This file is indexed.

/usr/include/trilinos/ml_smoother.h is in libtrilinos-ml-dev 12.4.2-2.

This file is owned by root:root, with mode 0o644.

The actual contents of the file can be viewed below.

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
/* ******************************************************************** */
/* See the file COPYRIGHT for a complete copyright notice, contact      */
/* and disclaimer.                                                      */
/* ******************************************************************** */

/* ******************************************************************** */
/* Declaration of the ML_Smoother structure                             */
/* ******************************************************************** */
/* Author        : Charles Tong (LLNL) and Raymond Tuminaro (SNL)       */
/* Date          : March, 1999                                          */
/* ******************************************************************** */

#ifndef __MLSMOOTHER__
#define __MLSMOOTHER__

/* ******************************************************************** */
/* data structure type definition                                       */
/* ******************************************************************** */
typedef enum {ML_GS_standard=0,ML_GS_symmetric,ML_GS_efficient_symmetric} ML_GS_SWEEP_TYPE;
/* 0 - Standard G-S or Block G-S
   1 - Symmetric G-S or Block G-S
   2 - Efficient Symmetric G-S or Block G-S
   (i.e. pre=forward, post=backward) */


typedef struct ML_SmootherFunc_Struct ML_SmootherFunc;
typedef struct ML_Smoother_Struct ML_Smoother;
typedef struct ML_Sm_BGS_Data_Struct ML_Sm_BGS_Data;
typedef struct ML_Sm_ILUT_Data_Struct ML_Sm_ILUT_Data;
typedef struct ML_Sm_Hiptmair_Data_Struct ML_Sm_Hiptmair_Data;
typedef struct ML_Sm_BlockHiptmair_Data_Struct ML_Sm_BlockHiptmair_Data;

/* ******************************************************************** */
/* local include files                                                  */
/* ******************************************************************** */

#include "ml_common.h"
#include "ml_defs.h"
#include "ml_memory.h"
#include "ml_1level.h"
#include "ml_operator.h"
#include "ml_comminfoop.h"
#include "ml_csolve.h"
#include "ml_struct.h"
#include <math.h>

#ifdef WKC
#include <Epetra_MultiVector.h>
#endif

/* ******************************************************************** */
/* data definition for the ML_Smoother Class                            */
/* ******************************************************************** */
/* -------------------------------------------------------------------- */
/* These data structures define the smoother object.                    */
/* -------------------------------------------------------------------- */

struct ML_SmootherFunc_Struct
{
   int ML_id;
   int (*func_ptr)(ML_Smoother *, int, double *, int, double *);
   void *data;
};

/*******************************************************************************
   pre_or_post      flag that the smoother toggles to determine whether it is
                    in pre or post smoothing phase
   envelope         message-passing information that is used in
                    ML_exchange_bdry
*******************************************************************************/

struct ML_Smoother_Struct
{
   int                     ML_id;
   struct ML_1Level_Struct *my_level;
   int                     ntimes;
   int                     init_guess;
   double                  omega;
   double                  tol;
   ML_SmootherFunc         *smoother;
   void                    (*data_destroy)(void *);
   double                  build_time, apply_time;
   int                     times_applied;
   char                    *label;
   int                     pre_or_post;
   ML_Comm_Envelope        *envelope;
   int                     output_level;
   ML_GS_SWEEP_TYPE        gs_sweep_type;

};

struct ML_Sm_BGS_Data_Struct
{
   double ** blockfacts;
   int    ** perms;
   int    blocksize;
   int    *blocklengths;
   int    *blockmap;
   int    *blockOffset;
   int    Nblocks;
  int    optimized;
   double **trid_dl;
   double **trid_d;
   double **trid_du;
   double **trid_du2;
   int    **trid_ipiv;
};

struct ML_Sm_ILUT_Data_Struct
{
   int           Nrows;
   int           *mat_ia;
   int           *mat_ja;
   double        *mat_aa;
   ML_CommInfoOP *getrow_comm;
   int           fillin;
   double        threshold;
};
struct DinvA_widget {
  int ML_id;
  int (*func_ptr)(ML_Operator *, int, double *, int, double *);
  void *data;
  ML_Operator *Amat;
};

