This file is indexed.

/usr/include/trilinos/MLAPI_LoadBalanceOperator.h is in libtrilinos-ml-dev 12.4.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
#ifndef ML_LBOPERATOR_H
#define ML_LBOPERATOR_H

/*!
\file MLAPI_LoadBalanceOperator.h

\brief wraps an MLAPI operator with zero rows on some processors.

\author Michael Gee, TU Munich.

\date Last updated on July-10.
*/
/* ******************************************************************** */
/* See the file COPYRIGHT for a complete copyright notice, contact      */
/* person and disclaimer.                                               */
/* ******************************************************************** */
//#include "ml_common.h"
//#include <iostream>
//#include "ml_operator.h"
//#include "ml_epetra_utils.h"
//#include "ml_RowMatrix.h"
//#include "Teuchos_RefCountPtr.hpp"
//#include "MLAPI_Error.h"
//#include "MLAPI_Space.h"
//#include "MLAPI_MultiVector.h"
#include "MLAPI_Operator.h"
//#include "MLAPI_CompObject.h"
//#include "MLAPI_TimeObject.h"
//#include "MLAPI_Workspace.h"
//#include "MLAPI_Operator_Box.h"

namespace MLAPI {

/*!
 * \class Operator
 *
 * \brief Operator: basic class to define operators within MLAPI.
 *
 * \author Michael Gee, TU Munich.
 *
 * \date Last updated on July-10.
 */

class LoadBalanceOperator : public Operator {

public:
  //@{ \name Constructors and destructors.

  //! Default constructor.
  LoadBalanceOperator()
  {
    participate_ = true;
    mlcomm_ = NULL;
    RCPOperatorBox_ = Teuchos::null;
  }

  //! Constructor with given already computed ML_Operator pointer.
  LoadBalanceOperator(const Space& DomainSpace, const Space& RangeSpace,
           ML_Operator* Op, bool Ownership = true,
           Teuchos::RefCountPtr<ML_Operator_Box> AuxOp = Teuchos::null)
  {
    participate_ = true;
    mlcomm_ = NULL;
    Reshape(DomainSpace, RangeSpace, Op, Ownership, AuxOp);
  }

  //! Constructor with given already FillComplete()'d object.
  LoadBalanceOperator(const Space& DomainSpace, const Space& RangeSpace,
           Epetra_RowMatrix* Matrix, bool Ownership = true,
           Teuchos::RefCountPtr<ML_Operator_Box> AuxOp = Teuchos::null)
  {
    if (Matrix) participate_ = true;
    else        participate_ = false;
    mlcomm_ = NULL;
    Reshape(DomainSpace, RangeSpace, Matrix, Ownership, AuxOp);
  }

  //! Copy constructor.
  LoadBalanceOperator(const LoadBalanceOperator& RHS)
  {
    participate_       = RHS.participate_;
    if (RHS.mlcomm_ && participate_)
    {
      ML_Comm_Create(&mlcomm_);
      ML_Comm_Set_UsrComm(mlcomm_,RHS.mlcomm_->USR_comm);
    }
    DomainSpace_       = RHS.GetDomainSpace();
    RangeSpace_        = RHS.GetRangeSpace();
    ColumnSpace_       = RHS.GetColumnSpace();
    RCPOperatorBox_    = RHS.GetRCPOperatorBox();
    RCPAuxOperatorBox_ = RHS.GetRCPAuxOperatorBox();
    RCPRowMatrix_      = RHS.GetRCPRowMatrix();

    SetLabel(RHS.GetLabel());
  }


  //! Destructor.
  ~LoadBalanceOperator()
  {
    Destroy();
  }

  // @}
  // @{ \name Reshape methods

  //! Resets \c this object.
  void Reshape()
  {
    Destroy();
  }

  //! Reshape with given already computed ML_Operator pointer.
  void Reshape(const Space& DomainSpace, const Space& RangeSpace,
               ML_Operator* Op, bool Ownership = true,
               Teuchos::RefCountPtr<ML_Operator_Box> AuxOp = Teuchos::null)
  {
    StackPush();

    RangeSpace_        = RangeSpace;
    DomainSpace_       = DomainSpace;

    RCPOperatorBox_    = Teuchos::rcp(new ML_Operator_Box(Op,Ownership));
    // NOTE: Should the code crash, change the following to `false'
    bool cheap;
    if (RangeSpace_ != DomainSpace_)
      cheap = true;
    else
      cheap = false;
    RCPRowMatrix_      = Teuchos::rcp(new ML_Epetra::RowMatrix(Op,&(GetEpetra_Comm()),
                                                               false));
    RCPAuxOperatorBox_ = AuxOp;

