This file is indexed.

/usr/include/shogun/features/DirectorDotFeatures.h is in libshogun-dev 3.2.0-7.3build4.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
/*
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 3 of the License, or
 * (at your option) any later version.
 *
 * Copyright (C) 2012 Soeren Sonnenburg
 */

#ifndef _DIRECTORDOTFEATURES_H___
#define _DIRECTORDOTFEATURES_H___

#include <shogun/lib/config.h>

#ifdef USE_SWIG_DIRECTORS
#include <shogun/lib/common.h>
#include <shogun/features/Features.h>
#include <shogun/features/DotFeatures.h>

namespace shogun
{
/** @brief DirectorDotFeatures that support dot products among other operations and can be overloaded in modular interfaces.
 */
#define IGNORE_IN_CLASSLIST
IGNORE_IN_CLASSLIST class CDirectorDotFeatures : public CDotFeatures
{
	public:

		/** constructor
		 *
		 * @param size cache size
		 */
		CDirectorDotFeatures(int32_t size=0) : CDotFeatures(size)
		{
		}

		virtual ~CDirectorDotFeatures() { }

		/** get number of examples/vectors, possibly corresponding to the current subset
		 *
		 * abstract base method
		 *
		 * @return number of examples/vectors (possibly of subset, if implemented)
		 */
		virtual int32_t get_num_vectors() const
		{
			SG_NOTIMPLEMENTED
			return 0;
		}


		/** obtain the dimensionality of the feature space
		 *
		 * (not mix this up with the dimensionality of the input space, usually
		 * obtained via get_num_features())
		 *
		 * @return dimensionality
		 */
		virtual int32_t get_dim_feature_space() const
		{
			SG_NOTIMPLEMENTED
			return 0;
		}

		/** compute dot product between vector1 and vector2,
		 * appointed by their indices
		 *
		 * @param vec_idx1 index of first vector
		 * @param df DotFeatures (of same kind) to compute dot product with
		 * @param vec_idx2 index of second vector
		 */
		virtual float64_t dot(int32_t vec_idx1, CDotFeatures* df, int32_t vec_idx2)
		{
			SG_NOTIMPLEMENTED
			return 0;
		}

		/** compute dot product between vector1 and a dense vector
		 *
		 * @param vec_idx1 index of first vector
		 * @param vec2 dense vector
		 */
		virtual float64_t dense_dot_sgvec(int32_t vec_idx1, const SGVector<float64_t> vec2)
		{
			SG_NOTIMPLEMENTED
			return 0;
		}

		/** add vector 1 multiplied with alpha to dense vector2
		 *
		 * @param alpha scalar alpha
		 * @param vec_idx1 index of first vector
		 * @param vec2 pointer to real valued vector
		 * @param vec2_len length of real valued vector
		 * @param abs_val if true add the absolute value
		 */
		virtual void add_to_dense_sgvec(float64_t alpha, int32_t vec_idx1, SGVector<float64_t> vec2, bool abs_val=false)
		{
			SG_NOTIMPLEMENTED
		}

		/** compute dot product between vector1 and a dense vector
		 *
		 * @param vec_idx1 index of first vector
		 * @param vec2 pointer to real valued vector
		 * @param vec2_len length of real valued vector
		 */
		virtual float64_t dense_dot(int32_t vec_idx1, const float64_t* vec2, int32_t vec2_len)
		{
			return dense_dot_sgvec(vec_idx1, SGVector<float64_t>((float64_t*) vec2, vec2_len, false));
		}

		/** add vector 1 multiplied with alpha to dense vector2
		 *
		 * @param alpha scalar alpha
		 * @param vec_idx1 index of first vector
		 * @param vec2 pointer to real valued vector
		 * @param vec2_len length of real valued vector
		 * @param abs_val if true add the absolute value
		 */
		virtual void add_to_dense_vec(float64_t alpha, int32_t vec_idx1, float64_t* vec2, int32_t vec2_len, bool abs_val=false)
		{
			add_to_dense_sgvec(alpha, vec_idx1, SGVector<float64_t>(vec2, vec2_len, false), abs_val);
		}

		/** Compute the dot product for a range of vectors. This function makes use of dense_dot
		 * alphas[i] * sparse[i]^T * w + b
		 *
		 * @param output result for the given vector range
		 * @param start start vector range from this idx
		 * @param stop stop vector range at this idx
		 * @param alphas scalars to multiply with, may be NULL
		 * @param vec dense vector to compute dot product with
		 * @param dim length of the dense vector
		 * @param b bias
		 *
		 * note that the result will be written to output[0...(stop-start-1)]
		 */
		virtual void dense_dot_range(float64_t* output, int32_t start, int32_t stop, float64_t* alphas, float64_t* vec, int32_t dim, float64_t b)
		{
			CDotFeatures::dense_dot_range(output, start, stop, alphas, vec, dim, b);
		}

		/** Compute the dot product for a subset of vectors. This function makes use of dense_dot
		 * alphas[i] * sparse[i]^T * w + b
		 *
		 * @param sub_index index for which to compute outputs
		 * @param num length of index
		 * @param output result for the given vector range
		 * @param alphas scalars to multiply with, may be NULL
		 * @param vec dense vector to compute dot product with
		 * @param dim length of the dense vector
		 * @param b bias
		 */
		virtual void dense_dot_range_subset(int32_t* sub_index, int32_t num,
				float64_t* output, float64_t* alphas, float64_t* vec, int32_t dim, float64_t b)
		{
			CDotFeatures::dense_dot_range_subset(sub_index, num, output, alphas, vec, dim, b);
		}

