C  
ATOM   1347  C   GLN A  70      93.761  12.925   0.871  1.00144.21           C  
ATOM   1348  O   GLN A  70      92.771  13.063   0.150  1.00145.41           O  
ATOM   1349  CB  GLN A  70      95.833  12.885  -0.588  1.00142.02           C  
ATOM   1350  CG  GLN A  70      96.825  13.856   0.048  1.00138.11           C  
ATOM   1351  CD  GLN A  70      97.816  14.417  -0.965  1.00135.07           C  
ATOM   1352  OE1 GLN A  70      97.427  15.050  -1.950  1.00133.14           O  
ATOM   1353  NE2 GLN A  70      99.104  14.181  -0.728  1.00129.17           N  
ATOM   1354  N   GLN A  71      93.849  13.481   2.080  1.00142.91           N  
ATOM   1355  CA  GLN A  71      92.746  14.276   2.629  1.00140.14           C  
ATOM   1356  C   GLN A  71      93.153  15.502   3.459  1.00138.52           C  
ATOM   1357  O   GLN A  71      94.244  16.050   3.283  1.00136.09           O  
ATOM   1358  CB  GLN A  71      91.838  13.375   3.473  1.00139.25           C  
ATOM   1359  CG  GLN A  71      91.129  12.279   2.690  1.00135.76           C  
ATOM   1360  CD  GLN A  71      90.246  12.833   1.587  1.00134.92           C  
ATOM   1361  OE1 GLN A  71      89.488  13.781   1.802  1.00131.55           O  
ATOM   1362  NE2 GLN A  71      90.330  12.235   0.402  1.00129.07           N  
ATOM   1363  N   LYS A  72      92.261  15.923   4.359  1.00136.02           N  
ATOM   1364  CA  LYS A  72      92.502  17.086   5.218  1.00132.98           C  
ATOM   1365  C   LYS A  72      91.954  16.968   6.651  1.00129.95           C  
ATOM   1366  O   LYS A  72      92.678  16.559   7.560  1.00132.98           O  
ATOM   1367  CB  LYS A  72      91.931  18.352   4.560  1.00131.85           C  
ATOM   1368  CG  LYS A  72      92.978  19.394   4.171  1.00124.88           C  
ATOM   1369  CD  LYS A  72      93.713  19.925   5.393  1.00121.22           C  
ATOM   1370  CE  LYS A  72      94.788  20.926   5.003  1.00117.70           C  
ATOM   1371  NZ  LYS A  72      95.567  21.389   6.185  1.00108.23           N  
ATOM   1372  N   ARG A  73      90.684  17.324   6.851  1.00124.28           N  
ATOM   1373  CA  ARG A  73      90.077  17.282   8.185  1.00117.03           C  
ATOM   1374  C   ARG A  73      88.992  16.228   8.434  1.00110.97           C  
ATOM   1375  O   ARG A  73      89.293  15.116   8.878  1.00104.78           O  
ATOM   1376  CB  ARG A  73      89.523  18.667   8.548  1.00117.17           C  
ATOM   1377  CG  ARG A  73      90.599  19.735   8.705  1.00121.45           C  
ATOM   1378  CD  ARG A  73      90.007  21.109   9.013  1.00119.91           C  
ATOM   1379  NE  ARG A  73      91.045  22.134   9.115  1.00117.85           N  
ATOM   1380  CZ  ARG A  73      91.877  22.465   8.129  1.00118.70           C  
ATOM   1381  NH1 ARG A  73      91.798  21.854   6.953  1.00119.63           N  
ATOM   1382  NH2 ARG A  73      92.798  23.402   8.320  1.00116.49           N  
ATOM   1383  N   SER A  74      87.733  16.580   8.167  1.00105.15           N  
ATOM   1384  CA  SER A  74      86.631  15.652   8.403  1.00 92.69           C  
ATOM   1385  C   SER A  74      85.597  15.525   7.298  1.00 89.26           C  
