This file is indexed.

/usr/include/trilinos/Ifpack.h is in libtrilinos-ifpack-dev 12.4.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
/*@HEADER
// ***********************************************************************
//
//       Ifpack: Object-Oriented Algebraic Preconditioner Package
//                 Copyright (2002) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ***********************************************************************
//@HEADER
*/

#ifndef IFPACK_H
#define IFPACK_H


#include "Ifpack_ConfigDefs.h"
#include "Ifpack_Preconditioner.h"
#include "Teuchos_iostream_helpers.hpp"


#ifdef HAVE_HYPRE
#include "Ifpack_Hypre.h"
#endif


//! Ifpack: a function class to define Ifpack preconditioners.
/*!
Class Ifpack is a function class, that contains just one method:
Create(). Using Create(), users can easily define a variety of
IFPACK preconditioners.

Create requires 3 arguments:
- a std::string, indicating the preconditioner to be built;
- a pointer to an Epetra_RowMatrix, representing the matrix
  to be used to define the preconditioner;
- an interger (defaulted to 0), that specifies the amount of
  overlap among the processes.

The first argument can assume the following values:
- \c "point relaxation" : returns an instance of Ifpack_AdditiveSchwarz<Ifpack_PointRelaxation> (no Additive Schwarz in serial)
- \c "point relaxation stand-alone" : returns an instance of Ifpack_PointRelaxation (value of overlap is ignored).
- \c "block relaxation" : returns an instance of Ifpack_AdditiveSchwarz<Ifpack_BlockRelaxation> (no Additive Schwarz in serial)
- \c "block relaxation stand-alone)" : returns an instance of Ifpack_BlockRelaxation.
- \c "Amesos" : returns an instance of Ifpack_AdditiveSchwarz<Ifpack_Amesos> (no Additive Schwarz in serial)
- \c "Amesos stand-alone" : returns an instance of Ifpack_Amesos.
- \c "IC" : returns an instance of Ifpack_AdditiveSchwarz<Ifpack_IC> (no Additive Schwarz in serial)
- \c "IC stand-alone" : returns an instance of Ifpack_IC.
- \c "ICT" : returns an instance of Ifpack_AdditiveSchwarz<Ifpack_ICT> (no Additive Schwarz in serial)
- \c "ICT stand-alone" : returns an instance of Ifpack_ICT.
- \c "ILU" : returns an instance of Ifpack_AdditiveSchwarz<Ifpack_ILU> (no Additive Schwarz in serial)
- \c "ILU stand-alone" : returns an instance of Ifpack_ILU.
- \c "ILUT" : returns an instance of Ifpack_AdditiveSchwarz<Ifpack_ILUT> (no Additive Schwarz in serial)
- \c "ILUT stand-alone" : returns an instance of Ifpack_ILUT.
- otherwise, Create() returns 0.

\note Objects in stand-alone mode cannot use reordering, variable overlap, and singleton filters.
However, their construction can be slightly faster than the non stand-alone counterpart.

<P> The following fragment of code shows the
basic usage of this class.
\code
#include "Ifpack.h"

...

Ifpack Factory;

Epetra_RowMatrix* A; // A is FillComplete()'d.
std::string PrecType = "ILU"; // use incomplete LU on each process
int OverlapLevel = 1; // one row of overlap among the processes
Ifpack_Preconditioner* Prec = Factory.Create(PrecType, A, OverlapLevel);
assert (Prec != 0);

Teuchos::ParameterList List;
List.set("fact: level-of-fill", 5); // use ILU(5)

IFPACK_CHK_ERR(Prec->SetParameters(List));
IFPACK_CHK_ERR(Prec->Initialize());
IFPACK_CHK_ERR(Prec->Compute());

// now Prec can be used as AztecOO preconditioner
// like for instance
AztecOO AztecOOSolver(*Problem);

// specify solver
AztecOOSolver.SetAztecOption(AZ_solver,AZ_gmres);
AztecOOSolver.SetAztecOption(AZ_output,32);

// Set Prec as preconditioning operator
AztecOOSolver.SetPrecOperator(Prec);

// Call the solver
AztecOOSolver.Iterate(1550,1e-8);

// print information on stdout
cout << *Prec;

// delete the preconditioner
delete Prec;
\endcode

\author Marzio Sala, (formally) SNL org. 1414

\date Last updated on 25-Jan-05.
*/

class Ifpack {
public:

