/usr/share/doc/t-coffee-examples/3d.aln is in t-coffee-examples 11.00.8cbe486-2.
This file is owned by root:root, with mode 0o644.
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1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 | CLUSTAL FORMAT for T-COFFEE Version_4.39 [http://www.tcoffee.org], CPU=2.17 sec, SCORE=73, Nseq=3, Len=182
1cms GEVASVPLTNY--LDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKNHQRF
4ape -STGSATTTPIDSLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEVDGQTIY
3app AASGVATNTPTAN-DEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQSGHSVY
. .. * *. *: : :* :.: *****:*:** * :. ..: :
1cms DPRKSSTFQNL-GKPLSIHYGTGSMQ-GILGYDTVTVSNIVDIQQTVGLSTQEPGDVFTY
4ape TPSKSTTAKLLSGATWSISYGDGSSSSGDVYTDTVSVGGLTVTGQAVESAKKVSSSFTED
3app NPS--ATGKELSGYTWSISYGDGSSASGNVFTDSVTVGGVTAHGQAVQAAQQISAQFQQD
* :* : * * . ** ** ** * : *:*:*..:. *:* : : ....
1cms AEFDGILGMAYPSLASE---YSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDP
4ape STIDGLLGLAFSTLNTVSPTQQKTFFDNAK--ASLDSPVFTADLGY-HAPGTYNFGFIDT
3app TNNDGLLGLAFSSINTVQPQSQTTFFDTVK--SSLAQPLFAVALKH-QQPGVYDFGFIDS
: **:**:*:.:: : . ..**. : . :*:. : . :* **.
1cms SY
4ape TA
3app SK
:
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