/usr/bin/condor_run is in htcondor 8.4.2~dfsg.1-1build1.
This file is owned by root:root, with mode 0o755.
The actual contents of the file can be viewed below.
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##**************************************************************
##
## Copyright (C) 1990-2007, Condor Team, Computer Sciences Department,
## University of Wisconsin-Madison, WI.
##
## Licensed under the Apache License, Version 2.0 (the "License"); you
## may not use this file except in compliance with the License. You may
## obtain a copy of the License at
##
## http://www.apache.org/licenses/LICENSE-2.0
##
## Unless required by applicable law or agreed to in writing, software
## distributed under the License is distributed on an "AS IS" BASIS,
## WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
## See the License for the specific language governing permissions and
## limitations under the License.
##
##**************************************************************
###########################################################################
#
# This is condor_run, a simple front-end to condor_submit for submitting
# vanilla jobs to Condor.
#
# usage: condor_run "shell-cmd"
#
# examples:
#
# condor_run "zcat data.gz | awk -f myscript.awk > results.txt"
# condor_run "cc -o myprog myprog.c"
# condor_run "make"
# condor_run "condor_compile cc -o myprog myprog.c"
#
# condor_run by Jim Basney <jbasney@cs.wisc.edu> 4/3/2000
#
###########################################################################
my @command;
my @appends;
my $universe = 'vanilla';
if (!defined($ARGV[0])) {
goto HELP;
}
while ( $_ = shift( @ARGV ) ) {
SWITCH: {
if ( /^-h.*/ ) {
HELP:
print "usage: $0 [-u <universe>] [-a command]* \"shell-cmd\"\n";
print "\twhere shell-cmd is any Unix shell statement.\n";
print "\t-u lets you set the universe to which the job is submitted.\n";
print "\t The default is vanilla.\n";
print "\t-a lets you add additional submit commands\n";
print "\t e.g. -a request_memory=1024\n";
print "\tEnvironment variables CONDOR_ARCH, CONDOR_OPSYS, and\n";
print "\tCONDOR_REQUIREMENTS may specify remote machine's Arch,\n";
print "\tOpSys, and any additional requirements.\n";
exit 1;
}
if ( /^-u(.*)/ ) {
$universe = $1 ? $1 : shift(@ARGV);
next SWITCH;
}
if ( /^-a.*/ ) {
push(@appends, shift(@ARGV));
next SWITCH;
}
# Anything passed in that isn't -u or -a is part of the command to run
push(@command, $_);
}
}
if (!@command) {
goto HELP;
}
# grab current working directory for initial dir in system using automounter
$pwd = `pwd`;
chomp $pwd;
# set up environment for running something in the current directory in case
# they want to run something in the current working directory and they
# don't specify a "./" infront of it.
$ENV{'PATH'} .= ":.";
# setup cleanup subroutine and error handlers
sub cleanfiles {
unlink ".condor_run.$$", ".condor_submit.$$", ".condor_log.$$";
unlink ".condor_out.$$", ".condor_error.$$";
}
sub abort {
`condor_rm $cluster 2>&1 > /dev/null` if defined($cluster);
&cleanfiles;
die @_;
}
sub handler {
local($sig) = @_;
&abort("Killed by SIG$sig.\n");
}
$SIG{'HUP'} = 'handler';
$SIG{'INT'} = 'handler';
$SIG{'QUIT'} = 'handler';
$SIG{'TERM'} = 'handler';
# use the user's shell in the script we submit to Condor
$shell = $ENV{'SHELL'};
$shell = "/bin/sh" if (!defined($shell));
# get any requirements from the user's environment
$requirements = $ENV{'CONDOR_REQUIREMENTS'};
$arch = $ENV{'CONDOR_ARCH'};
if (defined($arch)) {
$requirements .= " && " if (defined($requirements));
$requirements .= "Arch == \"" . $arch . "\"";
}
$opsys = $ENV{'CONDOR_OPSYS'};
if (defined($opsys)) {
$requirements .= " && " if (defined($requirements));
$requirements .= "OpSys == \"" . $opsys . "\"";
}
# create a shell script containing the user's command
open(CMD, ">.condor_run.$$") ||
&abort("Can't create temporary (CMD) file in current directory.\n");
print CMD "#!", $shell, "\n";
foreach $arg (@command) {
print CMD $arg, " ";
}
print CMD "\n";
close(CMD) ||
&abort("Failed to write temporary (CMD) file in current directory.\n");
# fix the permissions to something nice.
chmod 0700, ".condor_run.$$";
# create a job description file to submit the shell script to Condor
open(JDF, ">.condor_submit.$$") ||
&abort("Can't create temporary (JDF) file in current directory.\n");
print JDF "universe = $universe\n";
print JDF "executable = .condor_run.$$\n";
print JDF "initialdir = $pwd\n";
print JDF "notification = NEVER\n";
print JDF "log = .condor_log.$$\n";
print JDF "output = .condor_out.$$\n";
print JDF "error = .condor_error.$$\n";
print JDF "getenv = True\n";
print JDF "should_transfer_files = YES\n";
print JDF "when_to_transfer_output = ON_EXIT\n";
print JDF "requirements = ", $requirements, "\n" if (defined($requirements));
foreach my $append (@appends) {
print JDF $append . "\n";
}
print JDF "queue\n";
close(JDF) ||
&abort("Failed to write temporary (JDF) file in current directory.\n");
# submit the job; $cluster contains cluster number if successful
open(SUBMIT, "condor_submit .condor_submit.$$ 2>&1 |") ||
&abort("Failed to run condor_submit. Please check your path.\n");
while(<SUBMIT>) {
if (/^1 job\(s\) submitted to cluster (\d+)./) {
($cluster) = $1;
} elsif (/WARNING.*Invalid log file/ ||
/WARNING.*is not writable by condor/) {
print STDERR $_;
&abort("Failed to submit Condor job.\n");
} else {
$submit_errors .= $_;
}
}
if (!close(SUBMIT) || !defined($cluster)) {
print STDERR $submit_errors;
&abort("Failed to submit Condor job.\n");
}
# watch the Condor log to see when the job completes
$done = 0;
$status = 0;
while (!$done) {
sleep 5;
open(LOG, "<.condor_log.$$") ||
&abort("Failed to open Condor log file.\n");
while (<LOG>) {
if (/termination \(return value (\d+)\)/) {
$status = $1;
$done = 1;
} elsif (/termination \(signal (\d+)\)/) {
print STDERR "Condor job killed by signal ", $1 , ".\n";
$done = 1;
} elsif ( /^009/ && /Job was aborted by the user/ ) {
print STDERR "The job was aborted by the user";
$done = 1;
}
}
close(LOG) || &abort("Failed to close Condor log file.\n");
}
undef $cluster; # indicate that job is no longer in queue
# display stdout to the terminal
open(OUTPUT, "<.condor_out.$$") || &abort("Failed to open job output file.\n");
while (<OUTPUT>) {
print STDOUT;
}
close(OUTPUT) || &abort("Failed to open job output file.\n");
# display stderr to the terminal
open(ERROR, "<.condor_error.$$") || &abort("Failed to open job error file.\n");
while (<ERROR>) {
print STDERR;
}
close(ERROR) || &abort("Failed to open job output file.\n");
&cleanfiles; # cleanup temporary files
exit $status; # exit with job's exit status
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