/usr/include/linbox/util/matrix-stream.inl is in liblinbox-dev 1.3.2-1.1build2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
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*
*
*
* ========LICENCE========
* This file is part of the library LinBox.
*
* LinBox is free software: you can redistribute it and/or modify
* it under the terms of the GNU Lesser General Public
* License as published by the Free Software Foundation; either
* version 2.1 of the License, or (at your option) any later version.
*
* This library is distributed in the hope that it will be useful,
* but WITHOUT ANY WARRANTY; without even the implied warranty of
* MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
* Lesser General Public License for more details.
*
* You should have received a copy of the GNU Lesser General Public
* License along with this library; if not, write to the Free Software
* Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA
* ========LICENCE========
*/
#ifndef __LINBOX_matrix_stream_INL
#define __LINBOX_matrix_stream_INL
#include "linbox/util/formats/matrix-stream-readers.h"
namespace LinBox
{
template<class Field>
bool MatrixStream<Field>::readWhiteSpace()
{
char c;
while(in.get(c)) {
if (isspace(c))
switch(c) {
case '\n': ++lineNumber; break;
case '\r': if( in.peek() != '\n' ) ++lineNumber; break;
}
else {
in.putback(c);
return true;
}
}
return false; // because eof or read error.
}
template<class Field>
void MatrixStreamReader<Field>::saveTriple(size_t m, size_t n, const Element& v )
{
static std::pair<std::pair<size_t,size_t>,Element> temp;
temp.first.first = m;
temp.first.second = n;
temp.second = v;
savedTriples.push(temp);
}
template<class Field>
MatrixStreamError MatrixStreamReader<Field>::init
(const char* firstLine, std::istream* i, MatrixStream<Field>* m )
{
if( !i || !m || !firstLine ) throw "Bad istream or MatrixStream";
sin = i;
ms = m;
return initImpl(firstLine);
}
template<class Field>
MatrixStreamError MatrixStreamReader<Field>::nextTriple
(size_t& m, size_t& n, Element& v)
{
if( savedTriples.size() == 0 ) {
if( atEnd ) {
if( lastError <= GOOD ) lastError = END_OF_MATRIX;
return lastError;
}
if( lastError > GOOD ) return lastError;
lastError = nextTripleImpl(m,n,v);
return lastError;
}
m = savedTriples.front().first.first;
n = savedTriples.front().first.second;
v = savedTriples.front().second;
savedTriples.pop();
return GOOD;
}
template<class Field>
MatrixStreamError MatrixStreamReader<Field>::getArray
(std::vector<Element> &array)
{
MatrixStreamError mse = GOOD;
size_t c = 0,loc,i,j;
Element v;
while( true ) {
mse = nextTriple(i,j,v);
if( mse > GOOD ) break;
if( i > 0 ) {
mse = getColumns(c);
if( mse > GOOD ) break;
}
loc = i*c+j;
if( loc >= array.size() )
array.resize(c ? (i+1)*c : loc+1);
array[loc] = v;
}
if( mse > END_OF_MATRIX ) return mse;
mse = getRows(j);
if( mse > END_OF_MATRIX ) return mse;
if( array.size() < j*c ) array.resize(j*c);
return GOOD;
}
template<class Field>
MatrixStreamError MatrixStreamReader<Field>::saveNext()
{
if( lastError > GOOD ) return lastError;
if( atEnd ) {
lastError = END_OF_MATRIX;
return lastError;
}
size_t m, n;
Element v;
lastError = nextTripleImpl(m,n,v);
if( lastError <= GOOD ) saveTriple(m,n,v);
return lastError;
}
template<class Field>
MatrixStreamError MatrixStreamReader<Field>::getRows(size_t& m)
{
MatrixStreamError toRet = GOOD;
while( !knowM ) {
if( atEnd ) return END_OF_MATRIX;
toRet = saveNext();
if( toRet > GOOD ) return toRet;
}
m = _m;
return toRet;
}
template<class Field>
MatrixStreamError MatrixStreamReader<Field>::getColumns(size_t& n)
{
MatrixStreamError toRet = GOOD;
while( !knowN ) {
if( atEnd ) return END_OF_MATRIX;
