/usr/include/trilinos/MueLu_ShiftedLaplacian_decl.hpp is in libtrilinos-muelu-dev 12.4.2-2.
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//
// ***********************************************************************
//
//        MueLu: A package for multigrid based preconditioning
//                  Copyright 2012 Sandia Corporation
//
// Under the terms of Contract DE-AC04-94AL85000 with Sandia Corporation,
// the U.S. Government retains certain rights in this software.
//
// Redistribution and use in source and binary forms, with or without
// modification, are permitted provided that the following conditions are
// met:
//
// 1. Redistributions of source code must retain the above copyright
// notice, this list of conditions and the following disclaimer.
//
// 2. Redistributions in binary form must reproduce the above copyright
// notice, this list of conditions and the following disclaimer in the
// documentation and/or other materials provided with the distribution.
//
// 3. Neither the name of the Corporation nor the names of the
// contributors may be used to endorse or promote products derived from
// this software without specific prior written permission.
//
// THIS SOFTWARE IS PROVIDED BY SANDIA CORPORATION "AS IS" AND ANY
// EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
// IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
// PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL SANDIA CORPORATION OR THE
// CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
// EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR
// PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
// LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING
// NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
// SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
//
// Questions? Contact
//                    Jeremie Gaidamour (jngaida@sandia.gov)
//                    Jonathan Hu       (jhu@sandia.gov)
//                    Ray Tuminaro      (rstumin@sandia.gov)
//
// ***********************************************************************
//
// @HEADER
#ifndef MUELU_SHIFTEDLAPLACIAN_DECL_HPP
#define MUELU_SHIFTEDLAPLACIAN_DECL_HPP
// Xpetra
#include <Xpetra_Matrix_fwd.hpp>
#include <Xpetra_VectorFactory_fwd.hpp>
#include <Xpetra_MultiVectorFactory_fwd.hpp>
#include <Xpetra_TpetraMultiVector.hpp>
// MueLu
#include "MueLu.hpp"
#include "MueLu_ConfigDefs.hpp"
#if defined(HAVE_MUELU_IFPACK2) and defined(HAVE_MUELU_TPETRA)
#include <MueLu_BaseClass.hpp>
#include <MueLu_CoalesceDropFactory_fwd.hpp>
#include <MueLu_CoupledAggregationFactory_fwd.hpp>
#include <MueLu_CoupledRBMFactory_fwd.hpp>
#include <MueLu_DirectSolver_fwd.hpp>
#include <MueLu_GenericRFactory_fwd.hpp>
#include <MueLu_Hierarchy_fwd.hpp>
#include <MueLu_Ifpack2Smoother_fwd.hpp>
#include <MueLu_PFactory_fwd.hpp>
#include <MueLu_PgPFactory_fwd.hpp>
#include <MueLu_RAPFactory_fwd.hpp>
#include <MueLu_RAPShiftFactory_fwd.hpp>
#include <MueLu_SaPFactory_fwd.hpp>
#include <MueLu_ShiftedLaplacian_fwd.hpp>
#include <MueLu_ShiftedLaplacianOperator.hpp>
#include <MueLu_SmootherFactory_fwd.hpp>
#include <MueLu_SmootherPrototype_fwd.hpp>
#include <MueLu_TentativePFactory_fwd.hpp>
#include <MueLu_TransPFactory_fwd.hpp>
#include <MueLu_UncoupledAggregationFactory_fwd.hpp>
#include <MueLu_Utilities_fwd.hpp>
// Belos
#include <BelosConfigDefs.hpp>
#include <BelosLinearProblem.hpp>
#include <BelosSolverFactory.hpp>
#include <BelosTpetraAdapter.hpp>
namespace MueLu {
  /*!
    @brief Shifted Laplacian Helmholtz solver
    This class provides a black box solver for indefinite Helmholtz problems.
    An AMG-Shifted Laplacian is used as a preconditioner for Krylov iterative
    solvers in Belos.