ATOM   1386  O   SER A  74      85.092  16.520   6.771  1.00 81.84           O  
ATOM   1387  CB  SER A  74      85.902  16.018   9.696  1.00 96.81           C  
ATOM   1388  OG  SER A  74      86.699  15.751  10.834  1.00107.56           O  
ATOM   1389  N   SER A  75      85.285  14.270   6.976  1.00 83.81           N  
ATOM   1390  CA  SER A  75      84.291  13.918   5.968  1.00 74.87           C  
ATOM   1391  C   SER A  75      83.332  12.895   6.580  1.00 64.85           C  
ATOM   1392  O   SER A  75      83.719  12.085   7.427  1.00 63.93           O  
ATOM   1393  CB  SER A  75      84.967  13.328   4.730  1.00 80.59           C  
ATOM   1394  OG  SER A  75      85.700  14.324   4.034  1.00 94.50           O  
ATOM   1395  N   PRO A  76      82.063  12.919   6.167  1.00 56.05           N  
ATOM   1396  CA  PRO A  76      81.118  11.957   6.735  1.00 66.68           C  
ATOM   1397  C   PRO A  76      81.305  10.526   6.276  1.00 73.74           C  
ATOM   1398  O   PRO A  76      81.526  10.279   5.091  1.00 86.60           O  
ATOM   1399  CB  PRO A  76      79.765  12.518   6.318  1.00 61.43           C  
ATOM   1400  CG  PRO A  76      80.063  13.185   5.037  1.00 68.73           C  
ATOM   1401  CD  PRO A  76      81.366  13.899   5.325  1.00 61.98           C  
ATOM   1402  N   SER A  77      81.238   9.588   7.220  1.00 69.42           N  
ATOM   1403  CA  SER A  77      81.343   8.179   6.887  1.00 67.11           C  
ATOM   1404  C   SER A  77      80.124   7.874   6.018  1.00 80.84           C  
ATOM   1405  O   SER A  77      79.936   8.497   4.969  1.00 87.04           O  
ATOM   1406  CB  SER A  77      81.313   7.325   8.149  1.00 71.59           C  
ATOM   1407  OG  SER A  77      82.609   6.877   8.505  1.00 69.43           O  
ATOM   1408  N   GLU A  78      79.282   6.937   6.436  1.00 79.05           N  
ATOM   1409  CA  GLU A  78      78.110   6.629   5.629  1.00 84.99           C  
ATOM   1410  C   GLU A  78      77.023   7.697   5.777  1.00 85.96           C  
ATOM   1411  O   GLU A  78      75.861   7.390   6.071  1.00 78.83           O  
ATOM   1412  CB  GLU A  78      77.558   5.247   5.983  1.00 89.38           C  
ATOM   1413  CG  GLU A  78      78.154   4.114   5.150  1.00 98.13           C  
ATOM   1414  CD  GLU A  78      77.912   4.286   3.649  1.00106.21           C  
ATOM   1415  OE1 GLU A  78      76.742   4.463   3.241  1.00102.57           O  
ATOM   1416  OE2 GLU A  78      78.894   4.237   2.874  1.00103.57           O  
ATOM   1417  N   GLY A  79      77.416   8.951   5.561  1.00 81.22           N  
ATOM   1418  CA  GLY A  79      76.484  10.062   5.665  1.00 77.16           C  
ATOM   1419  C   GLY A  79      76.316  10.581   7.084  1.00 71.62           C  
ATOM   1420  O   GLY A  79      75.480  11.445   7.336  1.00 67.55           O  
ATOM   1421  N   LEU A  80      77.124  10.062   8.003  1.00 68.10           N  
ATOM   1422  CA  LEU A  80      77.061  10.447   9.407  1.00 65.13           C  
ATOM   1423  C   LEU A  80      78.378  10.993   9.935  1.00 70.08           C  
ATOM   1424  O   LEU A  80      79.441  10.453   9.630  1.00 75.06           O  
