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/usr/include/trilinos/MueLu_PermutingSmoother_def.hpp is in libtrilinos-muelu-dev 12.4.2-2.

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// @HEADER
//
// ***********************************************************************
//
//        MueLu: A package for multigrid based preconditioning
//                  Copyright 2012 Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact
//                    Jonathan Hu       (jhu@sandia.gov)
//                    Andrey Prokopenko (aprokop@sandia.gov)
//                    Ray Tuminaro      (rstumin@sandia.gov)
//
// ***********************************************************************
//
// @HEADER
/*
 * MueLu_PermutingSmoother_def.hpp
 *
 *  Created on: Nov 28, 2012
 *      Author: wiesner
 */

#ifndef MUELU_PERMUTINGSMOOTHER_DEF_HPP
#define MUELU_PERMUTINGSMOOTHER_DEF_HPP

#include <Xpetra_Matrix.hpp>
#include <Xpetra_Vector.hpp>
#include <Xpetra_VectorFactory.hpp>
#include <Xpetra_MultiVector.hpp>
#include <Xpetra_MultiVectorFactory.hpp>

#include "MueLu_ConfigDefs.hpp"

#include "MueLu_PermutingSmoother_decl.hpp"
#include "MueLu_Level.hpp"
#include "MueLu_TrilinosSmoother.hpp"
#include "MueLu_IfpackSmoother.hpp"
#include "MueLu_Utilities.hpp"
#include "MueLu_PermutationFactory.hpp"
#include "MueLu_Monitor.hpp"

namespace MueLu {

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::PermutingSmoother(const std::string& mapName, const RCP<const FactoryBase>& mapFact, const std::string& type, const Teuchos::ParameterList& paramList, const LO& overlap, RCP<FactoryBase> permFact)
  : type_(type), overlap_(overlap), permQT_(Teuchos::null), permP_(Teuchos::null), diagScalingOp_(Teuchos::null)
  {
    this->SetParameterList(paramList);

    permFact_ = permFact;
    if (permFact_ == Teuchos::null) {
      RCP<PermutationFactory> newPermFact = Teuchos::rcp(new PermutationFactory());
      newPermFact->SetParameter("PermutationRowMapName",    Teuchos::ParameterEntry(mapName));
      newPermFact->SetFactory  ("PermutationRowMapFactory", mapFact);
      permFact_ = newPermFact;
    }

    // create internal smoother
    if (type_ == "ILU") {
#if defined(HAVE_MUELU_EPETRA) && defined(HAVE_MUELU_IFPACK)
      s_ = MueLu::GetIfpackSmoother<Scalar,LocalOrdinal,GlobalOrdinal,Node>(type_, this->GetParameterList(), overlap_);
#else
      TEUCHOS_TEST_FOR_EXCEPTION(true, Exceptions::RuntimeError, "MueLu::PermutingSmoother requires Epetra and Ifpack.");
#endif
    } else {
      s_ = Teuchos::rcp(new TrilinosSmoother(type_, this->GetParameterList(), overlap_));
    }
    TEUCHOS_TEST_FOR_EXCEPTION(s_ == Teuchos::null, Exceptions::RuntimeError, "");

    // Use permuted matrix A
    s_->SetFactory("A", permFact_);
  }

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::~PermutingSmoother() { }

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  void PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::DeclareInput(Level& currentLevel) const {
    currentLevel.DeclareInput("permP",       permFact_.get());
    currentLevel.DeclareInput("permQT",      permFact_.get());
    currentLevel.DeclareInput("permScaling", permFact_.get());

    s_->DeclareInput(currentLevel);
  }

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  void PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::Setup(Level& currentLevel) {
    FactoryMonitor monitor(*this, "Permuting Smoother", currentLevel);

    if (SmootherPrototype::IsSetup() == true)
      this->GetOStream(Warnings0) << "MueLu::PermutingSmoother::Setup(): Setup() has already been called" << std::endl;

    // extract information from level class
    permP_         = currentLevel.Get< RCP<Matrix> > ("permP",       permFact_.get());
    permQT_        = currentLevel.Get< RCP<Matrix> > ("permQT",      permFact_.get());
    diagScalingOp_ = currentLevel.Get< RCP<Matrix> > ("permScaling", permFact_.get());

    s_->Setup(currentLevel);

    SmootherPrototype::IsSetup(true);
  }

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  void PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::Apply(MultiVector& X, const MultiVector& B, bool InitialGuessIsZero) const {
    TEUCHOS_TEST_FOR_EXCEPTION(SmootherPrototype::IsSetup() == false, Exceptions::RuntimeError, "MueLu::PermutingSmoother::Apply(): Setup() has not been called");

    typedef Teuchos::ScalarTraits<Scalar> STS;

    Teuchos::RCP<MultiVector> Xtemp = MultiVectorFactory::Build(X.getMap(), 1, true);
    Xtemp->update(STS::one(), X, STS::zero());

    // TODO: unify scaling and left permutation operator
    Teuchos::RCP<MultiVector> Btemp  = MultiVectorFactory::Build(B.getMap(), 1, true);
    Teuchos::RCP<MultiVector> Btemp2 = MultiVectorFactory::Build(B.getMap(), 1, true);
    permP_->apply(B, *Btemp, Teuchos::NO_TRANS);                // apply permutation operator to rhs
    diagScalingOp_->apply(*Btemp, *Btemp2, Teuchos::NO_TRANS);  // apply scaling operator to rhs

    // apply smoother to permuted linear system
    s_->Apply(*Xtemp, *Btemp2, InitialGuessIsZero);

    // retransform smooth solution
    permQT_->apply(*Xtemp, X, Teuchos::NO_TRANS);
  }

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  RCP<MueLu::SmootherPrototype<Scalar, LocalOrdinal, GlobalOrdinal, Node> >
  PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::Copy() const {
    return rcp(new PermutingSmoother(*this));
  }

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  std::string PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::description() const {
    std::ostringstream out;
    out << SmootherPrototype::description();
    return out.str();
  }

  template <class Scalar,class LocalOrdinal, class GlobalOrdinal, class Node>
  void PermutingSmoother<Scalar, LocalOrdinal, GlobalOrdinal, Node>::print(Teuchos::FancyOStream &out, const VerbLevel verbLevel) const {
    MUELU_DESCRIBE;
    out0 << ""; // avoid warning
  }

} // namespace MueLu


#endif /* MUELU_PERMUTINGSMOOTHER_DEF_HPP */