/usr/include/bambamc/BamBam_BamCollatorInterface.h is in libbambamc-dev 0.0.50-1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 | /**
bambamc
Copyright (C) 2009-2013 German Tischler
Copyright (C) 2011-2013 Genome Research Limited
This program is free software: you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation, either version 3 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program. If not, see <http://www.gnu.org/licenses/>.
**/
#if ! defined(BAMBAM_BAMCOLLATORINTERFACE_H)
#define BAMBAM_BAMCOLLATORINTERFACE_H
#include <bambamc/BamBam_Unused.h>
#include <bambamc/BamBam_FastQRead.h>
extern int BamBam_AllocBamCollator(char const * filename, char const * filetype, char const * tempdirname, int const keepOrphans) BAMBAM_WARN_IF_UNUSEDRESULT;
extern void BamBam_FreeBamCollator(int const id);
extern int BamBam_ReadPair(int const id, BamBam_FastQRead * const reada, BamBam_FastQRead * const readb, void ** aligna, void ** alignb, char const term) BAMBAM_WARN_IF_UNUSEDRESULT;
#endif
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