khmer 2.0+dfsg-5 in ubuntu - xenial / universe

About

This package is 5.6 MB. It is available at http://archive.ubuntu.com/ubuntu/pool/universe/k/khmer/khmer_2.0+dfsg-5_amd64.deb .

View its full control file here: debian/control.

Description

in-memory DNA sequence kmer counting, filtering & graph traversal

Relations

This package depends on: khmer-common, python3 (>= 3.5~), python3-screed (<< 1.0), libbz2-1.0, libc6 (>= 2.14), libgcc1 (>= 1:3.0), libgomp1 (>= 4.9), libstdc++6 (>= 5.2), zlib1g (>= 1:1.2.3.4), python3 (<< 3.6), python3-bz2file.

This package does not recommend any other package.

This package does not suggest any other package.

This package does not conflict with any other package.

Package Contents

This package is indexed.

khmer 2.0+dfsg-5 is in ubuntu - xenial / universe. This package's architecture is: amd64.

File Mime Type Owner Mode Size
postinst text/x-shellscript N/A N/A 237 bytes
prerm text/x-shellscript N/A N/A 383 bytes
/usr/ root:root 0o755
/usr/bin/ root:root 0o755
/usr/bin/khmer text/x-shellscript root:root 0o755 569 bytes
/usr/lib/ root:root 0o755
/usr/lib/khmer/ root:root 0o755
/usr/lib/khmer/bin/ root:root 0o755
/usr/lib/khmer/bin/abundance-dist.py text/x-python root:root 0o755 6.8 KB
/usr/lib/khmer/bin/abundance-dist-single.py text/x-python root:root 0o755 8.4 KB
/usr/lib/khmer/bin/annotate-partitions.py text/x-python root:root 0o755 4.7 KB
/usr/lib/khmer/bin/count-median.py text/x-python root:root 0o755 5.2 KB
/usr/lib/khmer/bin/do-partition.py text/x-python root:root 0o755 9.2 KB
/usr/lib/khmer/bin/extract-long-sequences.py text/x-python root:root 0o755 3.9 KB
/usr/lib/khmer/bin/extract-paired-reads.py text/x-python root:root 0o755 7.4 KB
/usr/lib/khmer/bin/extract-partitions.py text/x-python root:root 0o755 10.4 KB
/usr/lib/khmer/bin/fastq-to-fasta.py text/x-python root:root 0o755 4.3 KB
/usr/lib/khmer/bin/filter-abund.py text/x-python root:root 0o755 7.1 KB
/usr/lib/khmer/bin/filter-abund-single.py text/x-python root:root 0o755 6.1 KB
/usr/lib/khmer/bin/filter-stoptags.py text/x-python root:root 0o755 4.5 KB
/usr/lib/khmer/bin/find-knots.py text/x-python root:root 0o755 7.4 KB
/usr/lib/khmer/bin/interleave-reads.py text/x-python root:root 0o755 5.6 KB
/usr/lib/khmer/bin/load-graph.py text/x-python root:root 0o755 2.4 KB
/usr/lib/khmer/bin/load-into-counting.py text/x-python root:root 0o755 8.2 KB
/usr/lib/khmer/bin/make-initial-stoptags.py text/x-python root:root 0o755 6.1 KB
/usr/lib/khmer/bin/merge-partitions.py text/x-python root:root 0o755 4.4 KB
/usr/lib/khmer/bin/normalize-by-median.py text/x-python root:root 0o755 15.9 KB
/usr/lib/khmer/bin/partition-graph.py text/x-python root:root 0o755 7.2 KB
/usr/lib/khmer/bin/readstats.py text/x-python root:root 0o755 7.5 KB
/usr/lib/khmer/bin/sample-reads-randomly.py text/x-python root:root 0o755 9.0 KB
/usr/lib/khmer/bin/split-paired-reads.py text/x-python root:root 0o755 8.1 KB
/usr/lib/khmer/bin/trim-low-abund.py text/x-python root:root 0o755 14.1 KB
/usr/lib/khmer/bin/unique-kmers.py text/x-python root:root 0o755 6.6 KB
/usr/lib/python3/ root:root 0o755
/usr/lib/python3/dist-packages/ root:root 0o755
/usr/lib/python3/dist-packages/khmer/ root:root 0o755
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/usr/lib/python3/dist-packages/khmer/khmer_args.py text/x-c++ root:root 0o644 18.7 KB
/usr/lib/python3/dist-packages/khmer/_khmer.cc text/x-c root:root 0o644 142.3 KB
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/usr/lib/python3/dist-packages/khmer/khmer_logger.py text/x-python root:root 0o644 2.8 KB
/usr/lib/python3/dist-packages/khmer/tests/ root:root 0o755
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/usr/lib/python3/dist-packages/khmer/tests/test_countgraph.py text/x-c++ root:root 0o644 37.1 KB
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