/usr/include/ITK-4.9/itkGradientDescentOptimizerv4.hxx is in libinsighttoolkit4-dev 4.9.0-4ubuntu1.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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*
* Copyright Insight Software Consortium
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0.txt
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*
*=========================================================================*/
#ifndef itkGradientDescentOptimizerv4_hxx
#define itkGradientDescentOptimizerv4_hxx
#include "itkGradientDescentOptimizerv4.h"
namespace itk
{
/**
* Default constructor
*/
template<typename TInternalComputationValueType>
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::GradientDescentOptimizerv4Template()
{
this->m_LearningRate = NumericTraits<TInternalComputationValueType>::OneValue();
this->m_MinimumConvergenceValue = 1e-8;
this->m_ReturnBestParametersAndValue = false;
this->m_PreviousGradient.Fill( NumericTraits<TInternalComputationValueType>::ZeroValue() );
}
/**
* Destructor
*/
template<typename TInternalComputationValueType>
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::~GradientDescentOptimizerv4Template()
{}
/**
*PrintSelf
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::PrintSelf(std::ostream & os, Indent indent) const
{
Superclass::PrintSelf(os, indent);
os << indent << "Learning rate:" << this->m_LearningRate << std::endl;
os << indent << "MaximumStepSizeInPhysicalUnits: "
<< this->m_MaximumStepSizeInPhysicalUnits << std::endl;
os << indent << "DoEstimateLearningRateAtEachIteration: "
<< this->m_DoEstimateLearningRateAtEachIteration << std::endl;
os << indent << "DoEstimateLearningRateOnce: "
<< this->m_DoEstimateLearningRateOnce << std::endl;
}
/**
* Start and run the optimization
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::StartOptimization( bool doOnlyInitialization )
{
/* Must call the superclass version for basic validation and setup */
Superclass::StartOptimization( doOnlyInitialization );
if( this->m_ReturnBestParametersAndValue )
{
this->m_BestParameters = this->GetCurrentPosition( );
this->m_CurrentBestValue = NumericTraits< MeasureType >::max();
}
this->m_CurrentIteration = 0;
if( ! doOnlyInitialization )
{
this->ResumeOptimization();
}
}
/**
* StopOptimization
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::StopOptimization(void)
{
if( this->m_ReturnBestParametersAndValue )
{
this->m_Metric->SetParameters( this->m_BestParameters );
this->m_CurrentMetricValue = this->m_CurrentBestValue;
}
Superclass::StopOptimization();
}
/**
* Resume optimization.
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::ResumeOptimization()
{
this->m_StopConditionDescription.str("");
this->m_StopConditionDescription << this->GetNameOfClass() << ": ";
this->InvokeEvent( StartEvent() );
this->m_Stop = false;
while( ! this->m_Stop )
{
// Do not run the loop if the maximum number of iterations is reached or its value is zero.
if ( this->m_CurrentIteration >= this->m_NumberOfIterations )
{
this->m_StopConditionDescription << "Maximum number of iterations (" << this->m_NumberOfIterations << ") exceeded.";
this->m_StopCondition = Superclass::MAXIMUM_NUMBER_OF_ITERATIONS;
this->StopOptimization();
break;
}
// Save previous value with shallow swap that will be used by child optimizer.
swap( this->m_PreviousGradient, this->m_Gradient );
/* Compute metric value/derivative. */
try
{
/* m_Gradient will be sized as needed by metric. If it's already
* proper size, no new allocation is done. */
this->m_Metric->GetValueAndDerivative( this->m_CurrentMetricValue, this->m_Gradient );
}
catch ( ExceptionObject & err )
{
this->m_StopCondition = Superclass::COSTFUNCTION_ERROR;
this->m_StopConditionDescription << "Metric error during optimization";
this->StopOptimization();
// Pass exception to caller
throw err;
}
/* Check if optimization has been stopped externally.
* (Presumably this could happen from a multi-threaded client app?) */
if ( this->m_Stop )
{
this->m_StopConditionDescription << "StopOptimization() called";
break;
}
/* Check the convergence by WindowConvergenceMonitoringFunction.