		/** get number of non-zero features in vector
		 *
		 * (in case accurate estimates are too expensive overestimating is OK)
		 *
		 * @param num which vector
		 * @return number of sparse features in vector
		 */
		virtual int32_t get_nnz_features_for_vector(int32_t num)
		{
			SG_NOTIMPLEMENTED
			return 0;
		}

		/** iterate over the non-zero features
		 *
		 * call get_feature_iterator first, followed by get_next_feature and
		 * free_feature_iterator to cleanup
		 *
		 * @param vector_index the index of the vector over whose components to
		 *			iterate over
		 * @return feature iterator (to be passed to get_next_feature)
		 */
		virtual void* get_feature_iterator(int32_t vector_index)
		{
			SG_NOTIMPLEMENTED
			return NULL;
		}

		/** iterate over the non-zero features
		 *
		 * call this function with the iterator returned by get_feature_iterator
		 * and call free_feature_iterator to cleanup
		 *
		 * @param index is returned by reference (-1 when not available)
		 * @param value is returned by reference
		 * @param iterator as returned by get_feature_iterator
		 * @return true if a new non-zero feature got returned
		 */
		virtual bool get_next_feature(int32_t& index, float64_t& value, void* iterator)
		{
			SG_NOTIMPLEMENTED
			return false;
		}

		/** clean up iterator
		 * call this function with the iterator returned by get_feature_iterator
		 *
		 * @param iterator as returned by get_feature_iterator
		 */
		virtual void free_feature_iterator(void* iterator)
		{
			SG_NOTIMPLEMENTED
		}

		/** get mean
		 *
		 * @return mean returned
		 */
		virtual SGVector<float64_t> get_mean()
		{
			return CDotFeatures::get_mean();
		}

		/** get covariance
		 *
		 * @return covariance
		 */
		virtual SGMatrix<float64_t> get_cov()
		{
			return CDotFeatures::get_cov();
		}

		/** get feature type
		 *
		 * abstract base method
		 *
		 * @return templated feature type
		 */
		virtual EFeatureType get_feature_type() const
		{
			return F_ANY;
		}

		/** duplicate feature object
		 *
		 * abstract base method
		 *
		 * @return feature object
		 */
		virtual CFeatures* duplicate() const
		{
			SG_NOTIMPLEMENTED
			return NULL;
		}

		/** get feature class
		 *
		 * abstract base method
		 *
		 * @return feature class like STRING, SIMPLE, SPARSE...
		 */
		virtual EFeatureClass get_feature_class() const
		{
			return C_DIRECTOR_DOT;
		}

		/** add preprocessor
		 *
		 * @param p preprocessor to set
		 */
		virtual void add_preprocessor(CPreprocessor* p)
		{
			CFeatures::add_preprocessor(p);
		}

		/** delete preprocessor from list
		 * caller has to clean up returned preproc
		 *
		 * @param num index of preprocessor in list
		 */
		virtual void del_preprocessor(int32_t num)
		{
			CFeatures::del_preprocessor(num);
		}

		/** in case there is a feature matrix allow for reshaping
		 *
		 * NOT IMPLEMENTED!
		 *
		 * @param num_features new number of features
		 * @param num_vectors new number of vectors
		 * @return if reshaping was successful
		 */
		virtual bool reshape(int32_t num_features, int32_t num_vectors)
		{
			SG_NOTIMPLEMENTED
			return false;
		}

		/** load features from file
		 *
		 * @param loader File object via which data shall be loaded
		 */
		virtual void load(CFile* loader)
		{
			CFeatures::load(loader);
		}

		/** save features to file
		 *
		 * @param writer File object via which data shall be saved
		 */
		virtual void save(CFile* writer)
		{
			CFeatures::save(writer);
		}

		/** adds a subset of indices on top of the current subsets (possibly
		 * subset o subset. Calls subset_changed_post() afterwards
		 *
		 * @param subset subset of indices to add
		 * */
		virtual void add_subset(SGVector<index_t> subset)
		{
			CFeatures::add_subset(subset);
		}

		/** removes that last added subset from subset stack, if existing
		 * Calls subset_changed_post() afterwards */
		virtual void remove_subset()
		{
			CFeatures::remove_subset();
		}

		/** removes all subsets
		 * Calls subset_changed_post() afterwards */
		virtual void remove_all_subsets()
		{
			CFeatures::remove_all_subsets();
		}

		/** method may be overwritten to update things that depend on subset */
		virtual void subset_changed_post()
		{
			CFeatures::subset_changed_post();
		}

		/** Creates a new CFeatures instance containing copies of the elements
		 * which are specified by the provided indices.
		 *
		 * This method is needed for a KernelMachine to store its model data.
		 * NOT IMPLEMENTED!
		 *
		 * @param indices indices of feature elements to copy
		 * @return new CFeatures instance with copies of feature data
		 */
		virtual CFeatures* copy_subset(SGVector<index_t> indices)
		{
			return CFeatures::copy_subset(indices);
		}

		/** @return object name */
		virtual const char* get_name() const { return "DirectorDotFeatures"; }
};
}
#endif // USE_SWIG_DIRECTORS
#endif // _DIRECTORDOTFEATURES_H___