#ifdef out
#if defined(SUPERLU)
#include "dsp_defs.h"
#include "util.h"
#endif
#ifdef DSUPERLU
#include "mpi.h"
#include "superlu_ddefs.h"
#endif
typedef struct ML_Sm_Schwarz_Data_Struct ML_Sm_Schwarz_Data;

struct ML_Sm_Schwarz_Data_Struct
{
   int           Nrows;
   int           **bmat_ia;
   int           **bmat_ja;
   double        **bmat_aa;
   int           **aux_bmat_ia;
   int           **aux_bmat_ja;
   double        **aux_bmat_aa;
   ML_CommInfoOP *getrow_comm;
   int           nblocks;
   int           *blk_info;
   int           *blk_size;
   int           **blk_indices;
   int           **perm_r;
   int           **perm_c;
#if defined(SUPERLU)
   SuperMatrix   **slu_Amat;
   SuperMatrix   **slu_Lmat;
   SuperMatrix   **slu_Umat;
#endif
};
#endif

/*******************************************************************************
Hiptmair Smoother data structure
    sm_nodal    pointer to nodal smoother structure
    max_eig     eigenvalue calculated for damping parameter
    omega       damping parameter for edge and/or nodal smoother inside
                Hiptmair smoother
*******************************************************************************/

struct ML_Sm_Hiptmair_Data_Struct
{
   ML_Operator *Tmat;
   ML_Operator *Tmat_trans;
   ML_Operator *ATmat_trans;
   double      *TtAT_diag;
   ML_Operator *TtATmat;
   ML_Smoother *sm_nodal;
   double max_eig;
   double omega;
   double output_level;
   ML    *ml_nodal;
   ML    *ml_edge;
   int   reduced_smoother;
   int   external_TtATmat; /* Set if T^TAT is generated elsewhere */
};

#define FULL_HIPTMAIR 0
             /* smoothes on edges, nodes and then edges */

#define HALF_HIPTMAIR 1
             /* smoothes on edges then node for pre-smoothing */
             /* smoothes on nodes then edges fr post-smoothing */

/* for block hiptmair */

struct ML_Sm_BlockHiptmair_Data_Struct
{
   ML_Operator *Tmat;
   ML_Operator *Tmat_trans;
   ML_Operator *ATmat_trans;
   double      *TtAT_diag;
   ML_Operator *TtATmat;
   ML_Smoother *sm_nodal;
   double *res_edge;
   double *res_edge1;
   double *res_edge2;
   double *rhs_nodal1;
   double *rhs_nodal2;
   double *x_nodal1;
   double *x_nodal2;
   double *edge_update1;
   double *edge_update2;
   double max_eig;
   double omega;
   double output_level;
   ML    *ml_nodal;
   ML    *ml_edge;
   int   reduced_smoother;
};

/* ******************************************************************** */
/* ******************************************************************** */
/*      User Interface Proto-types                                      */
/* ******************************************************************** */
/* ******************************************************************** */

#ifndef ML_CPP
#ifdef __cplusplus
extern "C" {
#endif
#endif

extern  int ML_Smoother_Create(ML_Smoother **, ML_1Level *level_ptr );
extern  int ML_Smoother_Init(ML_Smoother *, ML_1Level *level_ptr);
extern  int ML_Smoother_Destroy(ML_Smoother **);
extern  int ML_Smoother_Clean(ML_Smoother *);
extern  int ML_Smoother_Set_Label( ML_Smoother *smoo, char *label);
extern  int ML_Smoother_Apply(ML_Smoother *,int,double *,int,double*,int);

#ifdef WKC
/* WKC Added proto for Epetra stuff! */
extern  int ML_Smoother_Apply(ML_Smoother *,int,Epetra_MultiVector &,
                              int,Epetra_MultiVector &,int);
#endif


extern  int ML_Smoother_Set(ML_Smoother *, void *,
                 int (*func_ptr)(ML_Smoother*,int,double*,int,double *),
                 int, double, char *);
extern  int ML_Smoother_Jacobi(ML_Smoother *, int, double *x, int, double *);
extern  int ML_Smoother_GaussSeidel(ML_Smoother *, int, double *, int, double *);
extern  int ML_Smoother_SGSSequential(ML_Smoother *, int,double *, int, double *);
extern  int ML_Smoother_SGS(ML_Smoother *, int, double *, int, double *);
extern  int ML_Smoother_BlockGS(ML_Smoother *, int, double *, int, double *);
extern int ML_Smoother_NewGS(ML_Smoother *sm,int inlen,double x[],int outlen,
                        double rhs[]);

extern int ML_BlockScaledApply(ML_Operator *Amat, int inlen, double in[],
			       int outlen, double out[]);

extern  int ML_Smoother_Cheby_Apply(ML_Smoother *, int, double *, int, double *);
extern int ML_Cheby(ML_Smoother *sm, int inlen, double x[], int outlen, double rhs[]);