    StackPop();
  }

  //! Reshape with given already FillComplete()'d object.
  void Reshape(const Space& DomainSpace, const Space& RangeSpace,
               Epetra_RowMatrix* Matrix, bool Ownership = true,
               Teuchos::RCP<ML_Operator_Box> AuxOp = Teuchos::null)
  {
    StackPush();
    if (!Matrix) participate_ = false;
    else         participate_ = true;

    // these are outer spaces, all participate in their comm
    RangeSpace_ = RangeSpace;
    DomainSpace_ = DomainSpace;


#ifdef ML_MPI
    if (participate_)
    {
      // create an ML_Comm that still contains MPI_COMM_WORLD
      ML_Comm_Create(&mlcomm_);
      // have to use the comm from Matrix for the subset of procs here
      MPI_Comm mpicomm = dynamic_cast<const Epetra_MpiComm&>(Matrix->Comm()).GetMpiComm();
      ML_Comm_Set_UsrComm(mlcomm_,mpicomm);
      ML_Operator* Op = ML_Operator_Create(mlcomm_);

      RCPOperatorBox_ = Teuchos::rcp(new ML_Operator_Box(Op,true));
      RCPAuxOperatorBox_ = AuxOp;
      RCPRowMatrix_ = Teuchos::rcp(Matrix,Ownership);
      ML_Operator_WrapEpetraMatrix(RCPRowMatrix_.get(), GetML_Operator());
    }
#else
    ML_Operator* Op = ML_Operator_Create(MLAPI::GetML_Comm());
    RCPOperatorBox_ = Teuchos::rcp(new ML_Operator_Box(Op,true));
    RCPAuxOperatorBox_ = AuxOp;

    RCPRowMatrix_ = Teuchos::rcp(Matrix,Ownership);
    ML_Operator_WrapEpetraMatrix(RCPRowMatrix_.get(), GetML_Operator());
#endif

    StackPop();
  }

  // @}
  // @{ \name Overloaded operators

  //! Makes \c this object equivalent to \c RHS.
  LoadBalanceOperator& operator=(const LoadBalanceOperator& RHS)
  {
    StackPush();

    Destroy();

    participate_       = RHS.participate_;
    if (RHS.mlcomm_ && participate_)
    {
      ML_Comm_Create(&mlcomm_);
      ML_Comm_Set_UsrComm(mlcomm_,RHS.mlcomm_->USR_comm);
    }
    DomainSpace_    = RHS.GetDomainSpace();
    RangeSpace_     = RHS.GetRangeSpace();
    ColumnSpace_    = RHS.GetColumnSpace();
    RCPOperatorBox_ = RHS.GetRCPOperatorBox();
    RCPRowMatrix_   = RHS.GetRCPRowMatrix();

    SetLabel(RHS.GetLabel());

    StackPop();

    return(*this);
  }

  //! Sets the label of \c this object.
  inline Operator& operator=(const std::string& Label)
  {
    SetLabel(Label);
    return(*this);
  }

  // @}
  // @{ \name Get and Set methods

  //! Returns a bool indicating whether this proc participates in the operator application
  virtual inline bool GetParticipation() const {
    return(participate_);
  }

  //! Returns a reference to the internally stored domain space.
  const Space GetOperatorDomainSpace() const {
    return(DomainSpace_);
  }

  //! Returns a reference to the internally stored range space.
  const Space GetOperatorRangeSpace() const {
    return(RangeSpace_);
  }

  //! Returns a reference to the internally stored domain space.
  inline const Space GetDomainSpace() const {
    return(DomainSpace_);
  }

  //! Returns a reference to the internally stored range space.
  inline const Space GetRangeSpace() const {
    return(RangeSpace_);
  }

  //! Returns a reference to the internally stored column space.
  inline const Space GetColumnSpace() const
  {
    return(ColumnSpace_);
  }

  //! Returns the number of global rows.
  inline int GetNumGlobalRows() const
  {
    return(GetRangeSpace().GetNumGlobalElements());
  }

  //! Returns the number of local rows.
  inline int GetNumMyRows() const
  {
    return(GetRangeSpace().GetNumMyElements());
  }

  //! Returns the number of global columns.
  inline int GetNumGlobalCols() const
  {
    if (participate_) return(GetRowMatrix()->NumGlobalCols());
    else              return(0);
  }

  //! Returns the number of local columns.
  inline int GetNumMyCols() const
  {
    if (participate_) return(GetRowMatrix()->NumMyCols());
    else              return(0);
  }

  //! Returns the global number of nonzeros.
  inline int GetNumGlobalNonzeros() const
  {
    if (participate_) return(GetRowMatrix()->NumGlobalNonzeros());
    else              return(0);
  }

