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/usr/lib/pkgconfig/appindicator3-sharp-0.1.pc is in libappindicator3-0.1-cil-dev 12.10.0+git20151221-3.

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prefix=/usr
exec_prefix=${prefix}
libdir=/usr/lib
pkglibdir=${exec_prefix}/lib/cli/appindicator3-sharp-0.1
gapidir=/usr/lib/pkgconfig/../../share/gapi-3.0

Name: AppIndicator3#
Description: appindicator3 bindings for Mono
Version: 12.10.0
Requires: 
Libs: -r:${pkglibdir}/appindicator3-sharp.dll
Cflags: -I:${gapidir}/appindicator3-sharp-api.xml