#ifdef WKC
/* WKC -- double * are actually Epetra_MultiVectors */
/*extern int ML_Cheby_WKC(ML_Smoother *sm, int inlen, double *x, int outlen, double *rhs);*/
extern int ML_Cheby_WKC(void *sm, int inlen, double *x, int outlen, double *rhs);
#endif

extern int ML_complex_Cheby(ML_Smoother *sm, int inlen, double x[], int outlen,
			    double rhs[]);
extern int ML_DiagScaled_1stepKrylov(ML_Smoother *sm, int inlen, double x[],
				     int outlen, double rhs[]);
extern  int ML_Smoother_ParaSails(ML_Smoother *, int, double *, int, double *);
extern  int ML_Smoother_ParaSailsSym(ML_Smoother *, int, double *, int, double *);
extern  int ML_Smoother_ParaSailsTrans(ML_Smoother *, int, double *, int, double *);
extern  int ML_Smoother_VBlockJacobi(ML_Smoother *,int,double *x,int, double *);
extern  int ML_Smoother_LineJacobi(ML_Smoother *,int,double *x,int, double *);
extern  int ML_Smoother_LineGS(ML_Smoother *,int,double *x,int, double *);
extern  int ML_Smoother_VBlockKrylovJacobi(ML_Smoother *,int,double*,int,double*);
extern  int ML_Smoother_VBlockSGS(ML_Smoother *, int, double *x, int, double *);
extern  int ML_Smoother_VBlockSGSSequential(ML_Smoother*,int,double*,int,double*);
extern  int ML_Smoother_OverlappedILUT(ML_Smoother *,int,double *x,int,double *);
extern  int ML_Smoother_VBlockAdditiveSchwarz(ML_Smoother *,int,double*,int,double*);
extern  int ML_Smoother_VBlockMultiplicativeSchwarz(ML_Smoother *,int,double*,int,double*);
extern  int ML_Smoother_Hiptmair(ML_Smoother *, int, double *, int, double *);
extern  int ML_Smoother_BlockHiptmair(ML_Smoother *, int, double *, int, double *);
extern int ML_Smoother_ApplySubdomainOverlap(ML_Smoother *sm, int inlen,
					    double x[],int outlen, double b[]);
#ifdef HAVE_ML_PETSC
extern int ML_Smoother_Petsc(ML_Smoother *sm, int inlen, double x[], int outlen,
                      double rhs[]);
#endif

extern void ML_Smoother_DestroySubdomainOverlap(void *data);

extern int ML_EyeMinusIterationOperator_Matvec(ML_Operator *Amat, int ilen,
		       double p[], int olen, double ap[]);

extern int ML_Smoother_ComputeOmegaViaSpectralradius(ML_Operator *Amat,
    int (*smoothing_function)(ML_Smoother *, int, double *, int, double *),
    void *data, double *spectral_radius, double *omega);


/* ******************************************************************** */
/* ******************************************************************** */
/* private functions                                                   */
/* ******************************************************************** */
/* ******************************************************************** */

extern  int ML_Smoother_Create_Hiptmair_Data(ML_Sm_Hiptmair_Data **data);
extern  int ML_Smoother_Create_BlockHiptmair_Data(ML_Sm_BlockHiptmair_Data **data);
extern  int ML_Smoother_Gen_Hiptmair_Data(ML_Sm_Hiptmair_Data**,
                         ML_Operator*, ML_Operator*, ML_Operator*,
                         ML_Operator*, ML_Operator*, ML_Operator *,
                         int, int*, void *, void **, void *, void **);
extern  int ML_Smoother_Gen_BlockHiptmair_Data(ML_Sm_BlockHiptmair_Data**,
                         ML_Operator*, ML_Operator*, ML_Operator*,
                         ML_Operator*, int, int*, void *, void **,
					  void *, void **);
extern int ML_Smoother_HiptmairSubsmoother_Create(ML **ml_subproblem,
					   ML_Operator *Amat, void *smoother,
						  void **args, double default_omega);