toRet = saveNext();
if( toRet > GOOD ) return toRet;
}
n = _n;
return toRet;
}
template<class Field>
void MatrixStream<Field>::init()
{
lineNumber = 1;
//Skip comments
readWhiteSpace();
while( !in.eof() && in.peek() == '#' ) {
char c;
while( in.get(c) ) {
if( c == '\n' ) break;
if( c == '\r' ) {
if( in.peek() == '\n' )
in.get();
break;
}
}
++lineNumber;
readWhiteSpace();
}
//Get first line
firstLine = new char[FIRST_LINE_LIMIT];
in.getline(firstLine,FIRST_LINE_LIMIT);
firstLine[in.gcount()] = '\0';
//Initialize readers
currentError = NO_FORMAT;
__MATRIX_STREAM_READERDEFS
delete[] firstLine;
if( !reader ) return;
else if( currentError > GOOD )
errorLineNumber = lineNumber;
}
template<class Field>
void MatrixStream<Field>::addReader( MatrixStreamReader<Field>* r )
{
if( currentError == GOOD ) {
delete r;
return;
}
MatrixStreamError mse = r->init( firstLine, &in, this );
if( mse < currentError ) {
if( reader ) delete reader;
reader = r;
currentError = mse;
}
}
template<class Field>
MatrixStream<Field>::MatrixStream(const Field& fld, std::istream& i ) :
reader(NULL),in(i),readAnythingYet(false),f(fld)
{
init();
if( currentError > GOOD ) throw currentError;
}
template<class Field>
void MatrixStream<Field>::newmatrix()
{
readAnythingYet = false;
init();
if( currentError > GOOD ) throw currentError;
}
template<class Field>
bool MatrixStream<Field>::nextTriple(size_t& m, size_t& n, Element& v)
{
if( currentError > GOOD ) return false;
do {
currentError = reader->nextTriple(m,n,v);
} while( f.isZero(v) && currentError == GOOD );
if( currentError != GOOD ) {
errorLineNumber = lineNumber;
return false;
}
readAnythingYet = true;
return true;
}
template<class Field>
bool MatrixStream<Field>::getArray(std::vector<Element> &array)
{
if( currentError > GOOD || readAnythingYet ) return false;
currentError = reader->getArray(array);
if( currentError != GOOD ) {
errorLineNumber = lineNumber;
return false;
}
readAnythingYet = true;
return true;
}
template<class Field>
bool MatrixStream<Field>::getRows(size_t& m)
{
MatrixStreamError mse = reader->getRows(m);
if( currentError > GOOD )
return (mse == GOOD);
else if( mse > GOOD ) {
currentError = mse;
errorLineNumber = lineNumber;
return false;
}
else return true;
}
template<class Field>
bool MatrixStream<Field>::getColumns(size_t& n)
{
MatrixStreamError mse = reader->getColumns(n);
if( currentError > GOOD )
return (mse == GOOD);
else if( mse > GOOD ) {
currentError = mse;
errorLineNumber = lineNumber;
return false;
}
else return true;
}
template<class Field>
bool MatrixStream<Field>::getDimensions( size_t& m, size_t& n )
{
return( getRows(m) && getColumns(n) );
}
template<class Field>
MatrixStreamError MatrixStream<Field>::reportError
( const char* func, int line ) const
{
std::cerr << std::endl
<< "ERROR (" << func << ":" << line << "): "
<< "Problem reading matrix:" << std::endl;
switch( getError() ) {
case END_OF_MATRIX:
std::cerr << "There is no more data in the matrix file.";
break;
case END_OF_FILE:
std::cerr << "An EOF was encountered unexpectedly in reading the data.";
break;
case BAD_FORMAT:
std::cerr << "There is a formatting error in the matrix.";
break;
case NO_FORMAT:
std::cerr << "The matrix format is not recognized or supported.";
break;
case GOOD: break;
default: break;
}
std::cerr << std::endl << "At line number: " << lineNumber << std::endl
<< "Matrix format is " << getFormat() << std::endl;
return currentError;
}
template<class Field>
int MatrixStream<Field>::getLineNumber() const {
if( currentError > GOOD ) return errorLineNumber;
else return lineNumber;
}
} // end of namespace LinBox
#endif // __LINBOX_matrix_stream_INL
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