/usr/include/blasr/algorithms/anchoring/ClusterProbability.hpp is in libblasr-dev 0~20151014+gitbe5d1bf-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 | #ifndef _BLASR_CLUSTER_PROBABILITY_HPP_
#define _BLASR_CLUSTER_PROBABILITY_HPP_
float ComputeAnchorProbability(float pMatch, int minAnchorLength);
float ComputeExpectedAnchorLength(float pMatch, int minAnchorLength,
float pAnchor);
float AnchorBasesPerRead(int readLength, float pAnchor);
float AnchorBasesPerReadSigma(float expAnchorBasesPerRead);
#endif
|