ATOM   1425  CB  LEU A  80      76.665   9.240  10.253  1.00 55.76           C  
ATOM   1426  CG  LEU A  80      75.295   8.644   9.937  1.00 64.39           C  
ATOM   1427  CD1 LEU A  80      75.081   7.431  10.811  1.00 56.11           C  
ATOM   1428  CD2 LEU A  80      74.195   9.684  10.154  1.00 59.07           C  
ATOM   1429  N   CYS A  81      78.309  12.050  10.746  1.00 67.57           N  
ATOM   1430  CA  CYS A  81      79.513  12.637  11.331  1.00 51.69           C  
ATOM   1431  C   CYS A  81      79.749  12.098  12.727  1.00 49.28           C  
ATOM   1432  O   CYS A  81      78.821  11.644  13.396  1.00 51.43           O  
ATOM   1433  CB  CYS A  81      79.411  14.147  11.361  1.00 57.49           C  
ATOM   1434  SG  CYS A  81      79.452  14.872   9.703  1.00 60.54           S  
ATOM   1435  N   PRO A  82      81.001  12.151  13.196  1.00 45.06           N  
ATOM   1436  CA  PRO A  82      81.283  11.625  14.535  1.00 45.44           C  
ATOM   1437  C   PRO A  82      80.869  12.479  15.730  1.00 41.78           C  
ATOM   1438  O   PRO A  82      80.531  13.652  15.591  1.00 50.80           O  
ATOM   1439  CB  PRO A  82      82.798  11.382  14.487  1.00 47.49           C  
ATOM   1440  CG  PRO A  82      83.290  12.478  13.563  1.00 38.70           C  
ATOM   1441  CD  PRO A  82      82.239  12.541  12.490  1.00 37.31           C  
ATOM   1442  N   PRO A  83      80.861  11.876  16.922  1.00 37.10           N  
ATOM   1443  CA  PRO A  83      80.502  12.602  18.144  1.00 36.60           C  
ATOM   1444  C   PRO A  83      81.415  13.845  18.194  1.00 50.10           C  
ATOM   1445  O   PRO A  83      82.588  13.776  17.806  1.00 50.41           O  
ATOM   1446  CB  PRO A  83      80.854  11.619  19.234  1.00 35.17           C  
ATOM   1447  CG  PRO A  83      80.557  10.276  18.597  1.00 37.52           C  
ATOM   1448  CD  PRO A  83      81.105  10.448  17.196  1.00 41.46           C  
ATOM   1449  N   GLY A  84      80.884  14.974  18.650  1.00 42.22           N  
ATOM   1450  CA  GLY A  84      81.691  16.184  18.723  1.00 34.72           C  
ATOM   1451  C   GLY A  84      81.563  17.013  17.467  1.00 36.06           C  
ATOM   1452  O   GLY A  84      82.150  18.085  17.357  1.00 43.67           O  
ATOM   1453  N   HIS A  85      80.784  16.514  16.518  1.00 38.14           N  
ATOM   1454  CA  HIS A  85      80.574  17.218  15.269  1.00 40.71           C  
ATOM   1455  C   HIS A  85      79.115  17.131  14.842  1.00 44.62           C  
ATOM   1456  O   HIS A  85      78.310  16.428  15.466  1.00 46.26           O  
ATOM   1457  CB  HIS A  85      81.406  16.589  14.145  1.00 51.87           C  
ATOM   1458  CG  HIS A  85      82.846  16.388  14.485  1.00 48.38           C  
ATOM   1459  ND1 HIS A  85      83.854  17.133  13.917  1.00 53.73           N  
ATOM   1460  CD2 HIS A  85      83.445  15.541  15.353  1.00 44.88           C  
ATOM   1461  CE1 HIS A  85      85.011  16.759  14.426  1.00 50.68           C  
ATOM   1462  NE2 HIS A  85      84.790  15.795  15.300  1.00 48.75           N  
