libinsighttoolkit4-dev 4.9.0-4ubuntu1 / usr / include / ITK-4.9 / itkMetaArrayWriter.h

/*=========================================================================
 *
 *  Copyright Insight Software Consortium
 *
 *  Licensed under the Apache License, Version 2.0 (the "License");
 *  you may not use this file except in compliance with the License.
 *  You may obtain a copy of the License at
 *
 *         http://www.apache.org/licenses/LICENSE-2.0.txt
 *
 *  Unless required by applicable law or agreed to in writing, software
 *  distributed under the License is distributed on an "AS IS" BASIS,
 *  WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 *  See the License for the specific language governing permissions and
 *  limitations under the License.
 *
 *=========================================================================*/
#ifndef itkMetaArrayWriter_h
#define itkMetaArrayWriter_h
#include "ITKIOMetaExport.h"

#include "itkLightProcessObject.h"
#include "itkArray.h"
#include "itkCovariantVector.h"
#include "itkVariableLengthVector.h"
#include "metaArray.h"

namespace itk
{
class ITKIOMeta_EXPORT MetaArrayWriter:public LightProcessObject
{
public:

  /** SmartPointer typedef support */
  typedef MetaArrayWriter    Self;
  typedef LightProcessObject Superclass;

  typedef SmartPointer< Self >       Pointer;
  typedef SmartPointer< const Self > ConstPointer;

  /** Method for creation through the object factory */
  itkNewMacro(Self);

  /** Run-time type information (and related methods). */
  itkTypeMacro(MetaArrayWriter, LightProcessObject);

  /** Set the filename  */
  itkSetStringMacro(FileName);

  /** Get the filename */
  itkGetStringMacro(FileName);

  /** Set the filename to which the data is written
   *    Optional param - use if header and data should be
   *      in separate files.  */
  itkSetStringMacro(DataFileName);

  /** Get the filename to which the data will be written */
  itkGetStringMacro(DataFileName);

  /** Set the writer to store the array as binary data */
  itkSetMacro(Binary, bool);
  /** Returns true if the file to be produced will store the data in binary
   *    (instead of ascii) format */
  itkGetConstMacro(Binary, bool);

  /** Set the input itk Array to write */
  template< typename TValue >
  void SetInput(MET_ValueEnumType _metaElementType,
                const Array< TValue > *_array)
  {
    m_Buffer = (const void *)( _array->data_block() );
    m_MetaArray.InitializeEssential(_array->Size(),
                                    _metaElementType);
  }

  /** Set the input itk FixedArray to write */
  template< typename TValue, unsigned int VLength >
  void SetInput(MET_ValueEnumType _metaElementType,
                const FixedArray< TValue, VLength > *_array)
  {
    m_Buffer = (const void *)( _array->GetDataPointer() );
    m_MetaArray.InitializeEssential(VLength,
                                    _metaElementType);
  }

  /** Set the input itk Vector to write */
  template< typename TValue, unsigned int VLength >
  void SetInput(MET_ValueEnumType _metaElementType,
                const Vector< TValue, VLength > *_vector)
  {
    m_Buffer = (const void *)( _vector->GetDataPointer() );
    m_MetaArray.InitializeEssential(VLength,
                                    _metaElementType);
  }

  /** Set the input itk CovariantVector to write */
  template< typename TValue, unsigned int VLength >
  void SetInput(MET_ValueEnumType _metaElementType,
                const CovariantVector< TValue, VLength > *_vector)
  {
    m_Buffer = (const void *)( _vector->GetDataPointer() );
    m_MetaArray.InitializeEssential(VLength,
                                    _metaElementType);
  }

  /** Set the input itk VariableLengthVector to write */
  template< typename TValue >
  void SetInput(MET_ValueEnumType _metaElementType,
                const VariableLengthVector< TValue > *_vector)
  {
    m_Buffer = (const void *)( _vector->GetDataPointer() );
    m_MetaArray.InitializeEssential(_vector->Size(),
                                    _metaElementType);
  }

  /** Copies the elements from an array of arrays into the output
   *    buffer.   Requires all sub-arrays to have the same length.
   *    length of the major array is the "length" of the array, while
   *    the length of the sub-arrays is the "number of channels" at each
   *    array position.   Expected form itk::Array< itk::Array< * > >.
   *    May work for other sub-array-types that define the [] operator and the
   *    GetSize() function.  */
  template< typename TValue >
  void SetMultiChannelInput(MET_ValueEnumType _metaElementType,
                            int ,
                            const Array< TValue > *_array)
  {
    int rows = _array->GetSize();
    int cols = ( *_array )[0].GetSize();

    m_MetaArray.InitializeEssential(rows,
                                    _metaElementType,
                                    cols,
                                    ITK_NULLPTR,
                                    true,
                                    true);
    m_Buffer = m_MetaArray.ElementData();
    for ( int i = 0; i < rows; i++ )
      {
      for ( int j = 0; j < cols; j++ )
        {
        m_MetaArray.ElementData( i * cols + j, (double)( ( *_array )[i][j] ) );
        }
      }
  }

  /** Set/Get the precision of the writing */
  itkSetMacro(Precision, unsigned int);
  itkGetConstMacro(Precision, unsigned int);

  /** Set the data type written to the file */
  void ConvertTo(MET_ValueEnumType _metaElementType);

  /** Write out the array */
  void Update();

protected:

  MetaArrayWriter();
  virtual ~MetaArrayWriter();
  virtual void PrintSelf(std::ostream & os, Indent indent) const ITK_OVERRIDE;

private:

  bool m_Binary;

  unsigned int m_Precision;

  std::string m_FileName;
  std::string m_DataFileName;

  MetaArray m_MetaArray;

  const void *m_Buffer;
};
} // namespace itk

#endif // itkMetaArrayWriter_h