  //! Returns the local number of nonzeros.
  inline int GetNumMyNonzeros() const
  {
    if (participate_) return(GetRowMatrix()->NumMyNonzeros());
    else              return(0);
  }

  //! Returns the RefCountPtr of OperatorBox_.
  inline const Epetra_RowMatrix* GetRowMatrix() const
  {
    if (participate_) return(RCPRowMatrix_.get());
    else              return NULL;
  }

  //! Returns the RefCountPtr of OperatorBox_.
  inline ML_Operator* GetML_Operator() const
  {
    if (participate_) return(GetRCPOperatorBox()->GetData());
    else              return NULL;
  }

  //! Returns the RefCountPtr of OperatorBox_.
  inline const Teuchos::RCP<ML_Operator_Box>& GetRCPOperatorBox() const
  {
    return(RCPOperatorBox_);
  }

  //! Returns the RefCountPtr of AuxOperatorBox_.
  inline const Teuchos::RCP<ML_Operator_Box>& GetRCPAuxOperatorBox() const
  {
    return(RCPAuxOperatorBox_);
  }
  //! Returns the RefCountPtr of RowMatrix_
  inline const Teuchos::RCP<Epetra_RowMatrix>& GetRCPRowMatrix() const
  {
    return(RCPRowMatrix_);
  }

  //! Returns the global ID of local row ID \c LRID.
  int GetGRID(const int LRID) const
  {
#ifdef MLAPI_CHECK
    if (LRID < 0 || LRID >= GetNumMyRows())
      ML_THROW("LRID in invalid", -1);
#endif
    return(GetRangeSpace()(LRID));
  }

  //! Returns the global ID of local column ID \c LCID.
  int GetGCID(const int LCID) const
  {
#ifdef MLAPI_CHECK
    if (LCID < 0 || LCID >= GetRowMatrix()->NumMyCols())
      ML_THROW("LRID in invalid", -1);
#endif
    return(GetRowMatrix()->RowMatrixColMap().GID(LCID));
  }

  // @}
  // @{ \name Mathematical methods.

  //! Applies \c this operator to LHS, returns the result in \c RHS.
  int Apply(const MultiVector& X, MultiVector& Y) const
  {
    ResetTimer();
    StackPush();

    if (GetDomainSpace() != X.GetVectorSpace())
      ML_THROW("Domain spaces differ", -1);
    if (GetRangeSpace() != Y.GetVectorSpace())
      ML_THROW("Range spaces differ", -1);
    if (X.GetNumVectors() != Y.GetNumVectors())
      ML_THROW("Number of vectors differ", -1);

    if (participate_)
    {

      if (GetML_Operator() == 0)
        ML_THROW("Operator not set", -1);

      int (*func)(ML_Operator*,int,double*,int,double*) =
        GetML_Operator()->matvec->func_ptr;

      for (int v = 0 ; v < X.GetNumVectors() ; ++v) {
        double* x_ptr = (double*)&X(0) + v * X.GetMyLength();
        double* y_ptr = (double*)&Y(0) + v * Y.GetMyLength();
        (*func)(GetML_Operator(),X.GetMyLength(),x_ptr,
                Y.GetMyLength(), y_ptr);
      }
    }

    StackPop();

    UpdateFlops(2.0 * GetNumGlobalNonzeros());
    UpdateTime();

    return(0);
  }

  // @}
  // @{ \name Miscellaneous methods

  //! Prints basic information about \c this object.
  std::ostream& Print(std::ostream& os, const bool verbose = true) const
  {
    ML_THROW("Print(...) not implemented in MLAPI::LoadBalanceOperator",-1);
    if (GetRCPOperatorBox().get() == 0) {
      if (GetMyPID() == 0) {
        os << std::endl;
        os << "*** MLAPI::Operator ***" << std::endl;
        os << "Label  = " << GetLabel() << std::endl;
        os << "Status = empty" << std::endl;
        os << std::endl;
      }
      return(os);
    }