  /** \brief Enum for the type of preconditioner. */
  enum EPrecType {
    POINT_RELAXATION
    ,POINT_RELAXATION_STAND_ALONE
    ,BLOCK_RELAXATION
    ,BLOCK_RELAXATION_STAND_ALONE
    ,BLOCK_RELAXATION_STAND_ALONE_ILU
    ,BLOCK_RELAXATION_STAND_ALONE_ILUT
    ,BLOCK_RELAXATION_STAND_ALONE_IC
#ifdef HAVE_IFPACK_SUPERLU
    ,BLOCK_RELAXATION_STAND_ALONE_SILU
#endif
#ifdef HAVE_IFPACK_AMESOS
    ,BLOCK_RELAXATION_STAND_ALONE_AMESOS
    ,BLOCK_RELAXATION_AMESOS
    ,AMESOS
    ,AMESOS_STAND_ALONE
#endif // HAVE_IFPACK_AMESOS
    ,IC
    ,IC_STAND_ALONE
    ,ICT
    ,ICT_STAND_ALONE
    ,ILU
    ,ILU_STAND_ALONE
    ,ILUT
    ,ILUT_STAND_ALONE
#ifdef HAVE_IFPACK_SPARSKIT
    ,SPARSKIT
#endif // HAVE_IFPACK_SPARSKIT
#ifdef HAVE_IFPACK_HIPS
  ,HIPS
#endif
#ifdef HAVE_HYPRE
  ,HYPRE
#endif
#ifdef HAVE_IFPACK_SUPERLU
  ,SILU
#endif
#if defined (HAVE_IFPACK_SUPPORTGRAPH) && defined (HAVE_IFPACK_AMESOS)
    ,MSF_AMESOS
#endif
#ifdef HAVE_IFPACK_SUPPORTGRAPH
    ,MSF_IC
#endif
    ,CHEBYSHEV
    ,POLYNOMIAL
    ,KRYLOV
    ,IHSS
    ,SORA
    ,TRIDI_RELAXATION
    ,TRIDI_RELAXATION_STAND_ALONE
  };

  /** \brief . */
  static const int numPrecTypes =
    +7
#ifdef HAVE_IFPACK_AMESOS
    +4
#endif
    +8
#ifdef HAVE_IFPACK_SPARSKIT
    +1
#endif
#ifdef HAVE_IFPACK_HIPS
    +1
#endif
#ifdef HAVE_HYPRE
    +1
#endif
#ifdef HAVE_IFPACK_SUPERLU
    +2
#endif
#if defined (HAVE_IFPACK_SUPPORTGRAPH) && defined (HAVE_IFPACK_AMESOS)
    +1
#endif
#ifdef HAVE_IFPACK_SUPPORTGRAPH
    +1
#endif
    +7
    ;

  /** \brief List of the preconditioner types as enum values . */
  static const EPrecType precTypeValues[numPrecTypes];

  /** \brief List of preconditioner types as std::string values. */
  static const char* precTypeNames[numPrecTypes];

  /** \brief List of bools that determines if the preconditioner type supports
   * unsymmetric matrices. */
  static const bool supportsUnsymmetric[numPrecTypes];

  /** \brief Function that gives the std::string name for preconditioner given its
   * enumerication value. */
  static const char* toString(const EPrecType precType)
      { return precTypeNames[precType]; }

  /** \brief Creates an instance of Ifpack_Preconditioner given the enum value
   * of the preconditioner type (can not fail, no bad input possible).
   *
   * \param PrecType (In) - Enum value of preconditioner type to be created.
   *
   * \param Matrix (In) - Matrix used to define the preconditioner
   *
   * \param overlap (In) - specified overlap, defaulted to 0.
   */
  static Ifpack_Preconditioner* Create(
    EPrecType PrecType, Epetra_RowMatrix* Matrix, const int overlap = 0, bool overrideSerialDefault = false
    );

  /** \brief Creates an instance of Ifpack_Preconditioner given the std::string
   * name of the preconditioner type (can fail with bad input).
   *
   * \param PrecType (In) - String name of preconditioner type to be created.
   *
   * \param Matrix (In) - Matrix used to define the preconditioner
   *
   * \param overlap (In) - specified overlap, defaulted to 0.
   *
   * Returns <tt>0</tt> if the preconditioner with that input name does not
   * exist.  Otherwise, return a newly created preconditioner object.  Note
   * that the client is responsible for calling <tt>delete</tt> on the
   * returned object once it is finished using it!
   */
  Ifpack_Preconditioner* Create(const std::string PrecType,
                                Epetra_RowMatrix* Matrix,
                                const int overlap = 0,
                                bool overrideSerialDefault = false);

  /** \brief Sets the options in List from the command line.
   *
   * Note: If you want full support for all parameters, consider reading in a
   * parameter list from an XML file as supported by the Teuchos helper
   * function <tt>Teuchos::updateParametersFromXmlFile()</tt> or
   * <tt>Teuchos::updateParametersFromXmlStream()</tt>.
   */
  int SetParameters(int argc, char* argv[],
                    Teuchos::ParameterList& List, std::string& PrecType,
                    int& Overlap);

};


TEUCHOS_ENUM_INPUT_STREAM_OPERATOR(Ifpack::EPrecType)


#endif