*/
if ( this->m_UseConvergenceMonitoring )
{
this->m_ConvergenceMonitoring->AddEnergyValue( this->m_CurrentMetricValue );
try
{
this->m_ConvergenceValue = this->m_ConvergenceMonitoring->GetConvergenceValue();
if (this->m_ConvergenceValue <= this->m_MinimumConvergenceValue)
{
this->m_StopConditionDescription << "Convergence checker passed at iteration " << this->m_CurrentIteration << ".";
this->m_StopCondition = Superclass::CONVERGENCE_CHECKER_PASSED;
this->StopOptimization();
break;
}
}
catch(std::exception & e)
{
std::cerr << "GetConvergenceValue() failed with exception: " << e.what() << std::endl;
}
}
/* Advance one step along the gradient.
* This will modify the gradient and update the transform. */
this->AdvanceOneStep();
/* Store best value and position */
if ( this->m_ReturnBestParametersAndValue && this->m_CurrentMetricValue < this->m_CurrentBestValue )
{
this->m_CurrentBestValue = this->m_CurrentMetricValue;
this->m_BestParameters = this->GetCurrentPosition( );
}
/* Update and check iteration count */
this->m_CurrentIteration++;
} //while (!m_Stop)
}
/**
* Advance one Step following the gradient direction
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::AdvanceOneStep()
{
itkDebugMacro("AdvanceOneStep");
/* Begin threaded gradient modification.
* Scale by gradient scales, then estimate the learning
* rate if options are set to (using the scaled gradient),
* then modify by learning rate. The m_Gradient variable
* is modified in-place. */
this->ModifyGradientByScales();
this->EstimateLearningRate();
this->ModifyGradientByLearningRate();
try
{
/* Pass graident to transform and let it do its own updating */
this->m_Metric->UpdateTransformParameters( this->m_Gradient );
}
catch ( ExceptionObject & err )
{
this->m_StopCondition = Superclass::UPDATE_PARAMETERS_ERROR;
this->m_StopConditionDescription << "UpdateTransformParameters error";
this->StopOptimization();
// Pass exception to caller
throw err;
}
this->InvokeEvent( IterationEvent() );
}
/**
* Modify the gradient by scales and weights over a given index range.
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::ModifyGradientByScalesOverSubRange( const IndexRangeType& subrange )
{
const ScalesType& scales = this->GetScales();
const ScalesType& weights = this->GetWeights();
ScalesType factor( scales.Size() );
if( this->GetWeightsAreIdentity() )
{
for( SizeValueType i=0; i < factor.Size(); i++ )
{
factor[i] = NumericTraits<typename ScalesType::ValueType>::OneValue() / scales[i];
}
}
else
{
for( SizeValueType i=0; i < factor.Size(); i++ )
{
factor[i] = weights[i] / scales[i];
}
}
/* Loop over the range. It is inclusive. */
for ( IndexValueType j = subrange[0]; j <= subrange[1]; j++ )
{
// scales is checked during StartOptmization for values <=
// machine epsilon.
// Take the modulo of the index to handle gradients from transforms
// with local support. The gradient array stores the gradient of local
// parameters at each local index with linear packing.
IndexValueType index = j % scales.Size();
this->m_Gradient[j] = this->m_Gradient[j] * factor[index];
}
}
/**
* Modify the gradient by learning rate over a given index range.
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::ModifyGradientByLearningRateOverSubRange( const IndexRangeType& subrange )
{
/* Loop over the range. It is inclusive. */
for ( IndexValueType j = subrange[0]; j <= subrange[1]; j++ )
{
this->m_Gradient[j] = this->m_Gradient[j] * this->m_LearningRate;
}
}
/**
* Estimate the learning rate.
*/
template<typename TInternalComputationValueType>
void
GradientDescentOptimizerv4Template<TInternalComputationValueType>
::EstimateLearningRate()
{
if ( this->m_ScalesEstimator.IsNull() )
{
return;
}
if ( this->m_DoEstimateLearningRateAtEachIteration ||
(this->m_DoEstimateLearningRateOnce && this->m_CurrentIteration == 0) )
{
TInternalComputationValueType stepScale
= this->m_ScalesEstimator->EstimateStepScale(this->m_Gradient);
if (stepScale <= NumericTraits<TInternalComputationValueType>::epsilon())
{
this->m_LearningRate = NumericTraits<TInternalComputationValueType>::OneValue();
}
else
{
this->m_LearningRate = this->m_MaximumStepSizeInPhysicalUnits / stepScale;
}
}
}
}//namespace itk
#endif
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