This file is indexed.

/usr/include/ITK-4.9/itkCannySegmentationLevelSetFunction.h is in libinsighttoolkit4-dev 4.9.0-4ubuntu1.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkCannySegmentationLevelSetFunction_h
#define itkCannySegmentationLevelSetFunction_h

#include "itkSegmentationLevelSetFunction.h"
#include "itkCastImageFilter.h"
#include "itkCannyEdgeDetectionImageFilter.h"
#include "itkDanielssonDistanceMapImageFilter.h"

namespace itk
{
/** \class CannySegmentationLevelSetFunction
 * \brief A refinement of the standard level-set function which computes a
 * speed term and advection term based on pseudo-Canny edges.  See
 * CannySegmentationLevelSetImageFilter for complete information.
 * \ingroup ITKLevelSets
 */
template< typename TImageType, typename TFeatureImageType = TImageType >
class CannySegmentationLevelSetFunction:
  public SegmentationLevelSetFunction< TImageType, TFeatureImageType >
{
public:
  /** Standard class typedefs. */
  typedef CannySegmentationLevelSetFunction                             Self;
  typedef SegmentationLevelSetFunction< TImageType, TFeatureImageType > Superclass;
  typedef SmartPointer< Self >                                          Pointer;
  typedef SmartPointer< const Self >                                    ConstPointer;
  typedef TFeatureImageType                                             FeatureImageType;

  /** Method for creation through the object factory. */
  itkNewMacro(Self);

  /** Run-time type information (and related methods) */
  itkTypeMacro(CannySegmentationLevelSetFunction, SegmentationLevelSetFunction);

  /** Extract some parameters from the superclass. */
  typedef typename Superclass::ImageType         ImageType;
  typedef typename Superclass::ScalarValueType   ScalarValueType;
  typedef typename Superclass::VectorImageType   VectorImageType;
  typedef typename Superclass::FeatureScalarType FeatureScalarType;
  typedef typename Superclass::RadiusType        RadiusType;

  /** Extract some parameters from the superclass. */
  itkStaticConstMacro(ImageDimension, unsigned int,
                      Superclass::ImageDimension);

  /** */
  void SetThreshold(ScalarValueType v)
  { m_Threshold = v; }
  ScalarValueType GetThreshold() const
  { return m_Threshold; }

  /** */
  void SetVariance(double v)
  { m_Variance = v; }
  double GetVariance() const
  { return m_Variance; }

  /** Compute the Speed Image. The Speed Image is the distance to the
      canny edges. */
  virtual void CalculateSpeedImage() ITK_OVERRIDE;

  /** Compute the advection image. The Advection Image is the gradeint
      image attenuated with the distance to the canny edges. */
  virtual void CalculateAdvectionImage() ITK_OVERRIDE;

  /** Compute the distance image. This is the distance to the canny
   * edges. */
  virtual void CalculateDistanceImage();

  virtual void Initialize(const RadiusType & r) ITK_OVERRIDE
  {
    Superclass::Initialize(r);

    this->SetAdvectionWeight(-1.0 * NumericTraits< ScalarValueType >::OneValue());
    this->SetPropagationWeight(-1.0 * NumericTraits< ScalarValueType >::OneValue());
    this->SetCurvatureWeight(NumericTraits< ScalarValueType >::OneValue());
  }

  ImageType * GetCannyImage()
  { return m_Canny->GetOutput(); }

protected:
  CannySegmentationLevelSetFunction()
  {
    m_Variance = 0.0;
    m_Threshold = NumericTraits< ScalarValueType >::ZeroValue();
    m_Caster = CastImageFilter< FeatureImageType, ImageType >::New();
    m_Canny = CannyEdgeDetectionImageFilter< ImageType, ImageType >::New();
    m_Distance = DanielssonDistanceMapImageFilter< ImageType, ImageType >::New();
  }

  virtual ~CannySegmentationLevelSetFunction() {}

  CannySegmentationLevelSetFunction(const Self &) ITK_DELETE_FUNCTION;
  void operator=(const Self &) ITK_DELETE_FUNCTION;

private:
  ScalarValueType m_Variance;
  double          m_Threshold;

  typename CannyEdgeDetectionImageFilter< ImageType, ImageType >::Pointer m_Canny;

  typename DanielssonDistanceMapImageFilter< ImageType, ImageType >::Pointer m_Distance;

  typename CastImageFilter< FeatureImageType, ImageType >::Pointer m_Caster;

  /** If FeatureImageType != ImageType,
   *  use the CastImageFilter to match them.
   */
  template <typename DummyImagePointerType>
  void AssignCannyInput(typename FeatureImageType::Pointer &feature,
                        DummyImagePointerType &)
  {
    m_Caster->SetInput(feature);
    m_Canny->SetInput( m_Caster->GetOutput() );
  }
  /** If FeatureImageType == ImageType,
   *  assign directly to the Canny filter
   */
  void AssignCannyInput(typename FeatureImageType::Pointer &feature,
                        typename FeatureImageType::Pointer &)
  {
    m_Canny->SetInput(feature);
  }
};
} // end namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkCannySegmentationLevelSetFunction.hxx"
#endif

#endif