/usr/include/trilinos/Ifpack_Partitioner.h is in libtrilinos-ifpack-dev 12.4.2-2.
This file is owned by root:root, with mode 0o644.
The actual contents of the file can be viewed below.
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 | /*
//@HEADER
// ***********************************************************************
//
// Ifpack: Object-Oriented Algebraic Preconditioner Package
// Copyright (2002) Sandia Corporation
//
// Under terms of Contract DE-AC04-94AL85000, there is a non-exclusive
// license for use of this work by or on behalf of the U.S. Government.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact Michael A. Heroux (maherou@sandia.gov)
//
// ***********************************************************************
//@HEADER
*/
#ifndef IFPACK_PARTITIONER_H
#define IFPACK_PARTITIONER_H
#include "Ifpack_ConfigDefs.h"
#include "Teuchos_ParameterList.hpp"
class Epetra_Comm;
class Ifpack_Graph;
class Epetra_Map;
class Epetra_BlockMap;
class Epetra_Import;
//! Ifpack_Partitioner: A class to decompose local Ifpack_Graph's.
/*!
Class Ifpack_Partitioner enables the decomposition of a local
Ifpack_Graph's. It is supposed that the graph refers to
a localized matrix (that is, a matrix that has been filtered
through Ifpack_LocalFilter).
The overloaded operator (int i) can be used to extract the local partition
ID of local row i.
The partitions created by Ifpack_Partitioner derived clased
are non-overlapping in graph sense. This means that each row
(or, more approriately, vertex)
of \c G is assigned to exactly one partition.
Partitioner can be extended using the functionalities of class
Ifpack_OverlappingPartitioner (itself derived from Ifpack_Partitioner.
This class extends the non-overlapping partitions by the required
amount of overlap, considering local nodes only (that is, this
overlap do \e not modify the overlap among the processes).
Ifpack_Partitioner is a pure virtual class. Concrete implementations
are:
- Ifpack_LinearPartitioner, which allows the decomposition of the
rows of the graph in simple consecutive chunks;
- Ifpack_METISPartitioner, which calls METIS to decompose the graph
(this requires the configuration option --enable-ifpack-metis);
- Ifpack_GreedyPartitioner, a simple greedy algorith;
- Ifpack_EquationPartitioner, which creates \c NumPDEEqns parts
(where \c NumPDEEqns is the number of equations in the linear
system). It is supposed that all the equations referring to the
same grid node are ordered consecutively. Besides, the
number of equations per node must be constant in the domain.
Generically, a constructor requires an Ifpack_Graph object.
Ifpack_Graph is a pure virtual class. Concrete implentations are:
- Ifpack_Graph_Epetra_CrsGraph, a light-weight class to wrap
Epetra_CrsGraph objects as Ifpack_Graph objects;
- Ifpack_Graph_Epetra_RowMatrix, a light-weight class to
wrap Epetra_RowMatrix objects as Ifpack_Graph objects.
<P>An example of use is an Ifpack_Partitioner derived class is as follows:
\code
#include "Ifpack_Partitioner.h"
#include "Ifpack_LinearPartitioner.h"
#include "Ifpack_Graph.h"
#include "Ifpack_Graph_Epetra_CrsGraph.h"
...
Epetra_CrsMatrix* A; // A is filled
// create the wrapper from Epetra_CrsGraph
Ifpack_Graph* Graph = new Ifpack_Graph_Epetra_CrsGraph(A);
// we aim to create non-overlapping partitions only
Ifpack_Partitioner Partitioner(Graph);
Ifpack_Partitioner* Partitioner;
Partitioner = new Ifpack_Graph_Epetra_CrsGraph(&A);
// we want 16 local parts
List.set("partitioner: local parts", 16);
// and an overlap of 0 among the local parts (default option)
List.set("partitioner: overlap", 0);
// decompose the graph
Partitioner.Create(List);
// now Graph can be deleted, as Partitioner contains all the
// necessary information to use the partitions
delete Graph;
// we can get the number of parts actually created...
int NumParts = Partitioner.NumParts();
// ... and the number of rows in each of them
for (int i = 0 ; i < NumParts ; ++i) {
cout << "rows in " << i << "=" << Partitioner.RowsInPart(i);
}
// .. and, for non-overlapping partitions only, the partition ID
// for each local row simply using:
for (int i = 0 ; i < A->NumMyRows() ; ++i)
cout << "Partition[" << i <<"] = " << Partitioner(i) << endl;
\endcode
When overlapping partitiones are created, the user can get the
row ID contained in each partition as follows:
\code
for (int i = 0 ; i < NumParts ; ++i) {
for (int j = 0 ; j < Partitioner.RowsInPart(i) ; ++j) {
cout << "Partition " << i << ", contains local row "
<< Partitioner(i,j) << endl;
}
}
\endcode
Ifpack_Partitioner is used to create the subblocks in
Ifpack_BlockJacobi, Ifpack_BlockGaussSeidel, and
Ifpack_BlockSymGaussSeidel.
\author Marzio Sala, SNL 9214.
\date Last modified on Nov-04.
*/
class Ifpack_Partitioner {
public:
//! Destructor.
virtual ~Ifpack_Partitioner() {};
//! Returns the number of computed local partitions.
virtual int NumLocalParts() const = 0;
//! Returns the overlapping level.
virtual int OverlappingLevel() const = 0;
//! Returns the local non-overlapping partition ID of the specified row.
/*! Returns the non-overlapping partition ID of the specified row.
\param
MyRow - (In) local row numbe
\return
Local ID of non-overlapping partition for \t MyRow.
*/
virtual int operator() (int MyRow) const = 0;
//! Returns the local overlapping partition ID of the j-th node in partition i.
virtual int operator() (int i, int j) const = 0;
//! Returns the number of rows contained in specified partition.
virtual int NumRowsInPart(const int Part) const = 0;
//! Copies into List the rows in the (overlapping) partition Part.
virtual int RowsInPart(const int Part, int* List) const = 0;
//! Returns a pointer to the integer vector containing the non-overlapping partition ID of each local row.
virtual const int* NonOverlappingPartition() const = 0;
//! Sets all the parameters for the partitioner.
virtual int SetParameters(Teuchos::ParameterList& List) = 0;
//! Computes the partitions. Returns 0 if successful.
virtual int Compute() = 0;
//! Returns true if partitions have been computed successfully.
virtual bool IsComputed() = 0;
//! Prints basic information about the partitioning object.
virtual std::ostream& Print(std::ostream& os) const = 0;
}; // class Ifpack_Partitioner
inline std::ostream& operator<<(std::ostream& os, const Ifpack_Partitioner& obj)
{
return(obj.Print(os));
}
#endif // IFPACK_PARTITIONER_H
|