    @ingroup MueLuAdapters
  */
  template <class Scalar        = Xpetra::Matrix<>::scalar_type,
            class LocalOrdinal  = typename Xpetra::Matrix<Scalar>::local_ordinal_type,
            class GlobalOrdinal = typename Xpetra::Matrix<Scalar, LocalOrdinal>::global_ordinal_type,
            class Node          = typename Xpetra::Matrix<Scalar, LocalOrdinal, GlobalOrdinal>::node_type>
  class ShiftedLaplacian : public BaseClass {
#undef MUELU_SHIFTEDLAPLACIAN_SHORT
#include "MueLu_UseShortNames.hpp"
    typedef Tpetra::Vector<SC,LO,GO,NO>                  TVEC;
    typedef Tpetra::MultiVector<SC,LO,GO,NO>             TMV;
    typedef Tpetra::Operator<SC,LO,GO,NO>                OP;
    typedef Belos::LinearProblem<SC,TMV,OP>              LinearProblem;
    typedef Belos::SolverManager<SC,TMV,OP>              SolverManager;
    typedef Belos::SolverFactory<SC,TMV,OP>              SolverFactory;
  public:
  /*
    FIXME  26-June-2015 JJH:  This contructor is setting numerous defaults.  However, they don't match the defaults
    FIXME  int the method setParameters().  There also isn't any parameter validation that I can see.
  */
    //! Constructors
    ShiftedLaplacian():
      numPDEs_(1),
      Smoother_("schwarz"),
      Aggregation_("uncoupled"),
      Nullspace_("constant"),
      numLevels_(5),
      coarseGridSize_(100),
      omega_(2.0*M_PI),
      iters_(500),
      blksize_(1),
      tol_(1.0e-4),
      nsweeps_(5),
      ncycles_(1),
      cycles_(8),
      subiters_(10),
      option_(1),
      nproblems_(0),
      solverType_(1),
      restart_size_(100),
      recycle_size_(25),
      smoother_sweeps_(4),
      smoother_damping_((SC)1.0),
      krylov_type_(1),
      krylov_iterations_(5),
      krylov_preconditioner_(1),
      ilu_leveloffill_(5.0),
      ilu_abs_thresh_(0.0),
      ilu_rel_thresh_(1.0),
      ilu_diagpivotthresh_(0.1),
      ilu_drop_tol_(0.01),
      ilu_fill_tol_(0.01),
      ilu_relax_val_(1.0),
      ilu_rowperm_("LargeDiag"),
      ilu_colperm_("COLAMD"),
      ilu_drop_rule_("DROP_BASIC"),
      ilu_normtype_("INF_NORM"),
      ilu_milutype_("SILU"),
      schwarz_overlap_(0),
      schwarz_usereorder_(true),
      schwarz_combinemode_(Tpetra::ADD),
      schwarz_ordermethod_("rcm"),
      GridTransfersExist_(false),
      isSymmetric_(true)
    { }
    // Destructor
    virtual ~ShiftedLaplacian();
    // Parameters
    void setParameters(Teuchos::RCP< Teuchos::ParameterList > paramList);
    // Set matrices
    void setProblemMatrix(RCP<Matrix>& A);
    void setProblemMatrix(RCP< Tpetra::CrsMatrix<SC,LO,GO,NO> >& TpetraA);
    void setPreconditioningMatrix(RCP<Matrix>& P);
    void setPreconditioningMatrix(RCP< Tpetra::CrsMatrix<SC,LO,GO,NO> >& TpetraP);
    void setstiff(RCP<Matrix>& K);
    void setstiff(RCP< Tpetra::CrsMatrix<SC,LO,GO,NO> >& TpetraK);
    void setmass(RCP<Matrix>& M);
    void setmass(RCP< Tpetra::CrsMatrix<SC,LO,GO,NO> >& TpetraM);
    void setcoords(RCP<MultiVector>& Coords);
    void setNullSpace(RCP<MultiVector> NullSpace);
    void setLevelShifts(std::vector<Scalar> levelshifts);
    // initialize: set parameters and factories, construct
    // prolongation and restriction matrices
    void initialize();
    // setupFastRAP: setup hierarchy with
    // prolongators of the stiffness matrix
    // constant complex shifts
    void setupFastRAP();
    // setupSlowRAP: setup hierarchy with
    // prolongators of the stiffness matrix
    // variable complex shifts
    void setupSlowRAP();
    // setupNormalRAP: setup hierarchy with
    // prolongators of the preconditioning matrix
    void setupNormalRAP();
    // setupSolver: initialize Belos solver