ATOM   1463  N   HIS A  86      78.804  17.867  13.778  1.00 43.52           N  
ATOM   1464  CA  HIS A  86      77.498  17.866  13.133  1.00 46.13           C  
ATOM   1465  C   HIS A  86      77.787  17.944  11.621  1.00 49.69           C  
ATOM   1466  O   HIS A  86      78.909  18.248  11.216  1.00 46.91           O  
ATOM   1467  CB  HIS A  86      76.651  19.060  13.582  1.00 49.92           C  
ATOM   1468  CG  HIS A  86      77.020  20.361  12.944  1.00 40.46           C  
ATOM   1469  ND1 HIS A  86      77.873  21.264  13.540  1.00 51.70           N  
ATOM   1470  CD2 HIS A  86      76.581  20.951  11.805  1.00 38.57           C  
ATOM   1471  CE1 HIS A  86      77.936  22.360  12.803  1.00 41.51           C  
ATOM   1472  NE2 HIS A  86      77.160  22.195  11.745  1.00 46.33           N  
ATOM   1473  N   ILE A  87      76.804  17.685  10.773  1.00 47.88           N  
ATOM   1474  CA  ILE A  87      77.082  17.732   9.345  1.00 46.61           C  
ATOM   1475  C   ILE A  87      76.744  19.058   8.677  1.00 51.74           C  
ATOM   1476  O   ILE A  87      75.889  19.803   9.134  1.00 47.65           O  
ATOM   1477  CB  ILE A  87      76.346  16.614   8.621  1.00 56.24           C  
ATOM   1478  CG1 ILE A  87      76.793  16.547   7.162  1.00 55.07           C  
ATOM   1479  CG2 ILE A  87      74.859  16.852   8.710  1.00 61.20           C  
ATOM   1480  CD1 ILE A  87      76.148  15.391   6.397  1.00 60.51           C  
ATOM   1481  N   SER A  88      77.439  19.342   7.582  1.00 59.42           N  
ATOM   1482  CA  SER A  88      77.239  20.567   6.825  1.00 57.76           C  
ATOM   1483  C   SER A  88      75.860  20.512   6.222  1.00 54.79           C  
ATOM   1484  O   SER A  88      75.272  19.437   6.137  1.00 48.73           O  
ATOM   1485  CB  SER A  88      78.286  20.669   5.715  1.00 59.71           C  
ATOM   1486  OG  SER A  88      77.990  21.751   4.846  1.00 82.82           O  
ATOM   1487  N   GLU A  89      75.344  21.659   5.792  1.00 61.48           N  
ATOM   1488  CA  GLU A  89      74.007  21.693   5.211  1.00 72.88           C  
ATOM   1489  C   GLU A  89      73.907  20.666   4.086  1.00 81.44           C  
ATOM   1490  O   GLU A  89      73.705  19.479   4.344  1.00 85.66           O  
ATOM   1491  CB  GLU A  89      73.689  23.093   4.695  1.00 79.85           C  
ATOM   1492  CG  GLU A  89      72.242  23.273   4.272  1.00 86.48           C  
ATOM   1493  CD  GLU A  89      71.975  24.664   3.747  1.00 96.12           C  
ATOM   1494  OE1 GLU A  89      72.764  25.125   2.892  1.00 94.25           O  
ATOM   1495  OE2 GLU A  89      70.982  25.289   4.181  1.00 96.33           O  
ATOM   1496  N   ASP A  90      74.031  21.104   2.839  1.00 84.58           N  
ATOM   1497  CA  ASP A  90      73.986  20.141   1.749  1.00 92.47           C  
ATOM   1498  C   ASP A  90      75.444  19.831   1.457  1.00 89.34           C  
ATOM   1499  O   ASP A  90      75.823  18.663   1.348  1.00 80.61           O  
ATOM   1500  CB  ASP A  90      73.283  20.706   0.508  1.00104.04           C  
ATOM   1501  CG  ASP A  90      72.675  19.607  -0.369  1.00111.23           C  