extern void ML_Smoother_Destroy_Hiptmair_Data(void *data);
extern void ML_Smoother_Destroy_BlockHiptmair_Data(void *data);
extern  int ML_Smoother_Create_BGS_Data(ML_Sm_BGS_Data **data);
extern void ML_Smoother_Destroy_BGS_Data(void *data);
extern void ML_Smoother_Clean_BGS_Data(void *data);
extern  int ML_Smoother_Create_ILUT_Data(ML_Sm_ILUT_Data **data);
extern void ML_Smoother_Destroy_ILUT_Data(void *data);
extern  int ML_Smoother_Gen_BGSFacts(ML_Sm_BGS_Data **, ML_Operator *,int);
extern  int ML_Smoother_Gen_VBGSFacts(ML_Sm_BGS_Data**,ML_Operator*,int,int*);
extern  int ML_Smoother_Gen_LineSmootherFacts(ML_Sm_BGS_Data**, ML_Operator*, int, int*, int*);
extern void ML_Smoother_Destroy_Schwarz_Data(void *data);
extern void ML_Smoother_Clean_ParaSails(void *data);
extern struct MLSthing *ML_Smoother_Create_MLS(void);
extern int ML_BlockDinv(ML_Sm_BGS_Data *BGS_Data, int outlen, double out[]);

extern void ML_Smoother_Destroy_MLS(void *data);
extern void **ML_Smoother_Arglist_Create(int nargs);
extern int ML_Smoother_Arglist_Set(void **arglist, int which_arg, void *ptr);
extern void *ML_Smoother_Arglist_Get(void **arglist, int which_arg);
extern int ML_Smoother_Arglist_Delete(void ***arglist);
extern int ML_Smoother_Arglist_Nargs(void **arglist);



extern  int ML_Smoother_ILUTDecomposition(ML_Sm_ILUT_Data *, ML_Operator *,
                    ML_Comm *, int, int *,int*,double *,int *, int *,int);
#ifdef out
extern  int ML_Smoother_Create_Schwarz_Data(ML_Sm_Schwarz_Data **data);
extern  int ML_Smoother_VBlockSchwarzDecomposition(ML_Sm_Schwarz_Data *,
                    ML_Operator *, ML_Comm *, int, int *,int*,double *,int *,
                    int *,int);
#endif

extern  int ML_Smoother_GetOffProcRows(ML_CommInfoOP *, ML_Comm *,
                  ML_Operator *,int,int *,int,int *,int **,double **);
extern  int ML_Smoother_GetRowLengths(ML_CommInfoOP *, ML_Comm *,
                  ML_Operator *, int *, int **);
extern  int ML_Smoother_ComposeOverlappedMatrix(ML_Operator *, ML_Comm *,
                  int *, int **, int **, double **, int **, int **, int *);
extern  ML *ML_Smoother_Get_Hiptmair_nodal(ML *ml, int level, int);
extern  int ML_dgetrs_special(int blocksize, double *ablock, int *ipiv,
			      double *correc);
extern  int ML_dgetrs_trans_special(int blocksize, double *ablock, int *ipiv,
			      double *correc);
extern  int ML_permute_for_dgetrs_special(double *Z[], int Nblocks, int blocksize,
                               ML_Sm_BGS_Data *block_data_widget);


/* -------------------------------------------------------------------- */
/* Ray's functions                                                      */
/* -------------------------------------------------------------------- */

extern  int ML_MSR_SGSextra(ML_Smoother *, int , double *, int , double *);
extern void ML_MSR_GSextra_Clean(void *data);
extern  int ML_Smoother_BackGS(void *, int, double *, int, double *);
extern void ML_Smoother_Clean_OrderedSGS(void *data);
extern  int ML_Smoother_Gen_Ordering(ML_Operator *Amat, int **data_ptr);
extern  int ML_Smoother_OrderedSGS(ML_Smoother *sm,int inlen,double x[],int outlen,
                                   double rhs[]);
extern  int ML_Smoother_MSR_SGS(ML_Smoother *, int, double *, int, double *);
extern int ML_Smoother_MSR_SGSnodamping(ML_Smoother *,int ,double *,int , double *);
extern int ML_Smoother_MSR_GSforwardnodamping(void *sm,int inlen,double x[],
					      int outlen, double rhs[]);
extern int ML_Smoother_MSR_GSbackwardnodamping(void *sm,int inlen,double x[],
					       int outlen, double rhs[]);
extern int ML_Smoother_MSR_SGSdamping(void *,int ,double *,int , double *);
extern void ML_Smoother_Clean_MSR_GS(void *data);

extern int DinvA(ML_Operator *data,  int in, double p[], int out, double ap[]);


#ifndef ML_CPP
#ifdef __cplusplus
}
#endif
#endif
#endif