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/usr/include/pbdata/reads/PulseFileImpl.hpp is in libpbdata-dev 0~20151014+gitbe5d1bf-2.

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#ifndef _BLASR_PULSE_FILE_IMPL_HPP_
#define _BLASR_PULSE_FILE_IMPL_HPP_

#include "utils.hpp"

template<typename T_FieldType>
    void PulseFile::StoreField(std::vector<T_FieldType> &source, int *basToPlsIndex, T_FieldType *dest, int destLength) {
    int i;
    for (i = 0 ; i < destLength; i++) {
    dest[i] = source[basToPlsIndex[i]];
    }
}

template <typename T>
    bool PulseFile::Realloc(T *&ptr, int length) {
    if (ptr != NULL) {
    delete[] ptr;
    }
    ptr = ProtectedNew<T>(length);
    return ptr != NULL;
}

#endif