    void setupSolver();
    // resetLinearProblem: for multiple frequencies;
    // reset the Belos operator if the frequency changes
    void resetLinearProblem();
    // Solve phase
    int solve(const RCP<TMV> B, RCP<TMV>& X);
    void multigrid_apply(const RCP<MultiVector> B,
			 RCP<MultiVector>& X);
    void multigrid_apply(const RCP<Tpetra::MultiVector<SC,LO,GO,NO> > B,
			 RCP<Tpetra::MultiVector<SC,LO,GO,NO> >& X);
    int GetIterations();
    double GetResidual();
    RCP<FactoryManager>               Manager_;
  private:
    // Problem options
    // numPDEs_ -> number of DOFs at each node
    int numPDEs_;
    // Multigrid options
    // numLevels_      -> number of Multigrid levels
    // coarseGridSize_ -> size of coarsest grid (if current level has less DOFs, stop coarsening)
    std::string Smoother_, Aggregation_, Nullspace_;
    int numLevels_, coarseGridSize_;
    // Shifted Laplacian/Helmholtz parameters
    double          omega_;
    std::vector<SC> levelshifts_;
    // Krylov solver inputs
    // iters  -> max number of iterations
    // tol    -> residual tolerance
    int    iters_, blksize_;
    double tol_;
    int    nsweeps_, ncycles_;
    int    cycles_, subiters_, option_, nproblems_, solverType_;
    int    restart_size_, recycle_size_;
    // Smoother parameters
    int    smoother_sweeps_;
    Scalar smoother_damping_;
    int    krylov_type_;
    int    krylov_iterations_;
    int    krylov_preconditioner_;
    double ilu_leveloffill_, ilu_abs_thresh_, ilu_rel_thresh_, ilu_diagpivotthresh_;
    double ilu_drop_tol_, ilu_fill_tol_, ilu_relax_val_;
    std::string ilu_rowperm_, ilu_colperm_, ilu_drop_rule_, ilu_normtype_, ilu_milutype_;
    int    schwarz_overlap_;
    bool   schwarz_usereorder_;
    Tpetra::CombineMode schwarz_combinemode_;
    std::string schwarz_ordermethod_;
    // flags for setup
    bool GridTransfersExist_;
    bool isSymmetric_;
    // Xpetra matrices
    // K_ -> stiffness matrix
    // M_ -> mass matrix
    // A_ -> Problem matrix
    // P_ -> Preconditioning matrix
    RCP<Matrix>                       K_, M_, A_, P_;
    RCP<MultiVector>                  Coords_, NullSpace_;
    // Multigrid Hierarchy
    RCP<Hierarchy>                    Hierarchy_;
    // Factories and prototypes
    RCP<TentativePFactory>            TentPfact_;
    RCP<PFactory>                     Pfact_;
    RCP<PgPFactory>                   PgPfact_;
    RCP<TransPFactory>                TransPfact_;
    RCP<GenericRFactory>              Rfact_;
    RCP<RAPFactory>                   Acfact_;
    RCP<RAPShiftFactory>              Acshift_;
    RCP<CoalesceDropFactory>          Dropfact_;
    RCP<CoupledAggregationFactory>    Aggfact_;
    RCP<UncoupledAggregationFactory>  UCaggfact_;
    RCP<SmootherPrototype>            smooProto_, coarsestSmooProto_;
    RCP<SmootherFactory>              smooFact_,  coarsestSmooFact_;
    Teuchos::ParameterList            coarsestSmooList_;
    std::string                       precType_;
    Teuchos::ParameterList            precList_;
    // Operator and Preconditioner
    RCP< MueLu::ShiftedLaplacianOperator<SC,LO,GO,NO> > MueLuOp_;
    RCP< Tpetra::CrsMatrix<SC,LO,GO,NO> >               TpetraA_;
    // Belos Linear Problem and Solver
    RCP<LinearProblem>                LinearProblem_;
    RCP<SolverManager>                SolverManager_;
    RCP<SolverFactory>                SolverFactory_;
    RCP<Teuchos::ParameterList>       BelosList_;
  };
}
#define MUELU_SHIFTEDLAPLACIAN_SHORT
#endif //if defined(HAVE_MUELU_IFPACK2) and defined(HAVE_MUELU_TPETRA)
#endif // MUELU_SHIFTEDLAPLACIAN_DECL_HPP
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