ATOM   1502  OD1 ASP A  90      71.823  18.842   0.137  1.00107.95           O  
ATOM   1503  OD2 ASP A  90      73.047  19.504  -1.560  1.00116.90           O  
ATOM   1504  N   GLY A  91      76.262  20.878   1.335  1.00 86.80           N  
ATOM   1505  CA  GLY A  91      77.681  20.656   1.125  1.00 82.59           C  
ATOM   1506  C   GLY A  91      77.931  19.702   2.269  1.00 88.17           C  
ATOM   1507  O   GLY A  91      77.337  19.882   3.330  1.00 92.26           O  
ATOM   1508  N   ARG A  92      78.753  18.677   2.098  1.00 85.30           N  
ATOM   1509  CA  ARG A  92      78.915  17.774   3.217  1.00 76.79           C  
ATOM   1510  C   ARG A  92      80.286  17.573   3.828  1.00 81.73           C  
ATOM   1511  O   ARG A  92      81.106  16.761   3.378  1.00 75.26           O  
ATOM   1512  CB  ARG A  92      78.259  16.441   2.891  1.00 67.52           C  
ATOM   1513  CG  ARG A  92      76.747  16.568   2.888  1.00 74.07           C  
ATOM   1514  CD  ARG A  92      76.036  15.279   2.480  1.00 98.54           C  
ATOM   1515  NE  ARG A  92      76.183  14.937   1.061  1.00103.17           N  
ATOM   1516  CZ  ARG A  92      77.203  14.253   0.544  1.00109.61           C  
ATOM   1517  NH1 ARG A  92      78.192  13.824   1.320  1.00113.38           N  
ATOM   1518  NH2 ARG A  92      77.227  13.981  -0.755  1.00110.70           N  
ATOM   1519  N   ASP A  93      80.498  18.349   4.885  1.00 73.21           N  
ATOM   1520  CA  ASP A  93      81.709  18.322   5.672  1.00 70.68           C  
ATOM   1521  C   ASP A  93      81.196  18.007   7.058  1.00 68.89           C  
ATOM   1522  O   ASP A  93      79.983  18.020   7.294  1.00 62.45           O  
ATOM   1523  CB  ASP A  93      82.374  19.697   5.698  1.00 77.37           C  
ATOM   1524  CG  ASP A  93      82.604  20.258   4.318  1.00 82.91           C  
ATOM   1525  OD1 ASP A  93      81.611  20.502   3.597  1.00 83.76           O  
ATOM   1526  OD2 ASP A  93      83.783  20.453   3.954  1.00 98.09           O  
ATOM   1527  N   CYS A  94      82.110  17.722   7.973  1.00 63.23           N  
ATOM   1528  CA  CYS A  94      81.722  17.443   9.337  1.00 60.08           C  
ATOM   1529  C   CYS A  94      82.289  18.568  10.182  1.00 64.34           C  
ATOM   1530  O   CYS A  94      83.499  18.625  10.408  1.00 77.51           O  
ATOM   1531  CB  CYS A  94      82.270  16.090   9.786  1.00 59.61           C  
ATOM   1532  SG  CYS A  94      81.390  14.638   9.105  1.00 70.73           S  
ATOM   1533  N   ILE A  95      81.420  19.474  10.629  1.00 60.55           N  
ATOM   1534  CA  ILE A  95      81.859  20.605  11.433  1.00 56.27           C  
ATOM   1535  C   ILE A  95      81.894  20.267  12.902  1.00 61.31           C  
ATOM   1536  O   ILE A  95      80.999  19.588  13.412  1.00 65.86           O  
ATOM   1537  CB  ILE A  95      80.950  21.815  11.235  1.00 66.28           C  
ATOM   1538  CG1 ILE A  95      80.726  22.055   9.740  1.00 71.32           C  
ATOM   1539  CG2 ILE A  95      81.594  23.050  11.854  1.00 61.07           C  
ATOM   1540  CD1 ILE A  95      79.845  23.247   9.440  1.00 79.06           C