libinsighttoolkit4-dev 4.9.0-4ubuntu1 / usr / include / ITK-4.9 / itkImageModelEstimatorBase.h

/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkImageModelEstimatorBase_h
#define itkImageModelEstimatorBase_h

#include "itkLightProcessObject.h"

namespace itk
{
/** \class ImageModelEstimatorBase
 * \brief Base class for model estimation from images used for classification.
 *
 * itkImageModelEstimatorBase is the base class for the ImageModelEstimator
 * objects. It provides the basic function definitions that are inherent to
 * ImageModelEstimator objects.
 *
 * This is the SuperClass for the ImageModelEstimator framework. This is an
 * abstract class defining an interface for all such objects
 * available through the ImageModelEstimator framework in the ITK toolkit.
 *
 * The basic functionality of the ImageModelEstimator framework base class is to
 * generate the models used in classification applications. It requires input
 * images and a training image to be provided by the user.
 * This object supports data handling of multiband images. The object
 * accepts the input image in vector format only, where each pixel is a
 * vector and each element of the vector corresponds to an entry from
 * 1 particular band of a multiband dataset. A single band image is treated
 * as a vector image with a single element for every vector. The classified
 * image is treated as a single band scalar image.
 *
 * EstimateModels() is a pure virtual function making this an abstract class.
 * The template parameter is the type of membership function the
 * ImageModelEstimator populates.
 *
 * A membership function represents a specific knowledge about
 * a class. In other words, it should tell us how "likely" is that a
 * measurement vector (pattern) belong to the class.
 *
 * As the method name indicates, you can have more than one membership
 * function. One for each classes. The order of the membership
 * calculator becomes the class label for the class that is represented
 * by the membership calculator.
 *
 * \ingroup ClassificationFilters
 * \ingroup ITKClassifiers
 */
template< typename TInputImage,
          typename TMembershipFunction >
class ImageModelEstimatorBase:public LightProcessObject
{
public:
  /** Standard class typedefs. */
  typedef ImageModelEstimatorBase    Self;
  typedef LightProcessObject         Superclass;
  typedef SmartPointer< Self >       Pointer;
  typedef SmartPointer< const Self > ConstPointer;

  /** Run-time type information (and related methods). */
  itkTypeMacro(ImageModelEstimatorBase, LightProcessObject);

  /** Set the number of classes. */
  itkSetMacro(NumberOfModels, unsigned int);

  /** Get the number of classes. */
  itkGetConstReferenceMacro(NumberOfModels, unsigned int);

  /** Type definitions for the membership function . */
  typedef typename TMembershipFunction::Pointer MembershipFunctionPointer;

  typedef std::vector< MembershipFunctionPointer >
  MembershipFunctionPointerVector;

  /** Type definitions for the training image. */
  typedef          TInputImage          InputImageType;
  typedef typename TInputImage::Pointer InputImagePointer;

  /** Type definitions for the training image. */
  //typedef typename TTrainingImage::Pointer TrainingImagePointer;

  /** Get/Set the input image. */
  itkSetObjectMacro(InputImage, InputImageType);
  itkGetModifiableObjectMacro(InputImage, InputImageType);

  /** Set the classified image. */
  void SetMembershipFunctions(MembershipFunctionPointerVector
                              membershipFunctions)
  {
    m_MembershipFunctions = membershipFunctions;
  }

  /** Method to get mean */
  const MembershipFunctionPointerVector GetMembershipFunctions() const
  {
    return m_MembershipFunctions;
  }

  /** Method to number of membership functions */
  unsigned int GetNumberOfMembershipFunctions()
  {
    return static_cast< unsigned int >( m_MembershipFunctions.size() );
  }

  /** Method to reset the membership function mean */
  void DeleteAllMembershipFunctions()
  {
    m_MembershipFunctions.resize(0);
  }

  /** Stores a MembershipCalculator of a class in its internal vector */
  unsigned int AddMembershipFunction(MembershipFunctionPointer function);

  /** Define a virtual function to perform model generation from the input data
   */
  void Update();

protected:
  ImageModelEstimatorBase();
  ~ImageModelEstimatorBase();
  virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;

  virtual void GenerateData() ITK_OVERRIDE;

private:

  ImageModelEstimatorBase(const Self &) ITK_DELETE_FUNCTION;
  void operator=(const Self &) ITK_DELETE_FUNCTION;

  unsigned int m_NumberOfModels;

  /** Container to hold the membership functions */
  MembershipFunctionPointerVector m_MembershipFunctions;

  /**Container for holding the training image */
  InputImagePointer m_InputImage;

  /** The core virtual function to perform modelling of the input data */
  virtual void EstimateModels() = 0;
}; // class ImageModelEstimator
} // namespace itk

#ifndef ITK_MANUAL_INSTANTIATION
#include "itkImageModelEstimatorBase.hxx"
#endif

#endif