    StackPush();

    int    *bindx;
    double *val;
    int    allocated, row_length;
    ML_Operator* matrix = GetML_Operator();

    if (matrix->getrow == NULL)
      ML_THROW("getrow not set", -1);

    if (GetMyPID() == 0) {
      os << std::endl;
      os << "*** MLAPI::Operator ***" << std::endl;
      os << "Label             = " << GetLabel() << std::endl;
      os << "Number of rows    = " << GetRangeSpace().GetNumGlobalElements() << std::endl;
      os << "Number of columns = " << GetDomainSpace().GetNumGlobalElements() << std::endl;
      os << "Flop count        = " << GetFlops() << std::endl;
      os << "Cumulative time   = " << GetTime() << std::endl;
      if (GetTime() != 0.0)
        os << "MFlops rate       = " << 1.0e-6 * GetFlops() / GetTime() << std::endl;
      else
        os << "MFlops rate       = 0.0" << std::endl;
      os << std::endl;
    }

    if (!verbose)
      return(os);

    allocated = 100;
    bindx = (int    *)  ML_allocate(allocated*sizeof(int   ));
    val   = (double *)  ML_allocate(allocated*sizeof(double));

    if (GetMyPID() == 0) {
      os.width(10);
      os << "ProcID";
      os.width(20);
      os << "Global Row";
      os.width(20);
      os << "Global Col";
      os.width(20);
      os << "Value" << std::endl;
      os << std::endl;
    }

    for (int iproc = 0 ; iproc < GetNumProcs() ; ++iproc) {

      if (GetMyPID() == iproc) {

        for (int i = 0 ; i < matrix->getrow->Nrows; i++) {
          ML_get_matrix_row(matrix, 1, &i, &allocated, &bindx, &val,
                            &row_length, 0);
          for  (int j = 0; j < row_length; j++) {
            int GlobalRow = GetRangeSpace()(i);
            //int GlobalCol = GetColumnSpace()(bindx[j]);
            int GlobalCol = GetRowMatrix()->RowMatrixColMap().GID(bindx[j]);
            os.width(10);
            os << iproc;
            os.width(20);
            os << GlobalRow;
            os.width(20);
            os << GlobalCol;
            os.width(20);
            os << val[j] << std::endl;
          }
        }
      }
      Barrier();
    }

    if (GetMyPID() == 0)
      os << std::endl;

    Barrier();

    ML_free(val);
    ML_free(bindx);

    StackPop();

    return (os);
  }

  //! Build the column space, by computing the GID of all local columns.
  void BuildColumnSpace()
  {
    StackPush();

    if (participate_)
    {
      if (mlcomm_->ML_nprocs == 1) {
        ColumnSpace_ = DomainSpace_;
        return;
      }

      std::vector<double> dtemp;
      std::vector<int> GlobalElements;

      int Nrows = GetML_Operator()->getrow->Nrows;
      int Nghosts;
      if (GetML_Operator()->getrow->pre_comm == NULL) Nghosts = 0;
      else {
        if (GetML_Operator()->getrow->pre_comm->total_rcv_length <= 0)
          ML_CommInfoOP_Compute_TotalRcvLength(GetML_Operator()->getrow->pre_comm);
        Nghosts = GetML_Operator()->getrow->pre_comm->total_rcv_length;
      }

      dtemp.resize(Nrows + Nghosts);

      for (int i = 0 ; i < Nrows ; ++i)
        dtemp[i] = 1.0 * GetDomainSpace()(i);
      for (int i = 0 ; i < Nghosts; ++i)
        dtemp[i + Nrows] = -1;

      ML_exchange_bdry(&dtemp[0],GetML_Operator()->getrow->pre_comm,
                       GetML_Operator()->outvec_leng,
                       GetML_Comm(), ML_OVERWRITE,NULL);

      GlobalElements.resize(Nrows + Nghosts);

      for (int i = 0 ; i < Nrows + Nghosts ; ++i)
        GlobalElements[i] = (int)dtemp[i];

      ColumnSpace_.Reshape(-1, Nrows + Nghosts, &GlobalElements[0]);
    }

    StackPop();

    return;
  }

  // @}

private:

  //! Destroys all internal data and resets \c this object.
  void Destroy()
  {
    participate_ = true;
    if (mlcomm_) ML_Comm_Destroy(&mlcomm_);
    RangeSpace_.Reshape();
    DomainSpace_.Reshape();
    RCPOperatorBox_    = Teuchos::null;
    RCPRowMatrix_      = Teuchos::null;
    RCPAuxOperatorBox_ = Teuchos::null;
  }

  //! indicate whether I participate in this operator or not
  bool participate_;
  ML_Comm* mlcomm_;
  //! Domain space.
  Space DomainSpace_;
  //! Range space.
  Space RangeSpace_;
  //! Column space.
  Space ColumnSpace_;
  //! Container for the underlying ML_Operator pointer.
  Teuchos::RCP<ML_Operator_Box> RCPOperatorBox_;
  //! Container for the underlying ML_Operator pointer.
  Teuchos::RCP<ML_Operator_Box> RCPAuxOperatorBox_;
  //! Container for the underlying Epetra_RowMatrix pointer
  Teuchos::RCP<Epetra_RowMatrix> RCPRowMatrix_;

}; // Operator

} // namespace MLAPI

#endif // ML_OPERATOR_H